Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Klebsiella michiganensis M5al
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 610 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
BWI76_RS22320 and BWI76_RS22325 are separated by 17 nucleotides
BWI76_RS22325 and BWI76_RS22330 are separated by 2 nucleotides
BWI76_RS22330 and BWI76_RS22335 overlap by 4 nucleotides
BWI76_RS22335 and BWI76_RS22340 are separated by 82 nucleotides
BWI76_RS22320: BWI76_RS22320 - hydrogenase 3 large subunit, at 4,652,151 to 4,653,860
_RS22320
BWI76_RS22325: BWI76_RS22325 - hydrogenase 3 membrane subunit, at 4,653,878 to 4,654,801
_RS22325
BWI76_RS22330: BWI76_RS22330 - formate hydrogenlyase subunit 3, at 4,654,804 to 4,656,630
_RS22330
BWI76_RS22335: BWI76_RS22335 - 4Fe-4S ferredoxin, at 4,656,627 to 4,657,235
_RS22335
BWI76_RS22340: BWI76_RS22340 - formate hydrogenlyase regulatory protein HycA, at 4,657,318 to 4,657,767
_RS22340
Group
Condition
BWI76
_RS22320
BWI76
_RS22325
BWI76
_RS22330
BWI76
_RS22335
BWI76
_RS22340
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
-0.2
-0.8
-0.5
-0.4
-0.5
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
-0.0
-1.6
+0.1
-0.1
-0.4
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
-0.1
-0.6
-0.5
-0.3
-0.4
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB
-0.1
-0.6
-0.3
-0.6
-0.3
ecofab
LB in EcoFAB_3.5mL with sand
-0.4
-0.4
+0.1
-0.2
-0.5
phage
K. M5a1 KLEB26 MOI 0.1
+0.1
-0.6
-0.2
-0.6
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.3
-0.3
-0.8
-0.5
+0.5
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days
+0.2
-0.4
-0.5
-0.3
-0.2
mixed community
RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.3
+0.1
-0.3
-0.6
-0.7
nitrogen source
L-Arginine (N)
+0.3
-0.9
+0.4
-0.1
-0.3
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.2
-0.9
+0.2
-0.2
+0.2
mixed community
LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
+0.5
+0.3
-0.8
-0.3
-0.2
mixed community
RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.4
-0.1
+0.6
-0.5
-0.8
rhizosphere
rhizosphere EcoFAB sample 3; outgrowth in LB
+0.4
-0.3
+0.3
-0.2
-0.6
micoeukaryotes
Tetrahymena sp., Mixed culture-1
-0.4
+0.8
-0.6
-0.4
+0.3
carbon source
Gly-Glu (C)
+0.1
-0.5
-0.4
+0.8
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.1
+0.1
-0.1
+0.9
-0.7
phage
KLEB1 MOI 10
+0.5
-0.2
-0.5
+0.0
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.2
+0.3
+0.7
-0.2
phage
K. M5a1 KLEB23 MOI 10
-0.0
+0.3
-0.6
+0.3
+0.5
phage
B3 MOi 10
+0.5
-0.5
+0.3
+0.4
-0.1
phage
KLEB29 MOI 1
+0.3
-0.8
+0.1
+0.7
+0.3
phage
KLEB20 MOI 0.1
+0.1
+0.3
+0.5
+0.5
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.2
-0.1
-0.0
+0.2
+1.2
micoeukaryotes
Dictyostellum sp.mixed culture-2
-0.1
+0.4
+0.4
+0.2
+0.7
nitrogen source
Cytosine (N)
+0.1
+0.4
+0.7
+0.4
-0.0
nitrogen source
L-Phenylalanine (N)
+0.1
+0.6
+0.1
+0.6
+0.2
phage
KLEB17 MOI 0.1
+0.3
+0.6
+0.5
+0.1
+0.2
phage
K. M5a1 KLEB10 MOI 10
+0.3
+0.6
+0.3
+0.4
+0.3
nitrogen source
nitrate (N)
+0.4
+0.6
+0.5
+0.3
+0.5
remove
BWI76_RS22320
plot
remove
BWI76_RS22325
plot
remove
BWI76_RS22330
remove
BWI76_RS22335
plot
remove
BWI76_RS22340
plot