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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3729 and GFF3730 are separated by 43 nucleotides
GFF3730 and GFF3731 overlap by 4 nucleotides
GFF3731 and GFF3732 overlap by 4 nucleotides
GFF3732 and GFF3733 are separated by 1 nucleotides
GFF3729 - Flagellar motor switch protein FliG, at 3,772,888 to 3,773,904
GFF3729
GFF3730 - Flagellar assembly protein FliH, at 3,773,948 to 3,774,538
GFF3730
GFF3731 - Flagellum-specific ATP synthase FliI, at 3,774,535 to 3,775,863
GFF3731
GFF3732 - hypothetical protein, at 3,775,860 to 3,776,285
GFF3732
GFF3733 - hypothetical protein, at 3,776,287 to 3,778,446
GFF3733
Group
Condition
GFF3729
GFF3730
GFF3731
GFF3732
GFF3733
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.2
+0.3
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.0
+0.1
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.0
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.1
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.2
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.3
+0.1
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.3
+0.4
-0.1
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.3
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.3
+0.3
+0.5
+0.1
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