Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS01610	BWI76_RS01615	BWI76_RS01620	BWI76_RS01625	BWI76_RS01630
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-7.6	-7.2	+0.6	N.D.	-1.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-4.1	-5.5	+0.2	N.D.	-5.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	-4.8	-8.0	-0.2	N.D.	-2.0
nitrogen source	Cytosine (N)	-6.5	-5.1	-0.3	N.D.	-2.6
nitrogen source	Uridine (N)	-6.9	-5.6	-0.6	N.D.	-1.1
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	-5.6	-6.5	-0.2	N.D.	-1.5
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	-5.3	-7.9	+0.3	N.D.	-0.8
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-5.3	-7.5	+0.2	N.D.	-1.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-6.6	-6.7	+0.2	N.D.	-0.5
nitrogen source	Uridine (N)	-2.8	-6.1	+0.2	N.D.	-4.7
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-5.1	-7.0	-0.1	N.D.	-1.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-7.1	-6.2	-0.0	N.D.	+0.0
carbon source	RCH2_defined_glucose with MS_media 0.5x	-6.0	-6.1	-0.1	N.D.	-1.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-5.6	-6.4	+0.3	N.D.	-1.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	-6.0	-6.9	+0.0	N.D.	-0.3
nitrogen source	L-Asparagine (N)	-6.8	-6.4	-0.1	N.D.	+0.2
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-5.4	-7.2	+0.1	N.D.	-0.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 83.25 mM	-5.7	-6.1	-0.0	N.D.	-1.3
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-5.7	-7.0	-0.0	N.D.	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-4.9	-7.4	-0.2	N.D.	-0.4
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	-6.4	-5.9	+0.6	N.D.	-1.2
nitrogen source	L-Cysteine (N)	-6.3	-5.9	-0.6	N.D.	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-5.9	-6.5	+0.2	N.D.	-0.4
nitrogen source	nitrate (N)	-7.5	-5.4	+0.2	N.D.	+0.3
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.5x	-5.8	-5.5	+0.3	N.D.	-1.3
nitrogen source	Cytidine (N)	-7.3	-5.7	+0.1	N.D.	+0.6
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM	-5.3	-6.1	+0.4	N.D.	-1.3
nitrogen source	L-Arginine (N)	-4.6	-7.1	+0.7	N.D.	-1.2
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	-5.9	-5.8	+0.1	N.D.	+1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-4.7	-6.0	+0.7	N.D.	+1.9