Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1317 and Atu1318 are separated by 126 nucleotidesAtu1318 and Atu1319 are separated by 56 nucleotidesAtu1319 and Atu1320 are separated by 20 nucleotidesAtu1320 and Atu1321 are separated by 66 nucleotides Atu1317: Atu1317 - metal dependent hydrolase, at 1,307,339 to 1,308,439 Atu1317 Atu1318: Atu1318 - glutamyl-tRNA-Gln-amidotransferase chain C, at 1,308,566 to 1,308,853 Atu1318 Atu1319: Atu1319 - glutamyl-tRNA amidotransferase subunit A, at 1,308,910 to 1,310,391 Atu1319 Atu1320: Atu1320 - acetyltransferase, at 1,310,412 to 1,310,879 Atu1320 Atu1321: Atu1321 - hypothetical protein, at 1,310,946 to 1,311,203 Atu1321
Group Condition Atu1317 Atu1318 Atu1319 Atu1320 Atu1321
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. -0.1 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. N.D. +0.1 -0.7
nitrogen source DL-2-Aminobutyric (N) -0.6 N.D. N.D. -0.4 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. N.D. +0.1 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 N.D. N.D. +0.2 -0.7
phage AgroPhage_D04 -0.5 N.D. N.D. +0.7 -0.5
in planta Bethi_Library_OD0.05 +0.3 N.D. N.D. +0.3 -0.8
phage AgroPhage_E04 +0.5 N.D. N.D. +0.4 -1.0
stress R2A with tungstate 375 mM -0.1 N.D. N.D. -0.6 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. +0.3 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. -0.6 +0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.4 N.D. N.D. +0.2 -0.6
in planta Bethi_Library_OD0.01 +0.2 N.D. N.D. +0.3 -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. N.D. -0.3 +0.7
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.3 N.D. N.D. +0.4 -0.6
stress Timentin 6.25 ug/mL +0.4 N.D. N.D. +0.3 -0.4
phage AgroPhage_B07 +0.2 N.D. N.D. +0.5 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. N.D. +0.5 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. N.D. -0.1 +0.9
nophagecontrol No phage control -0.2 N.D. N.D. +0.1 +1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. N.D. +0.8 +0.3
stress R2A with Vancomycin 0.009 mM +0.2 N.D. N.D. +0.0 +0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 N.D. N.D. +0.2 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. N.D. +0.1 +1.1
carbon source DL-glyceraldehyde (C) +0.3 N.D. N.D. +0.5 +0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. N.D. +0.8 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 N.D. N.D. +1.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. N.D. +0.2 +1.6
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 N.D. N.D. +0.9 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. +0.9 +0.6
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