Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS05575 and ABZR87_RS05580 are separated by 89 nucleotidesABZR87_RS05580 and ABZR87_RS05585 are separated by 46 nucleotidesABZR87_RS05585 and ABZR87_RS05590 are separated by 600 nucleotidesABZR87_RS05590 and ABZR87_RS05595 are separated by 32 nucleotides ABZR87_RS05575: ABZR87_RS05575 - lipid A biosynthesis lauroyl acyltransferase, at 1,185,175 to 1,186,068 _RS05575 ABZR87_RS05580: ABZR87_RS05580 - diaminopimelate epimerase, at 1,186,158 to 1,187,039 _RS05580 ABZR87_RS05585: ABZR87_RS05585 - polyphosphate kinase 2 family protein, at 1,187,086 to 1,187,913 _RS05585 ABZR87_RS05590: ABZR87_RS05590 - orotate phosphoribosyltransferase, at 1,188,514 to 1,189,191 _RS05590 ABZR87_RS05595: ABZR87_RS05595 - exodeoxyribonuclease III, at 1,189,224 to 1,190,009 _RS05595
Group Condition ABZR87_RS05575 ABZR87_RS05580 ABZR87_RS05585 ABZR87_RS05590 ABZR87_RS05595
carbon source 4-Hydroxybenzoic Acid (C) N.D. -4.1 +0.0 -4.9 +0.3
carbon source 3-Hydroxypropionate (C) N.D. -1.4 -0.0 -4.9 -0.1
carbon source propionate (C) N.D. -1.3 -0.0 -4.9 -0.1
carbon source 1,2-Propanediol (C) N.D. -1.1 -0.0 -5.0 +0.0
carbon source Protocatechuic Acid (C) N.D. -0.9 -0.0 -4.9 -0.3
carbon source propionate (C) N.D. -1.0 -0.0 -4.9 -0.1
carbon source D-Glucose (C) N.D. -0.9 -0.0 -4.9 -0.0
carbon source Protocatechuic Acid (C) N.D. -1.2 -0.1 -4.3 -0.2
carbon source Octanoic (C) N.D. -2.1 -0.2 -2.8 -0.4
carbon source Beta-alanine (C) N.D. -2.3 -0.0 -3.2 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -2.6 -0.0 -2.4 -0.3
carbon source D-Galactose (C) N.D. -0.5 -0.0 -4.5 -0.2
carbon source succinate (C) N.D. -1.3 -0.0 -3.8 -0.1
carbon source Trans-2-methyl-2-butenoic (C) N.D. -0.5 -0.0 -4.5 -0.1
carbon source Protocatechuic Acid (C) N.D. -0.9 +0.0 -4.1 -0.1
carbon source Lauric (C) N.D. -1.5 +0.0 -3.7 +0.0
carbon source Beta-alanine (C) N.D. -0.4 -0.0 -4.6 -0.1
carbon source Pimelic (C) N.D. -0.1 -0.0 -4.8 +0.0
carbon source Glycerol (C) N.D. -0.3 -0.1 -4.4 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -1.5 -0.1 -2.8 -0.4
carbon source Pimelic (C) N.D. +0.2 +0.0 -4.8 -0.0
carbon source propionate (C) N.D. -0.9 +0.0 -3.6 -0.0
carbon source D-Galactose (C) N.D. -0.7 -0.1 -3.6 -0.1
carbon source Heptanoic (C) N.D. -0.6 -0.2 -3.6 -0.1
carbon source Lauric (C) N.D. -0.8 +0.1 -3.6 -0.1
carbon source Suberic (C) N.D. -0.6 +0.0 -3.6 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -1.6 -0.0 -2.8 +0.0
carbon source Pimelic (C) N.D. -0.5 +0.1 -3.7 -0.2
carbon source Glycerol (C) N.D. +0.4 +0.1 -4.2 -0.1
root root sample 6; outgrowth in LB N.D. -4.2 -0.1 +0.9 -0.0
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