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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3600 and GFF3601 are separated by 76 nucleotides
GFF3601 and GFF3602 overlap by 29 nucleotides
GFF3602 and GFF3603 are separated by 193 nucleotides
GFF3603 and GFF3604 are separated by 14 nucleotides
GFF3600 - Tyrosyl-tRNA synthetase (EC 6.1.1.1), at 3,645,404 to 3,646,621
GFF3600
GFF3601 - hypothetical protein, at 3,646,698 to 3,647,054
GFF3601
GFF3602 - Potassium efflux system KefA protein / Small-conductance mechanosensitive channel, at 3,647,026 to 3,648,102
GFF3602
GFF3603 - DNA methylase, putative, at 3,648,296 to 3,648,628
GFF3603
GFF3604 - ATP-dependent DNA helicase RecG (EC 3.6.4.12), at 3,648,643 to 3,650,745
GFF3604
Group
Condition
GFF3600
GFF3601
GFF3602
GFF3603
GFF3604
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.3
-0.2
-1.3
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.2
-0.1
-0.5
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.4
-0.2
-0.2
-1.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.0
-0.5
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.4
+0.0
+0.1
-0.8
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.9
-0.1
+0.4
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
-0.2
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.1
+0.2
-0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.0
+0.2
-0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.3
+0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.2
+0.3
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.2
+0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.1
+0.0
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.0
-0.1
+0.5
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.1
+0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.1
+0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.1
+0.2
+0.2
+0.1
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