Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1003 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1535 and Atu1536 are separated by 12 nucleotidesAtu1536 and Atu1537 are separated by 10 nucleotidesAtu1537 and Atu1539 are separated by 345 nucleotidesAtu1539 and Atu1540 overlap by 4 nucleotides Atu1535: Atu1535 - cytochrome c oxidase, FixQ chain, at 1,525,991 to 1,526,143 Atu1535 Atu1536: Atu1536 - cytochrome C oxidase, FixO chain, at 1,526,156 to 1,526,887 Atu1536 Atu1537: Atu1537 - cytochrome-c oxidase, FixN chain, at 1,526,898 to 1,528,520 Atu1537 Atu1539: Atu1539 - sulfate permease, at 1,528,866 to 1,530,479 Atu1539 Atu1540: Atu1540 - hypothetical protein, at 1,530,476 to 1,531,093 Atu1540
Group Condition Atu1535 Atu1536 Atu1537 Atu1539 Atu1540
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -2.4 -1.5 -1.9 -0.3 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -2.3 -1.6 -2.0 -0.1 -0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -2.0 -1.9 -1.2 -0.1 -0.0
lb_arabidopsis_root LB_Arabidopsis_root -2.4 -1.5 -1.2 +0.0 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -2.3 -1.2 -1.1 -0.1 -0.1
no phage P1L5 -1.9 -1.7 -1.7 +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -2.2 -1.1 -1.3 +0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -2.3 -1.0 -1.0 -0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.4 -1.3 -1.6 +0.0 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.3 -1.5 -1.4 -0.1 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.8 -1.1 -1.3 +0.1 -0.1
lb_arabidopsis_leaf LB_arabidopsis_leaf -1.6 -1.5 -1.3 +0.3 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -2.3 -0.9 -0.6 -0.1 -0.2
phage AgroPhage_H03 -1.2 -1.9 -0.7 -0.0 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.4 -1.1 -1.4 -0.1 +0.1
lb_tomato_root LB_Tomato_root -1.9 -0.8 -0.7 +0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.2 -1.4 -1.1 +0.2 +0.0
no phage P3L5 -1.7 -0.9 -1.0 +0.2 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.4 -1.3 -0.9 +0.2 +0.1
no phage P5L5 -1.3 -1.1 -1.0 +0.2 +0.1
no phage P2L5 -1.9 -0.4 -0.7 +0.8 +0.0
phage AgroPhage_F10 -0.9 +2.3 +1.6 -0.1 -0.3
stress Chloramphenicol 12.5 ug/mL +1.0 +1.3 +1.1 -0.3 -0.1
stress Chloramphenicol 12.5 ug/mL +1.7 +1.0 +1.1 +0.1 -0.2
nophagecontrol No phage control +1.7 +0.9 +1.0 -0.1 +0.1
nophagecontrol No phage control +0.9 +2.0 +1.3 -0.2 -0.2
stress R2A with m-arsenite 0.8 mM +1.5 +1.2 +1.5 +0.1 -0.0
stress R2A with m-arsenite 0.8 mM +1.6 +1.8 +1.4 +0.1 -0.1
phage AgroPhage_C04 +2.1 +3.4 +3.1 -0.4 -0.3
phage AgroPhage_C10 +3.1 +3.2 +2.7 +0.3 -0.3
remove
Atu1535
plot		 remove
Atu1536
plot		 remove
Atu1537		 remove
Atu1539
plot		 remove
Atu1540
plot