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Gene
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Cofit
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1874 and GFF1875 are separated by 159 nucleotides
GFF1875 and GFF1876 are separated by 63 nucleotides
GFF1876 and GFF1877 are separated by 173 nucleotides
GFF1877 and GFF1878 are separated by 36 nucleotides
GFF1874 - hypothetical protein, at 1,902,074 to 1,903,222
GFF1874
GFF1875 - Ribonuclease BN, at 1,903,382 to 1,904,287
GFF1875
GFF1876 - tRNA-Trp-CCA, at 1,904,351 to 1,904,426
GFF1876
GFF1877 - Protein translocase subunit SecE, at 1,904,600 to 1,904,803
GFF1877
GFF1878 - Transcription antitermination protein NusG, at 1,904,840 to 1,905,376
GFF1878
Group
Condition
GFF1874
GFF1875
GFF1876
GFF1877
GFF1878
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
N.D.
N.D.
N.D.
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