Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS17880 and ABZR87_RS17885 are separated by 9 nucleotidesABZR87_RS17885 and ABZR87_RS17890 are separated by 155 nucleotidesABZR87_RS17890 and ABZR87_RS17895 are separated by 259 nucleotidesABZR87_RS17895 and ABZR87_RS17900 overlap by 17 nucleotides ABZR87_RS17880: ABZR87_RS17880 - GNAT family protein, at 368,363 to 369,070 _RS17880 ABZR87_RS17885: ABZR87_RS17885 - membrane protein, at 369,080 to 370,696 _RS17885 ABZR87_RS17890: ABZR87_RS17890 - FlxA-like family protein, at 370,852 to 371,364 _RS17890 ABZR87_RS17895: ABZR87_RS17895 - ABC transporter ATP-binding protein, at 371,624 to 372,445 _RS17895 ABZR87_RS17900: ABZR87_RS17900 - ABC transporter permease, at 372,429 to 373,259 _RS17900
Group Condition ABZR87_RS17880 ABZR87_RS17885 ABZR87_RS17890 ABZR87_RS17895 ABZR87_RS17900
rhizosphere rhizosphere sample 3; outgrowth in LB +0.3 +0.2 -1.3 N.D. -0.4
rhizosphere rhizosphere sample 4; outgrowth in LB -0.2 -0.0 -0.7 N.D. -0.1
carbon source Sebacic (C) +0.2 -0.0 -0.6 N.D. -0.5
phage Ra3_1 -0.1 +0.1 -0.5 N.D. -0.4
phage Ra1_0.1 -0.1 -0.1 -0.6 N.D. +0.0
carbon source Disodium Glutarate (C) -0.2 -0.1 -0.4 N.D. -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.1 +0.1 -0.6 N.D. +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.0 -0.5 N.D. -0.2
soil soil sample 6; outgrowth in LB +0.1 -0.0 -0.7 N.D. -0.0
rhizosphere rhizosphere sample 8; outgrowth in LB -0.2 +0.1 -0.1 N.D. -0.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 +0.1 -0.4 N.D. -0.1
soil soil EcoFAB sample 1; outgrowth in LB +0.0 +0.2 -0.4 N.D. -0.4
rhizosphere rhizosphere sample 5; outgrowth in LB -0.1 +0.1 -0.3 N.D. -0.2
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 +0.1 -0.4 N.D. +0.0
carbon source Octanoic (C) +0.3 +0.1 -0.6 N.D. -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 -0.4 N.D. -0.1
soil soil sample 4; outgrowth in LB -0.3 +0.1 -0.1 N.D. -0.1
carbon source Hexanoic (C) -0.1 -0.1 -0.4 N.D. +0.2
soil soil EcoFAB sample 2; outgrowth in LB +0.0 +0.2 -0.5 N.D. +0.0
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.5 -0.1 +0.2 N.D. +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.3 +0.0 +0.3 N.D. -0.2
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.4 +0.0 +0.3 N.D. -0.0
root root sample 5; outgrowth in LB +0.2 +0.1 -0.5 N.D. +0.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.3 -0.4 N.D. -0.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 +0.1 +0.3 N.D. +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.2 +0.1 N.D. +0.3
root root sample 6; outgrowth in LB -0.2 +0.3 +0.6 N.D. -0.0
nitrogen source nitrogen source nitrate 5mM +0.0 +0.3 +0.5 N.D. -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.0 +0.7 N.D. +0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.3 +1.0 N.D. -0.2
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