Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b3114	b3115	b3116	b3117	b3118
		tdcE	tdcD	tdcC	tdcB	tdcA
motility	outer cut, LB soft agar motility assay	-0.2	-0.9	-0.7	-0.4	-0.5
stress	LB + carbenicillin regrowth after 48hr	-0.3	-0.8	-0.6	-0.6	-0.3
stress	LB + carbenicillin regrowth after 48hr	-0.2	-0.6	-0.7	-0.6	-0.3
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.3	-0.1	-0.2	-0.9	-0.9
motility	outer cut, LB soft agar motility assay	-0.3	-0.5	-0.3	-0.5	-0.7
stress	Cephalothin 0.01 mg/ml	-0.1	+0.0	-1.9	-0.1	-0.2
mixed community	Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan	-0.2	-0.4	-0.3	-0.4	-0.4
stress	LB + ciprofloxacin regrowth after 48hrs	-0.1	-0.6	-0.5	-0.3	-0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.3	-0.2	+0.0	-0.5	-0.7
mzaabcde	mzaABCDE	-0.3	+0.0	-0.1	-0.7	-0.5
stress	LB + carbenicillin Time9hr	-0.2	-0.6	-0.3	-0.3	-0.1
plasmid transformation	vcDART vector transformation; agar assay	-0.2	-0.1	-0.2	-0.7	-0.4
motility	outer cut, LB soft agar motility assay	-0.2	-0.1	-0.5	-0.3	-0.5
gfp_control	GFP_control	-0.2	-0.0	-0.1	-0.8	-0.3
lb	LB regrowth after 48hrs	-0.1	-0.6	-0.4	-0.2	-0.1
plasmid transformation	vcDART vector transformation; agar assay	-0.1	-0.1	-0.1	-0.7	-0.4
stress	LB Anaerobic with Zinc Pyrithione 0.0000025 mM	-0.1	-0.2	-0.3	-0.1	-0.6
stress	LB + carbenicillin Time8hr	-0.2	-0.5	-0.2	-0.4	-0.2
stress	LB + carbenicillin Time9hr	-0.1	-0.5	-0.2	-0.3	-0.2
retron_ec_48_control	retron_Ec_48_control	-0.1	+0.1	-0.1	-0.8	-0.3
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	-0.2	-0.4	-0.1	+0.1	-0.6
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+0.2	-0.0	-0.1	-0.6	-0.6
stress	LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM	-0.2	-0.0	+0.3	-0.5	-0.7
stress	LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM	-0.2	-0.1	+0.3	-0.4	-0.5
stress	Benzalkonium Chloride 0.004 mg/ml	+0.1	-0.0	-1.7	+0.7	+0.5
stress	LB Anaerobic with Cephalothin 0.0000078125 mM	-0.3	-0.2	-0.0	+0.4	+0.5
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	+0.4	+0.8	+0.2	-0.2	+0.1
phage	T7_phage 0.0015625 MOI TC1	+0.2	+0.5	+0.3	+0.2	+0.7
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	+0.4	+0.9	+0.4	-0.0	+0.4
stress	Chlorite 1.25 mM	+1.0	+0.4	+0.4	+0.5	+0.3