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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF398 and GFF399 are separated by 127 nucleotides
GFF399 and GFF400 are separated by 72 nucleotides
GFF400 and GFF401 are separated by 70 nucleotides
GFF401 and GFF402 are separated by 49 nucleotides
GFF398 - Threonyl-tRNA synthetase (EC 6.1.1.3), at 385,969 to 387,966
GFF398
GFF399 - Translation initiation factor 3, at 388,094 to 388,627
GFF399
GFF400 - Possible NADH oxidoreductase, at 388,700 to 389,812
GFF400
GFF401 - Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11), at 389,883 to 390,494
GFF401
GFF402 - hypothetical protein, at 390,544 to 390,837
GFF402
Group
Condition
GFF398
GFF399
GFF400
GFF401
GFF402
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.0
+0.0
-0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.5
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.1
-0.1
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.0
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.0
+0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.2
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.0
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.1
-0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
+0.1
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.0
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.0
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
+0.3
+0.1
+0.2
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