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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Number of genes on each side:
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3581 and GFF3582 are separated by 51 nucleotides
GFF3582 and GFF3583 are separated by 80 nucleotides
GFF3583 and GFF3584 are separated by 34 nucleotides
GFF3584 and GFF3585 are separated by 115 nucleotides
GFF3581 - hypothetical protein, at 3,628,230 to 3,629,099
GFF3581
GFF3582 - hypothetical protein, at 3,629,151 to 3,629,747
GFF3582
GFF3583 - hypothetical protein, at 3,629,828 to 3,630,124
GFF3583
GFF3584 - Phage lysozyme R (EC 3.2.1.17), at 3,630,159 to 3,630,599
GFF3584
GFF3585 - hypothetical protein, at 3,630,715 to 3,631,386
GFF3585
Group
Condition
GFF3581
GFF3582
GFF3583
GFF3584
GFF3585
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
+0.0
-0.7
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.2
-0.7
-0.6
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
-0.8
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.4
-0.4
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.3
-0.3
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.4
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
-0.2
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
-0.3
-0.7
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
-0.4
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
-0.5
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
-0.2
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
-0.2
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.0
+0.0
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.1
-0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
-0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
-0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.4
+0.0
-0.1
+0.0
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