Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS04180 and LRK53_RS04185 are separated by 227 nucleotidesLRK53_RS04185 and LRK53_RS04190 are separated by 15 nucleotidesLRK53_RS04190 and LRK53_RS04195 are separated by 49 nucleotidesLRK53_RS04195 and LRK53_RS04200 are separated by 78 nucleotides LRK53_RS04180: LRK53_RS04180 - ABC transporter ATP-binding protein, at 977,164 to 978,048 _RS04180 LRK53_RS04185: LRK53_RS04185 - dihydrolipoyllysine-residue acetyltransferase, at 978,276 to 979,691 _RS04185 LRK53_RS04190: LRK53_RS04190 - dihydrolipoyl dehydrogenase, at 979,707 to 981,521 _RS04190 LRK53_RS04195: LRK53_RS04195 - 4-hydroxy-tetrahydrodipicolinate reductase, at 981,571 to 982,371 _RS04195 LRK53_RS04200: LRK53_RS04200 - hypothetical protein, at 982,450 to 982,926 _RS04200
Group Condition LRK53_RS04180 LRK53_RS04185 LRK53_RS04190 LRK53_RS04195 LRK53_RS04200
nutrient defined media with D-Glucose -0.2 -2.2 -2.2 -0.0 -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.5 -2.6 -1.0 +0.1 -1.3
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -0.2 -1.7 -2.1 +0.2 -1.5
nutrient defined media with L-Serine +0.1 -2.3 -2.7 +0.0 -0.3
nutrient defined media with L-Serine +0.3 -2.4 -2.7 -0.1 -0.2
nutrient defined media with D-Glucose -0.2 -2.0 -2.4 +0.1 -0.4
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM -0.0 -2.0 -1.9 -0.1 -0.6
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -0.1 -2.1 -1.2 +0.1 -1.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.5 -1.4 -0.5 -0.1 -1.8
no stress control R2A_PIPES no stress control +0.2 -2.0 -2.2 +0.1 -0.3
pH pH4.8 -0.1 -1.7 -1.9 +0.1 -0.5
no stress control R2A_PIPES no stress control -0.1 -1.8 -1.5 +0.0 -0.4
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +0.2 -2.0 -1.6 +0.1 -0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.6 -1.1 -1.8 +0.1 -0.2
stress R2A_PIPES with Cobalt chloride 512 uM +0.2 -1.4 -2.0 +0.1 -0.2
pH pH5 +0.2 -2.2 -1.5 +0.2 +0.0
nutrient defined media with 20AA_mix +0.0 -1.9 -1.2 +0.2 -0.4
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.2 -1.5 -1.8 +0.2 -0.4
nldm low iron NLDM_defined low iron; midlog -0.2 -2.1 -1.5 +0.0 +0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.8 -1.4 -1.2 -0.1 +0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.2 -1.4 -1.4 -0.1 -0.4
stress R2A_PIPES with Cobalt chloride 1024 uM +0.1 -1.3 -1.9 -0.1 +0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.1 -1.3 -1.6 +0.2 -0.5
nutrient defined media with 20AA_mix +0.5 -1.5 -1.7 +0.2 -0.5
stress R2A_PIPES with Cobalt chloride 512 uM +0.2 -1.6 -1.7 +0.3 -0.1
nldm low iron NLDM_defined low iron; midlog -0.5 -1.5 -1.2 -0.1 +0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.3 -1.8 -1.7 +0.1 +1.1
nldm low iron NLDM_defined low iron; midlog +0.0 -1.9 -1.5 -0.1 +0.9
pH pH4.5 +0.4 -1.1 -1.8 +0.0 +0.7
nldm low p NLDM_defined low phosphorus; midlog -0.2 -1.1 -1.2 -0.2 +0.8
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