Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6059	Atu6060	Atu6061	Atu6062	Atu6063
carbon source	Dextrin from potato starch (C)	-0.0	-0.1	-0.3	-0.5	-0.2
carbon source	Rhamnogalacturonan - from potato (C)	-0.3	-0.0	-0.1	-0.5	-0.1
nitrogen source	D-Glucosamine Hydrochloride (N)	-0.4	-0.2	-0.2	-0.1	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.1	-0.1	-0.1	-0.3	-0.3
nitrogen source	Hydantoin (N)	-0.3	-0.0	+0.1	-0.4	-0.1
phage	AgroPhage_D10	-0.0	+0.1	-0.1	-0.5	-0.1
carbon source	D-Saccharic potassium salt (C)	+0.4	-0.3	-0.1	-0.1	-0.4
phage	phage 100.2	-0.1	-0.2	+0.2	-0.4	+0.1
nitrogen source	Betaine (N)	+0.0	-0.2	+0.1	-0.4	+0.1
nitrogen source	5-Aminolevulinic (N)	+0.0	+0.2	+0.2	-0.3	-0.2
nitrogen source	L-Glutamic (N)	+0.1	-0.3	-0.2	+0.2	+0.0
nitrogen source	spermidine (N)	+0.2	-0.2	-0.0	+0.2	-0.3
carbon source	Dextrin from potato starch (C)	+0.2	-0.3	-0.0	+0.3	-0.1
nitrogen source	L-Isoleucine (N)	-0.1	-0.2	-0.1	+0.4	+0.1
nitrogen source	spermidine (N)	+0.2	-0.3	-0.3	+0.4	-0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.3	+0.0	+0.1	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.1	+0.0	+0.5	+0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.1	+0.1	-0.3	+0.4	+0.1
carbon source	Rhamnogalacturonan - from potato (C)	-0.2	-0.0	+0.3	+0.4	-0.2
nitrogen source	L-Histidine (N)	+0.1	-0.0	-0.2	+0.4	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.1	+0.2	+0.4	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+0.0	+0.0	+0.5	+0.1
nitrogen source	L-Methionine (N)	+0.2	+0.2	-0.0	+0.3	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.1	+0.0	+0.6	+0.1
phage	phage 100.3	+0.1	-0.1	+0.1	+0.4	+0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.1	+0.2	+0.1	+0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.0	-0.1	+0.5	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3	-0.0	-0.0	+0.3	+0.1
nitrogen source	Putrescine (N)	+0.1	+0.4	-0.0	+0.5	-0.1
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.1	+0.3	+0.1	+0.3	+0.0