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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4548 and GFF4549 are separated by 53 nucleotides
GFF4549 and GFF4550 are separated by 87 nucleotides
GFF4550 and GFF4551 overlap by 8 nucleotides
GFF4551 and GFF4552 are separated by 5 nucleotides
GFF4548 - Permease of the drug/metabolite transporter (DMT) superfamily, at 4,539,500 to 4,540,405
GFF4548
GFF4549 - hypothetical protein, at 4,540,459 to 4,541,265
GFF4549
GFF4550 - hypothetical protein, at 4,541,353 to 4,542,078
GFF4550
GFF4551 - hypothetical protein, at 4,542,071 to 4,542,598
GFF4551
GFF4552 - Glycosyltransferase, at 4,542,604 to 4,543,827
GFF4552
Group
Condition
GFF4548
GFF4549
GFF4550
GFF4551
GFF4552
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.2
-0.6
-0.3
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.6
-0.2
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.4
-0.1
-0.3
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.3
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.2
-0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.2
-0.2
-0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
-0.2
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.1
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.0
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
-0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.2
-0.3
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.0
-0.2
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
-0.3
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.2
-0.2
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.2
-0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.0
+0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.0
-0.1
+0.0
+0.0
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