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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4679 and GFF4680 overlap by 4 nucleotides
GFF4680 and GFF4681 are separated by 178 nucleotides
GFF4681 and GFF4682 are separated by 3 nucleotides
GFF4682 and GFF4683 are separated by 75 nucleotides
GFF4679 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 4,676,159 to 4,677,175
GFF4679
GFF4680 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 4,677,172 to 4,678,305
GFF4680
GFF4681 - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4), at 4,678,484 to 4,679,938
GFF4681
GFF4682 - hypothetical protein, at 4,679,942 to 4,682,323
GFF4682
GFF4683 - hypothetical protein, at 4,682,399 to 4,682,536
GFF4683
Group
Condition
GFF4679
GFF4680
GFF4681
GFF4682
GFF4683
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.2
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.4
+0.3
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.5
+0.4
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.3
+0.5
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.5
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.5
+0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.5
+0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.5
+0.6
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.5
+0.5
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.5
+0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.5
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.6
+0.6
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.6
+0.5
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.5
+0.5
+0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.6
+0.5
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.5
+0.5
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.4
+0.6
+0.5
N.D.
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