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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1005 and GFF1006 are separated by 108 nucleotides
GFF1006 and GFF1007 are separated by 29 nucleotides
GFF1007 and GFF1008 overlap by 4 nucleotides
GFF1008 and GFF1009 are separated by 46 nucleotides
GFF1005 - hypothetical protein, at 1,004,101 to 1,006,533
GFF1005
GFF1006 - hypothetical protein, at 1,006,642 to 1,008,156
GFF1006
GFF1007 - hypothetical protein, at 1,008,186 to 1,009,376
GFF1007
GFF1008 - hypothetical protein, at 1,009,373 to 1,010,338
GFF1008
GFF1009 - Transcriptional regulator, LacI family, at 1,010,385 to 1,011,434
GFF1009
Group
Condition
GFF1005
GFF1006
GFF1007
GFF1008
GFF1009
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.2
-0.1
-0.4
-0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.2
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.2
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
-0.0
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.0
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.0
+0.0
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.0
+0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
-0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
+0.1
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
-0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
+0.2
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
+0.1
+0.0
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