Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS05190 and ABZR87_RS05195 are separated by 4 nucleotidesABZR87_RS05195 and ABZR87_RS05200 are separated by 278 nucleotidesABZR87_RS05200 and ABZR87_RS05205 overlap by 4 nucleotidesABZR87_RS05205 and ABZR87_RS05210 are separated by 102 nucleotides ABZR87_RS05190: ABZR87_RS05190 - 4-aminobutyrate--2-oxoglutarate transaminase, at 1,089,854 to 1,091,134 _RS05190 ABZR87_RS05195: ABZR87_RS05195 - NAD-dependent succinate-semialdehyde dehydrogenase, at 1,091,139 to 1,092,641 _RS05195 ABZR87_RS05200: ABZR87_RS05200 - homoserine O-acetyltransferase, at 1,092,920 to 1,094,134 _RS05200 ABZR87_RS05205: ABZR87_RS05205 - methionine biosynthesis protein MetW, at 1,094,131 to 1,094,766 _RS05205 ABZR87_RS05210: ABZR87_RS05210 - tetratricopeptide repeat protein, at 1,094,869 to 1,095,615 _RS05210
Group Condition ABZR87_RS05190 ABZR87_RS05195 ABZR87_RS05200 ABZR87_RS05205 ABZR87_RS05210
carbon source D-Galactose (C) +0.1 -0.2 -6.2 -1.2 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.0 -0.3 -5.7 -0.9 -0.2
carbon source D-Galactose (C) -0.0 -0.1 -6.0 -0.8 -0.1
carbon source Octanoic (C) +0.1 -0.3 -4.7 -2.2 +0.1
carbon source Carbon source D-Glucose 10 mM -0.1 +0.1 -5.5 -1.3 -0.0
carbon source Trans-2-methyl-2-butenoic (C) -0.0 -0.1 -5.9 -0.7 -0.1
carbon source Protocatechuic Acid (C) -0.0 -0.1 -6.0 -0.7 -0.0
carbon source Pimelic (C) +0.1 -0.0 -6.1 -0.7 -0.0
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.2 +0.1 -4.9 -2.1 -0.0
carbon source Protocatechuic Acid (C) +0.1 -0.1 -6.0 -0.6 -0.1
nitrogen source nitrogen source nitrate 20mM -0.0 +0.1 -5.7 -0.8 -0.2
carbon source Trans-2-methyl-2-butenoic (C) -0.2 -0.0 -5.7 -0.6 -0.1
carbon source Lauric (C) +0.1 +0.1 -6.0 -0.8 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.0 +0.1 -5.8 -0.6 -0.3
carbon source Heptanoic (C) +0.2 +0.2 -5.5 -1.4 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 -0.0 -6.0 -0.5 -0.1
carbon source Azelaic (C) +0.0 +0.3 -4.9 -2.0 +0.1
carbon source Sebacic (C) -0.1 +0.2 -5.1 -1.0 -0.5
carbon source Heptanoic (C) +0.0 +0.3 -5.5 -1.3 +0.2
carbon source Dodecandioic (C) -0.1 +0.3 -5.4 -1.3 +0.2
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.1 +0.1 -5.6 -1.2 +0.3
carbon source D-Glucose (C) -0.0 +0.1 -5.6 -0.7 -0.1
carbon source Sebacic (C) +0.0 +0.2 -5.3 -1.1 -0.0
carbon source D-Glucose (C) +0.1 +0.0 -5.1 -1.3 +0.1
root root sample 5; outgrowth in LB -0.2 +0.2 -3.1 -3.2 +0.1
nitrogen source nitrogen source nitrate 20mM +0.2 +0.1 -5.3 -1.0 -0.1
carbon source D-Glucose (C) +0.2 +0.2 -5.3 -0.9 -0.2
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +3.2 +0.0 -5.4 -2.5 +0.0
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +2.1 +0.2 -5.2 -1.4 -0.1
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +2.1 -0.2 -4.7 -1.7 +0.2
remove
ABZR87_RS05190
plot		 remove
ABZR87_RS05195
plot		 remove
ABZR87_RS05200		 remove
ABZR87_RS05205
plot		 remove
ABZR87_RS05210
plot