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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0035 and Atu0036 are separated by 127 nucleotides
Atu0036 and Atu0037 are separated by 19 nucleotides
Atu0037 and Atu0038 are separated by 29 nucleotides
Atu0038 and Atu0039 are separated by 15 nucleotides
Atu0035: Atu0035 - phosphoenolpyruvate carboxykinase, at 37,589 to 39,199
Atu0035
Atu0036: Atu0036 - hypothetical protein, at 39,327 to 39,761
Atu0036
Atu0037: Atu0037 - pantothenate kinase, at 39,781 to 40,749
Atu0037
Atu0038: Atu0038 - phosphoribosyl-ATP pyrophosphohydrolase, at 40,779 to 41,102
Atu0038
Atu0039: Atu0039 - imidazoleglycerol-phosphate synthase cyclase, at 41,118 to 41,894
Atu0039
Group
Condition
Atu0035
Atu0036
Atu0037
Atu0038
Atu0039
carbon source
succinate (C)
-6.5
+0.0
N.D.
-8.7
-5.7
carbon source
L-Arabinose (C)
-6.4
-0.3
N.D.
-8.5
-5.5
carbon source
Protocatechuic Acid (C)
-7.1
+0.2
N.D.
-8.3
-5.3
carbon source
L-Arabinose (C)
-7.4
-0.3
N.D.
-7.2
-5.5
carbon source
D-Quinic (C)
-7.8
-0.2
N.D.
-6.9
-5.1
carbon source
Protocatechuic Acid (C)
-6.9
-0.2
N.D.
-7.2
-5.4
carbon source
Fumarate (C)
-5.0
-0.1
N.D.
-7.7
-5.7
carbon source
methyl-beta-L-arabinopyranoside (C)
-5.9
+0.0
N.D.
-7.8
-4.8
carbon source
succinate (C)
-6.4
+0.1
N.D.
-6.3
-5.8
carbon source
trans-aconitic (C)
-7.5
+0.3
N.D.
-6.5
-4.6
carbon source
D-Galacturonic Acid (C)
-5.7
-0.2
N.D.
-7.7
-4.7
carbon source
L-Fucose (C)
-5.5
-0.1
N.D.
-7.8
-4.8
carbon source
D-Glucuronic gamma lactone (C)
-6.3
-0.2
N.D.
-6.8
-4.9
carbon source
D-Quinic (C)
-6.4
+0.1
N.D.
-6.9
-5.1
carbon source
acetate (C)
-6.0
-0.3
N.D.
-6.4
-5.5
carbon source
L-Fucose (C)
-7.0
+0.1
N.D.
-6.1
-5.1
nitrogen source
L-Glutamic (N)
-5.2
-0.1
N.D.
-8.2
-4.8
carbon source
Glutaric (C)
-5.3
-0.3
N.D.
-7.8
-4.8
nitrogen source
L-pyroglutamic (N)
-4.9
-0.4
N.D.
-8.0
-4.6
carbon source
D-Glucuronic gamma lactone (C)
-6.0
-0.3
N.D.
-6.7
-4.8
carbon source
4-Aminobutyric (C)
-5.7
-0.3
N.D.
-6.8
-4.8
carbon source
D-glutamine (C)
-7.4
-0.0
N.D.
-5.3
-4.8
nitrogen source
L-Proline (N)
-5.7
-0.5
N.D.
-6.8
-4.6
carbon source
acetate (C)
-5.6
-0.1
N.D.
-5.9
-5.7
carbon source
a-Ketoglutaric (C)
-4.7
-0.1
N.D.
-7.6
-4.6
carbon source
Beta-alanine (C)
-5.8
-0.5
N.D.
-5.9
-4.8
carbon source
trans-aconitic (C)
-5.8
-0.8
N.D.
-5.6
-4.5
carbon source
D-Galacturonic Acid (C)
-5.1
-0.5
N.D.
-6.4
-4.7
carbon source
Ethyl benzoate (C)
-4.9
-0.3
N.D.
-6.8
-4.7
carbon source
sarcosine (C)
-5.5
-0.7
N.D.
-5.6
-4.8
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