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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. DMC3
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2478 and GFF2479 are separated by 43 nucleotides
GFF2479 and GFF2480 are separated by 91 nucleotides
GFF2480 and GFF2481 are separated by 90 nucleotides
GFF2481 and GFF2482 are separated by 1 nucleotides
GFF2478 - Motility protein B, at 266,212 to 267,102
GFF2478
GFF2479 - Sporulation initiation inhibitor protein Soj, at 267,146 to 267,934
GFF2479
GFF2480 - hypothetical protein, at 268,026 to 268,979
GFF2480
GFF2481 - Chemotaxis protein CheW, at 269,070 to 269,555
GFF2481
GFF2482 - hypothetical protein, at 269,557 to 269,952
GFF2482
Group
Condition
GFF2478
GFF2479
GFF2480
GFF2481
GFF2482
carbon source
D-Glucose (C)
-0.6
+0.2
+0.0
+0.1
+0.5
carbon source
D-Glucose and D,L-Lactate (C)
-0.2
+0.3
-0.1
-0.0
+0.8
mixed community
Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane
-0.4
+0.6
+0.0
+0.1
+0.6
carbon source
D-Glucose and D,L-Lactate (C)
+0.0
+0.2
-0.2
+0.1
+0.9
carbon source
D,L-Lactate (C)
-0.2
+0.3
-0.1
+0.3
+0.7
carbon source
D-Glucose and D,L-Lactate (C)
+0.1
+0.3
-0.0
+0.1
+0.7
carbon source
D-Glucose (C)
-0.2
+0.2
+0.3
+0.3
+0.7
carbon source
D-Glucose (C)
+0.4
+0.2
+0.1
+0.2
+0.4
carbon source
D-Glucose and casaminos (C)
-0.3
+0.5
+0.1
+0.4
+0.8
carbon source
D,L-Lactate and casaminos (C)
+0.3
+0.3
-0.0
+0.1
+0.8
carbon source
D,L-Lactate and casaminos (C)
+0.3
+0.3
-0.1
+0.3
+0.8
carbon source
D-Glucose and casaminos (C)
-0.0
+0.4
-0.0
+0.1
+1.1
carbon source
D-Glucose and casaminos (C)
+0.2
+0.5
-0.0
+0.3
+0.7
mixed community
Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane
-0.3
+0.5
+0.3
+0.6
+0.6
carbon source
D,L-Lactate (C)
+0.4
+0.4
-0.2
+0.1
+1.0
carbon source
D,L-Lactate and casaminos (C)
+0.3
+0.3
+0.2
+0.3
+0.7
mixed community
Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane
-0.2
+0.6
+0.0
+0.5
+0.9
carbon source
D,L-Lactate (C)
-0.0
+0.7
+0.3
+0.3
+1.0
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