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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3528 and GFF3529 are separated by 677 nucleotides
GFF3529 and GFF3530 are separated by 210 nucleotides
GFF3530 and GFF3531 are separated by 17 nucleotides
GFF3531 and GFF3532 are separated by 174 nucleotides
GFF3528 - TPR repeat protein, at 3,573,698 to 3,574,078
GFF3528
GFF3529 - Uncharacterized NRDE family protein, at 3,574,756 to 3,575,520
GFF3529
GFF3530 - hypothetical protein, at 3,575,731 to 3,576,072
GFF3530
GFF3531 - hypothetical protein, at 3,576,090 to 3,577,487
GFF3531
GFF3532 - hypothetical protein, at 3,577,662 to 3,578,117
GFF3532
Group
Condition
GFF3528
GFF3529
GFF3530
GFF3531
GFF3532
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.3
+0.2
-0.4
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
-0.5
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.1
-0.1
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.3
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.4
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.2
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.0
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.1
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.1
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.1
-0.0
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.2
+0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.2
+0.2
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
+0.0
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.0
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.1
+0.1
-0.0
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