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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1776 and GFF1777 overlap by 4 nucleotides
GFF1777 and GFF1778 are separated by 113 nucleotides
GFF1778 and GFF1779 are separated by 169 nucleotides
GFF1779 and GFF1780 are separated by 1 nucleotides
GFF1776 - hypothetical protein, at 1,803,217 to 1,803,423
GFF1776
GFF1777 - Gene Transfer Agent (GTA) ORFG06, at 1,803,420 to 1,803,953
GFF1777
GFF1778 - Gene Transfer Agent capsid protein; Phage major capsid protein, at 1,804,067 to 1,805,185
GFF1778
GFF1779 - hypothetical protein, at 1,805,355 to 1,806,023
GFF1779
GFF1780 - hypothetical protein, at 1,806,025 to 1,806,354
GFF1780
Group
Condition
GFF1776
GFF1777
GFF1778
GFF1779
GFF1780
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
-0.2
-0.6
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.2
+0.2
-0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.1
-0.2
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
-0.2
-0.3
-0.0
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
+0.0
-0.1
-0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.3
-0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.3
-0.3
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.2
+0.0
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.2
-0.0
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
-0.3
+0.0
-0.5
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.0
+0.0
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.3
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
-0.0
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
+0.1
+0.1
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
+0.1
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
-0.2
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.2
-0.0
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
-0.1
-0.0
-0.0
-0.1
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