Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS00420 and MMJJ_RS00425 are separated by 185 nucleotidesMMJJ_RS00425 and MMJJ_RS00430 are separated by 28 nucleotidesMMJJ_RS00430 and MMJJ_RS00435 are separated by 14 nucleotidesMMJJ_RS00435 and MMJJ_RS00440 are separated by 80 nucleotides MMJJ_RS00420: MMJJ_RS00420 - CBS domain-containing protein, at 76,958 to 77,338 _RS00420 MMJJ_RS00425: MMJJ_RS00425 - hypothetical protein, at 77,524 to 77,916 _RS00425 MMJJ_RS00430: MMJJ_RS00430 - ribonuclease Z, at 77,945 to 78,871 _RS00430 MMJJ_RS00435: MMJJ_RS00435 - hypothetical protein, at 78,886 to 79,464 _RS00435 MMJJ_RS00440: MMJJ_RS00440 - selenide, water dikinase SelD, at 79,545 to 80,552 _RS00440
Group Condition MMJJ_RS00420 MMJJ_RS00425 MMJJ_RS00430 MMJJ_RS00435 MMJJ_RS00440
stress McCas_formate_complete deta nonoate 0.025 mM -0.1 -4.5 -2.5 -0.3 +1.0
nitrogen source H2 N-free with 10mM Ammonium chloride +0.2 -3.7 -2.3 +0.1 -0.2
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -0.6 -3.4 -1.3 -0.5 +0.0
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -1.1 -2.9 -1.8 -0.5 +0.8
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.0 -5.1 -0.8 +0.1 +0.3
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -0.4 -2.8 -1.3 +0.1 -1.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.6 -3.8 -2.3 +0.1 +0.2
nutrient t1 formate McAA B12 dropout +0.2 -4.6 -0.9 -0.1 +0.3
nitrogen source H2 N-free with 10mM D-glucosamine -0.4 -3.1 -2.2 +0.3 +0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.5 -3.4 -1.9 +0.1 +0.0
biofilm H2 pooled triplicate biofilm cells +0.7 -3.9 -0.3 -0.2 -0.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.3 -3.1 -2.0 +0.1 +0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.5 -3.5 -1.7 +0.2 -0.0
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.3 -1.8 -3.4 -0.1 +1.2
planktonic H2 pooled triplicate planktonic cells +0.8 -3.2 -1.2 -0.0 -0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +1.0 -4.2 -1.0 +0.0 +0.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.8 -3.7 -1.0 +0.1 +0.1
stress McCas_formate_complete Nitrofurantoin 0.025 mM -0.8 -1.6 -2.8 -0.8 +2.5
stress McCas_formate_complete deta nonoate 0.025 mM +0.5 -3.9 -0.7 -0.0 +0.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.7 -3.2 -1.6 +0.0 +0.8
stress McCas_formate_complete Rifampicin 0.25 mM -0.9 -1.2 -2.9 -0.2 +2.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +1.0 -2.6 -1.9 -0.0 +0.5
stress McCas_formate_complete Nitrofurantoin 0.025 mM -0.8 -1.2 -3.0 -0.5 +2.6
stress McCas_formate_complete Anhydrotetracycline 0.05 mM -0.3 -2.6 -1.7 +0.0 +2.2
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +0.3 -1.3 -3.0 +0.0 +2.5
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM +0.5 -0.8 -2.4 -0.3 +2.5
stress McCas_formate_complete Irgasan 0.0125 mM -0.5 +0.0 -2.4 -0.2 +2.8
stress McCas_formate_complete sodium bromide 125 mM +0.5 -0.9 -2.2 +0.0 +2.4
stress McCas_formate_complete silver chloride 0.125 mM +1.0 -1.8 -1.2 +0.1 +1.8
stress McCas_formate_complete Antimycin A 0.01 mM +0.3 -0.3 -2.2 +0.3 +2.4
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