Fitness for 5 genes in Pseudomonas sp. DMC3

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Top 18 experiments (either direction), sorted by average fitness

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500 ntGFF1357 and GFF1358 are separated by 244 nucleotidesGFF1358 and GFF1359 are separated by 128 nucleotidesGFF1359 and GFF1360 are separated by 14 nucleotidesGFF1360 and GFF1361 are separated by 359 nucleotides GFF1357 - Inner membrane protein YbjJ, at 117,660 to 118,811 GFF1357 GFF1358 - Diaminopimelate epimerase, at 119,056 to 120,036 GFF1358 GFF1359 - Cytosine deaminase, at 120,165 to 121,400 GFF1359 GFF1360 - Cytosine permease, at 121,415 to 122,686 GFF1360 GFF1361 - 6-carboxy-5,6,7,8-tetrahydropterin synthase, at 123,046 to 123,402 GFF1361
Group Condition GFF1357 GFF1358 GFF1359 GFF1360 GFF1361
carbon source D,L-Lactate and casaminos (C) +0.3 -0.4 -0.2 +0.0 -0.5
carbon source D-Glucose and casaminos (C) +0.3 -0.3 -0.1 +0.1 -0.6
carbon source D,L-Lactate (C) -0.1 -1.1 +0.3 -0.1 +0.2
carbon source D,L-Lactate (C) -0.1 -0.1 +0.0 -0.1 -0.0
carbon source D,L-Lactate and casaminos (C) +0.1 +0.0 -0.2 -0.1 -0.3
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane -0.0 -0.4 +0.3 -0.1 +0.1
carbon source D,L-Lactate and casaminos (C) +0.2 +0.3 -0.2 +0.0 -0.5
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane -0.1 -0.4 +0.1 +0.1 +0.6
carbon source D-Glucose (C) +0.1 -0.2 +0.2 +0.0 +0.1
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane +0.1 +0.0 +0.0 +0.0 +0.1
carbon source D-Glucose and D,L-Lactate (C) -0.0 -0.1 +0.1 +0.1 +0.3
carbon source D-Glucose and D,L-Lactate (C) +0.1 +0.3 -0.1 -0.1 +0.1
carbon source D-Glucose (C) +0.2 -0.2 -0.0 +0.0 +0.5
carbon source D-Glucose and casaminos (C) +0.2 -0.1 +0.0 +0.0 +0.3
carbon source D-Glucose and casaminos (C) +0.4 -0.1 +0.1 -0.0 +0.2
carbon source D-Glucose (C) +0.2 -0.4 +0.2 +0.0 +0.5
carbon source D-Glucose and D,L-Lactate (C) -0.2 +0.4 +0.5 -0.0 +0.1
carbon source D,L-Lactate (C) +0.0 +0.2 +0.4 -0.0 +0.3
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