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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3396 and GFF3397 are separated by 196 nucleotides
GFF3397 and GFF3398 are separated by 108 nucleotides
GFF3398 and GFF3399 overlap by 4 nucleotides
GFF3399 and GFF3400 overlap by 4 nucleotides
GFF3396 - hypothetical protein, at 3,439,004 to 3,440,620
GFF3396
GFF3397 - hypothetical protein, at 3,440,817 to 3,442,688
GFF3397
GFF3398 - L-lactate permease, at 3,442,797 to 3,444,464
GFF3398
GFF3399 - Lactate-responsive regulator LldR in Enterobacteria, GntR family, at 3,444,461 to 3,445,285
GFF3399
GFF3400 - L-lactate dehydrogenase, at 3,445,282 to 3,446,415
GFF3400
Group
Condition
GFF3396
GFF3397
GFF3398
GFF3399
GFF3400
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.4
+0.9
+0.6
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.8
+0.5
+0.8
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.5
+0.8
+0.5
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.7
+0.6
+0.7
+0.6
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.7
+0.4
+0.8
+0.5
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.7
+0.5
+0.8
+0.4
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.7
+0.3
+0.7
+0.6
+0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.7
+0.5
+0.7
+0.7
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.6
+0.5
+0.8
+0.7
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.7
+0.5
+0.8
+0.7
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.7
+0.6
+0.8
+0.7
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.8
+0.6
+0.7
+0.7
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.7
+0.5
+0.8
+0.5
+0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.7
+0.6
+0.8
+0.8
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.7
+0.5
+0.8
+0.6
+0.8
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.8
+0.6
+0.9
+0.7
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.8
+0.7
+0.8
+0.7
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.8
+0.5
+0.9
+0.8
+0.7
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