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Cofit
Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS23315 and BWI76_RS23320 are separated by 23 nucleotides
BWI76_RS23320 and BWI76_RS23325 are separated by 19 nucleotides
BWI76_RS23325 and BWI76_RS23330 are separated by 94 nucleotides
BWI76_RS23330 and BWI76_RS23335 overlap by 40 nucleotides
BWI76_RS23315: BWI76_RS23315 - acyl-[ACP]--phospholipid O-acyltransferase, at 4,862,058 to 4,864,217
_RS23315
BWI76_RS23320: BWI76_RS23320 - hypothetical protein, at 4,864,241 to 4,864,432
_RS23320
BWI76_RS23325: BWI76_RS23325 - hypothetical protein, at 4,864,452 to 4,864,745
_RS23325
BWI76_RS23330: BWI76_RS23330 - transcriptional regulator GalR, at 4,864,840 to 4,865,856
_RS23330
BWI76_RS23335: BWI76_RS23335 - GNAT family acetyltransferase, at 4,865,817 to 4,866,296
_RS23335
Group
Condition
BWI76
_RS23315
BWI76
_RS23320
BWI76
_RS23325
BWI76
_RS23330
BWI76
_RS23335
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-2.1
+0.3
-5.9
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.9
-0.6
-6.0
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.5
-0.4
-1.3
-5.0
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.1
+0.1
-6.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-2.0
+1.6
-5.5
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.7
-0.2
-5.2
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
+0.1
+0.9
-6.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.3
-0.7
+0.5
-5.9
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+1.1
+1.1
-0.4
-7.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.4
-0.2
-0.5
-5.3
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
-0.6
-0.1
-4.3
-0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-0.3
+0.2
-4.6
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.5
-0.4
-4.7
+0.0
carbon source
L-Sorbose (C)
+0.3
+1.0
+0.0
-5.3
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.4
-0.4
+0.6
-3.7
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
+0.5
+0.3
-4.3
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.0
+0.9
+0.3
-4.9
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
+0.6
-0.3
+0.8
-5.6
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.3
-0.2
+0.1
-4.4
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.4
+0.3
-4.2
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.6
+1.2
-4.6
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.9
-0.3
-0.0
-4.1
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.3
+0.5
-4.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
+0.3
+0.2
-3.9
-0.3
agar plate interaction
Taped volatile agar plate with Trichoderma atroviridae IMI
-0.6
+1.2
-0.4
-2.3
-0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.9
+0.7
-3.0
+0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
+5.2
-0.4
-2.7
-0.2
stress
Cobalt chloride 0.5 mM
+0.6
+2.1
+0.7
-1.8
+0.2
phage
KLEB29 MOI 1
+0.1
-0.3
-0.8
+3.7
-0.3
phage
K. M5a1 KLEB26 MOI 0.1
+0.2
+0.1
+0.2
+7.1
+0.1
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