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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS03240 and BWI76_RS03245 are separated by 0 nucleotides
BWI76_RS03245 and BWI76_RS03250 are separated by 2 nucleotides
BWI76_RS03250 and BWI76_RS03255 are separated by 419 nucleotides
BWI76_RS03255 and BWI76_RS03260 are separated by 20 nucleotides
BWI76_RS03240: BWI76_RS03240 - maltodextrin ABC transporter permease, at 668,332 to 669,165
_RS03240
BWI76_RS03245: BWI76_RS03245 - maltodextrin ABC transporter permease, at 669,166 to 670,449
_RS03245
BWI76_RS03250: BWI76_RS03250 - maltose ABC transporter substrate-binding protein, at 670,452 to 671,681
_RS03250
BWI76_RS03255: BWI76_RS03255 - hypothetical protein, at 672,101 to 673,141
_RS03255
BWI76_RS03260: BWI76_RS03260 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 673,162 to 674,169
_RS03260
Group
Condition
BWI76
_RS03240
BWI76
_RS03245
BWI76
_RS03250
BWI76
_RS03255
BWI76
_RS03260
carbon source
a-Cyclodextrin (C)
-2.8
-2.6
-2.9
-1.9
-2.1
carbon source
a-Cyclodextrin (C)
-2.7
-2.7
-2.6
-1.7
-2.5
rhizosphere
rhizosphere EcoFAB sample 3; outgrowth in LB
-0.7
-1.3
-0.9
-1.1
-1.0
rhizosphere
rhizosphere sample 1; outgrowth in LB
-1.2
-0.6
-0.3
-0.5
-0.4
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.4
-0.5
-0.5
-0.5
-1.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.6
-0.6
-0.5
-0.7
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.2
-0.7
-0.6
-0.7
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.3
-0.6
-0.5
-0.5
-0.9
mixed community
RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.2
-0.7
-0.4
-0.8
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-1.0
-0.4
-0.4
-0.3
-0.5
phage
KLEB15 MOI 1
-0.7
-0.4
-0.4
-0.6
-0.4
mixed community
RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.6
-0.5
-0.5
-0.3
-0.7
mixed community
RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.2
-0.5
-0.5
-0.8
-0.5
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.1
-0.7
-0.3
-0.7
-1.0
stress
Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
-0.5
-0.5
-0.4
-0.6
-0.5
exudates
RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
-0.5
-0.4
-0.3
-0.6
-0.7
mixed community
RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.3
-0.6
-0.5
-0.5
-0.7
mixed community
RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.4
-0.5
-0.4
-0.6
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.5
-0.5
-0.3
-0.5
-0.6
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
-0.6
-0.5
-0.4
-0.5
-0.4
mixed community
RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.4
-0.6
-0.4
-0.6
-0.5
carbon source
RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 0.1 x
-0.4
-0.6
-0.5
-0.4
-0.6
stress
Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
-0.5
-0.5
-0.4
-0.5
-0.6
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.4
-0.6
-0.3
-0.5
-0.6
stress
Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
-0.6
-0.4
-0.4
-0.5
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.3
-0.5
-0.5
-0.4
-0.6
mixed community
RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.4
-0.4
-0.5
-0.4
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.3
-0.4
-0.5
-0.6
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.4
-0.5
-0.4
-0.5
-0.5
mixed community
RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
-0.5
-0.4
-0.3
-0.5
-0.5
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