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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_1396 and Psest_1397 are separated by 36 nucleotides
Psest_1397 and Psest_1398 overlap by 56 nucleotides
Psest_1398 and Psest_1399 are separated by 4 nucleotides
Psest_1399 and Psest_1400 are separated by 50 nucleotides
Psest_1396: Psest_1396 - Cytosine/adenosine deaminases, at 1,504,675 to 1,505,145
_1396
Psest_1397: Psest_1397 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 1,505,182 to 1,506,018
_1397
Psest_1398: Psest_1398 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 1,505,963 to 1,506,766
_1398
Psest_1399: Psest_1399 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 1,506,771 to 1,507,748
_1399
Psest_1400: Psest_1400 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 1,507,799 to 1,508,548
_1400
Group
Condition
Psest
_1396
Psest
_1397
Psest
_1398
Psest
_1399
Psest
_1400
nitrogen source
L-Isoleucine (N)
-0.7
-1.4
-0.2
-0.8
-0.7
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.4
-0.9
-0.1
-0.5
-0.8
RCH2 grown on a colony of N2F3
-0.4
-1.1
-0.5
-0.4
-0.0
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.5
-1.6
+0.2
-0.3
+0.0
nitrogen source
nitrite (N)
-0.5
-1.6
-0.1
-0.1
+0.3
stress
Choline Lysine 20 mM
+0.0
-1.5
-0.6
-0.1
+0.1
stress
Carbenicillin 0.008 mg/ml
-0.2
-1.7
+0.4
-0.1
-0.1
stress
Benzethonium chloride 0.01 mM
-0.4
-1.2
-0.1
+0.2
+0.1
anaerobic
nitrate reduction - anaerobic
-0.3
-1.0
+0.2
-0.5
+0.2
stress
Vanillin 2 mM
+0.2
-1.3
+0.2
-0.4
+0.3
RCH2 grown on a colony of 8R2A
-0.8
-0.8
+0.3
-0.1
+0.4
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.2
-1.3
+0.4
-0.3
+0.1
stress
methylglyoxal 0.0016 vol%
-0.0
-0.4
-1.0
+0.2
+0.4
stress
Lomefloxacin 0.0001 mM
+0.0
-1.6
+0.5
+0.3
+0.1
RCH2 grown on a colony of Serratia
+0.1
-0.8
+1.0
+0.0
-0.9
stress
nitrate 250 mM
-0.6
-0.2
+0.8
-0.2
+0.4
stress
Cephalothin 0.04 mg/ml
-0.5
-0.3
+0.6
-0.0
+0.6
stress
Gentamicin 0.0016 mg/ml
+0.1
-0.8
+0.4
+0.4
+0.4
stress
Cobalt chloride 0.05 mM
+0.5
+1.0
-0.3
-0.2
-0.0
stress
Spectinomycin 0.00625 mg/ml
+0.3
-0.4
+0.5
+0.4
+0.3
nitrogen source
L-Glutamic (N)
-0.4
+0.5
+0.8
+0.5
+0.4
stress
Aluminum chloride 0.3 mM
+0.3
+0.7
+0.5
+0.3
+0.2
stress
benzoic 0.4 mg/ml
+0.5
+0.6
+0.2
+0.4
+0.3
stress
Nalidixic 0.00390625 mg/ml
+0.3
-0.4
+2.1
-0.3
+0.4
stress
Nickel (II) chloride 0.8 mM
+0.4
+0.7
+0.7
+0.3
+0.1
stress
Def Carbenicillin 0.008 mg/ml
+0.0
-0.1
+0.7
+0.7
+1.0
lb
LB
+0.4
+0.2
+0.6
+0.6
+0.7
RCH2 grown on a colony of N2C3
+0.3
+0.7
+0.9
+0.4
+0.3
stress
Def Carbenicillin 0.02 mg/ml
+1.0
-0.6
+1.0
+0.8
+0.5
stress
perchlorate 25 mM
+0.5
+0.9
+0.7
+0.5
+0.4
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