Fitness for 5 genes in Pseudomonas sp. DMC3

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Top 18 experiments (either direction), sorted by average fitness

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500 ntGFF1810 and GFF1811 overlap by 1 nucleotidesGFF1811 and GFF1812 are separated by 37 nucleotidesGFF1812 and GFF1813 are separated by 58 nucleotidesGFF1813 and GFF1814 are separated by 75 nucleotides GFF1810 - Cell shape-determining protein MreC, at 20,780 to 21,853 GFF1810 GFF1811 - Rod shape-determining protein MreD, at 21,853 to 22,344 GFF1811 GFF1812 - dTTP/UTP pyrophosphatase, at 22,382 to 22,978 GFF1812 GFF1813 - Ribonuclease G, at 23,037 to 24,494 GFF1813 GFF1814 - hypothetical protein, at 24,570 to 28,373 GFF1814
Group Condition GFF1810 GFF1811 GFF1812 GFF1813 GFF1814
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane N.D. -3.6 +0.2 +0.7 -0.6
carbon source D,L-Lactate and casaminos (C) N.D. -2.0 -0.0 -0.6 +0.0
carbon source D-Glucose and casaminos (C) N.D. -1.9 -0.3 -0.1 -0.1
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane N.D. -2.3 +0.3 +0.6 -0.8
carbon source D,L-Lactate and casaminos (C) N.D. -1.6 +0.2 -0.3 -0.5
carbon source D-Glucose and D,L-Lactate (C) N.D. -0.7 +0.2 -1.3 -0.3
carbon source D-Glucose (C) N.D. -0.6 +0.3 -1.2 -0.4
carbon source D-Glucose and casaminos (C) N.D. -1.7 +0.3 -0.5 +0.0
carbon source D-Glucose (C) N.D. -0.5 +0.1 -1.2 -0.2
carbon source D,L-Lactate and casaminos (C) N.D. -1.7 +0.1 -0.1 -0.2
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane N.D. -1.5 -0.3 +0.4 -0.4
carbon source D-Glucose and D,L-Lactate (C) N.D. -0.2 +0.2 -1.2 -0.4
carbon source D,L-Lactate (C) N.D. -1.6 +0.5 -0.3 -0.1
carbon source D-Glucose and D,L-Lactate (C) N.D. -0.6 +0.5 -1.3 +0.1
carbon source D-Glucose (C) N.D. -0.9 +0.7 -0.6 -0.2
carbon source D,L-Lactate (C) N.D. -0.6 +0.2 -0.5 -0.0
carbon source D-Glucose and casaminos (C) N.D. -1.0 +0.4 -0.1 -0.1
carbon source D,L-Lactate (C) N.D. -0.7 +0.5 -0.5 -0.0
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