Fitness for 5 genes in Klebsiella michiganensis M5al

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 610 experiments or choose conditions or try the comparative fitness browser

500 ntBWI76_RS22320 and BWI76_RS22325 are separated by 17 nucleotidesBWI76_RS22325 and BWI76_RS22330 are separated by 2 nucleotidesBWI76_RS22330 and BWI76_RS22335 overlap by 4 nucleotidesBWI76_RS22335 and BWI76_RS22340 are separated by 82 nucleotides BWI76_RS22320: BWI76_RS22320 - hydrogenase 3 large subunit, at 4,652,151 to 4,653,860 _RS22320 BWI76_RS22325: BWI76_RS22325 - hydrogenase 3 membrane subunit, at 4,653,878 to 4,654,801 _RS22325 BWI76_RS22330: BWI76_RS22330 - formate hydrogenlyase subunit 3, at 4,654,804 to 4,656,630 _RS22330 BWI76_RS22335: BWI76_RS22335 - 4Fe-4S ferredoxin, at 4,656,627 to 4,657,235 _RS22335 BWI76_RS22340: BWI76_RS22340 - formate hydrogenlyase regulatory protein HycA, at 4,657,318 to 4,657,767 _RS22340
Group Condition BWI76_RS22320 BWI76_RS22325 BWI76_RS22330 BWI76_RS22335 BWI76_RS22340
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.2 -0.8 -0.5 -0.4 -0.5
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL -0.0 -1.6 +0.1 -0.1 -0.4
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.1 -0.6 -0.5 -0.3 -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.1 -0.6 -0.3 -0.6 -0.3
ecofab LB in EcoFAB_3.5mL with sand -0.4 -0.4 +0.1 -0.2 -0.5
phage K. M5a1 KLEB26 MOI 0.1 +0.1 -0.6 -0.2 -0.6 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -0.3 -0.8 -0.5 +0.5
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days +0.2 -0.4 -0.5 -0.3 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.3 +0.1 -0.3 -0.6 -0.7
nitrogen source L-Arginine (N) +0.3 -0.9 +0.4 -0.1 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 -0.9 +0.2 -0.2 +0.2
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.5 +0.3 -0.8 -0.3 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.4 -0.1 +0.6 -0.5 -0.8
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB +0.4 -0.3 +0.3 -0.2 -0.6
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.4 +0.8 -0.6 -0.4 +0.3
carbon source Gly-Glu (C) +0.1 -0.5 -0.4 +0.8 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.1 +0.1 -0.1 +0.9 -0.7
phage KLEB1 MOI 10 +0.5 -0.2 -0.5 +0.0 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.2 +0.3 +0.7 -0.2
phage K. M5a1 KLEB23 MOI 10 -0.0 +0.3 -0.6 +0.3 +0.5
phage B3 MOi 10 +0.5 -0.5 +0.3 +0.4 -0.1
phage KLEB29 MOI 1 +0.3 -0.8 +0.1 +0.7 +0.3
phage KLEB20 MOI 0.1 +0.1 +0.3 +0.5 +0.5 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -0.1 -0.0 +0.2 +1.2
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.1 +0.4 +0.4 +0.2 +0.7
nitrogen source Cytosine (N) +0.1 +0.4 +0.7 +0.4 -0.0
nitrogen source L-Phenylalanine (N) +0.1 +0.6 +0.1 +0.6 +0.2
phage KLEB17 MOI 0.1 +0.3 +0.6 +0.5 +0.1 +0.2
phage K. M5a1 KLEB10 MOI 10 +0.3 +0.6 +0.3 +0.4 +0.3
nitrogen source nitrate (N) +0.4 +0.6 +0.5 +0.3 +0.5
remove
BWI76_RS22320
plot
remove
BWI76_RS22325
plot
remove
BWI76_RS22330
remove
BWI76_RS22335
plot
remove
BWI76_RS22340
plot