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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5308 and GFF5309 are separated by 2 nucleotides
GFF5309 and GFF5310 are separated by 190 nucleotides
GFF5310 and GFF5311 overlap by 1 nucleotides
GFF5311 and GFF5312 are separated by 727 nucleotides
GFF5308 - hypothetical protein, at 5,299,399 to 5,299,467
GFF5308
GFF5309 - Transposase, at 5,299,470 to 5,299,565
GFF5309
GFF5310 - TonB-dependent receptor, at 5,299,756 to 5,302,212
GFF5310
GFF5311 - Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) periplasmic (secreted in GramPositives), at 5,302,212 to 5,303,330
GFF5311
GFF5312 - TonB-dependent receptor, at 5,304,058 to 5,306,541
GFF5312
Group
Condition
GFF5308
GFF5309
GFF5310
GFF5311
GFF5312
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.1
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.1
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.3
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.1
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.2
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.2
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.3
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.3
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.3
+0.3
+0.3
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