Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2819 and Atu2821 are separated by 302 nucleotidesAtu2821 and Atu2822 are separated by 42 nucleotidesAtu2822 and Atu2823 are separated by 84 nucleotidesAtu2823 and Atu2824 are separated by 152 nucleotides Atu2819: Atu2819 - ABC transporter, nucleotide binding/ATPase protein (ribose), at 2,822,157 to 2,823,674 Atu2819 Atu2821: Atu2821 - transcriptional regulator, GntR family, at 2,823,977 to 2,824,669 Atu2821 Atu2822: Atu2822 - D-galactarate dehydratase, at 2,824,712 to 2,826,244 Atu2822 Atu2823: Atu2823 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 2,826,329 to 2,827,945 Atu2823 Atu2824: Atu2824 - hypothetical protein, at 2,828,098 to 2,829,738 Atu2824
Group Condition Atu2819 Atu2821 Atu2822 Atu2823 Atu2824
carbon source L-Galactose (C) -4.4 -1.5 -2.0 N.D. -0.2
carbon source L-Galactose (C) -4.0 -1.5 -2.0 N.D. -0.2
carbon source D-Arabinose (C) -2.4 -1.4 -3.4 N.D. -0.4
carbon source D-Arabinose (C) -2.5 -1.0 -3.3 N.D. -0.1
stress R2A with m-arsenite 0.8 mM +0.0 -4.8 -0.1 N.D. +0.3
stress R2A with m-arsenite 0.8 mM -0.3 -4.9 +0.1 N.D. +0.7
stress R2A with Vancomycin 0.009 mM +0.0 -1.1 +0.1 N.D. -3.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 -0.0 N.D. -3.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -2.3 -0.3 N.D. -0.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.8 -0.1 N.D. -3.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.8 +0.2 N.D. -1.9
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -2.4 +0.0 N.D. -0.9
carbon source D-Galacturonic Acid (C) +0.1 -2.8 -0.2 N.D. -0.3
carbon source L-Xylose (C) +0.0 -1.8 -1.2 N.D. +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -2.3 +0.1 N.D. -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.9 +0.2 N.D. -1.2
stress R2A with Magnesium sulfate 400 mM -0.0 +0.1 -0.2 N.D. -2.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 -2.1 +0.0 N.D. -0.6
carbon source L-Xylose (C) -0.1 -1.5 -1.1 N.D. +0.1
carbon source D-Galacturonic Acid (C) +0.1 -2.1 -0.4 N.D. -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -1.1 -0.1 N.D. -1.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.2 N.D. -3.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.8 +0.2 N.D. -1.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.7 +0.2 N.D. -0.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.1 +0.3 N.D. -1.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.3 N.D. -3.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.4 +0.3 N.D. -1.1
stress R2A with nitrate 375 mM +0.0 +2.1 +0.1 N.D. -0.6
carbon source D-Ribose (C) -0.2 +4.8 +2.7 N.D. +0.2
carbon source D-Ribose (C) -0.1 +5.0 +2.8 N.D. +0.2
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