Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2522 and Psest_2523 are separated by 48 nucleotidesPsest_2523 and Psest_2524 are separated by 63 nucleotidesPsest_2524 and Psest_2525 are separated by 13 nucleotidesPsest_2525 and Psest_2526 are separated by 92 nucleotides Psest_2522: Psest_2522 - PAS domain S-box, at 2,702,083 to 2,703,651 _2522 Psest_2523: Psest_2523 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 2,703,700 to 2,704,392 _2523 Psest_2524: Psest_2524 - cytochrome c oxidase, cbb3-type, subunit I, at 2,704,456 to 2,705,880 _2524 Psest_2525: Psest_2525 - cytochrome c oxidase, cbb3-type, subunit II, at 2,705,894 to 2,706,505 _2525 Psest_2526: Psest_2526 - cytochrome c oxidase, cbb3-type, subunit III, at 2,706,598 to 2,707,533 _2526
Group Condition Psest_2522 Psest_2523 Psest_2524 Psest_2525 Psest_2526
stress Chlorate 75 mM -0.3 -1.1 -0.4 -2.3 -2.5
stress Def Chlorate 20 mM +0.2 -0.2 -0.3 -2.1 -1.8
stress Def Chlorate 40 mM +0.1 -0.5 -0.1 -2.1 -1.5
temperature LB 30C timecourse1 timepoint 3 -0.5 -0.4 -1.1 -0.8 -0.9
stress Def Carbenicillin 0.008 mg/ml -0.4 -0.8 -0.8 -0.6 -0.2
temperature LB 30C timecourse2 timepoint 1 -0.4 -0.4 -0.4 -1.0 -0.4
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.3 +0.3 -0.0 -1.1 -0.8
anaerobic Nitrate/ lactate media with Nitrate 250mM +0.2 -0.7 +0.3 -1.1 -0.0
stress Chloride 200 mM -0.4 -0.8 -0.3 -0.4 +0.5
stress Doxycycline hyclate 0.0002 mg/ml +0.2 -0.4 -0.3 -0.9 +0.4
nutrient Min media with glucose +2.1 -0.5 -0.3 -1.4 -0.7
carbon source propionate (C) +0.4 +0.0 +0.4 -0.9 -0.7
carbon source L-tyrosine (C) +0.2 -0.3 +0.6 -0.9 -0.1
vitamin No vitamins t2 +1.7 -0.4 -0.1 -0.6 -0.8
RCH2 grown on a colony of Serratia +0.2 +0.6 +0.4 -1.1 -0.1
stress Cephalothin 0.04 mg/ml -0.3 -0.6 -0.3 +1.1 +0.1
RCH2 grown on a colony of 8R2A +0.2 +0.5 +0.3 -1.4 +0.5
vitamin With vitamins t2 +1.2 -0.3 -0.1 +0.1 -0.5
nutrient L-Histidine +1.5 -0.0 +0.0 -0.1 -1.0
nutrient L-tyrosine +1.4 -0.3 +0.4 -0.8 -0.2
vitamin No vitamins t1 +1.8 -0.5 +0.0 +0.1 -0.7
nutrient L-Histidine +1.6 +0.1 -0.2 -0.6 -0.2
nutrient L-tyrosine +1.5 -0.5 +0.0 +0.6 -0.7
carbon source propionate (C) +0.2 +1.2 +0.1 -0.6 +0.2
stress Thallium(I) acetate 0.1 mg/ml +0.0 -0.4 -0.2 +0.7 +0.9
vitamin With vitamins t1 +1.4 -0.4 -0.1 +0.3 -0.1
stress Def Polymyxin B sulfate 0.00008 mg/ml -0.2 -0.2 -0.1 +1.0 +0.6
stress Gentamicin 0.0016 mg/ml -0.3 -0.1 -0.2 +1.5 +0.8
stress Def Polymyxin B sulfate 0.0001 mg/ml -0.1 +0.2 +0.2 +1.0 +0.7
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 -0.3 +0.5 +1.0 +0.7
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