Experiment set9S338 for Enterobacter sp. TBS_079

Compare to:

L-Histidine carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_00831 -7.0 -4.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_03771 -6.3 -12.8 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00693 -6.3 -10.5 Phosphoserine phosphatase compare
MPMX20_01566 -6.2 -13.9 Phosphoserine aminotransferase compare
MPMX20_01367 -6.1 -5.9 Tol-Pal system protein TolR compare
MPMX20_04077 -6.0 -9.2 Argininosuccinate synthase compare
MPMX20_01098 -6.0 -5.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04442 -5.9 -5.8 Sec-independent protein translocase protein TatC compare
MPMX20_03986 -5.9 -4.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00544 -5.9 -7.0 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_01397 -5.9 -10.6 Formimidoylglutamase compare
MPMX20_01368 -5.8 -6.9 hypothetical protein compare
MPMX20_00225 -5.7 -11.6 Phosphoribosylamine--glycine ligase compare
MPMX20_03426 -5.7 -15.6 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01366 -5.7 -6.8 Tol-Pal system protein TolQ compare
MPMX20_02494 -5.7 -5.5 Orotidine 5'-phosphate decarboxylase compare
MPMX20_03354 -5.7 -12.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03264 -5.5 -6.5 Chorismate synthase compare
MPMX20_00226 -5.4 -10.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00927 -5.4 -17.0 Glutamate 5-kinase compare
MPMX20_03338 -5.4 -7.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01741 -5.3 -3.7 Dihydroorotase compare
MPMX20_04496 -5.3 -7.3 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01030 -5.3 -7.3 Lon protease compare
MPMX20_01369 -5.2 -11.7 Tol-Pal system protein TolB compare
MPMX20_04520 -5.2 -12.2 Argininosuccinate lyase compare
MPMX20_00712 -5.2 -13.1 Threonine synthase compare
MPMX20_04140 -5.2 -9.3 Malate dehydrogenase compare
MPMX20_03247 -5.1 -10.4 Amidophosphoribosyltransferase compare
MPMX20_01399 -5.1 -14.9 Urocanate hydratase conserved
MPMX20_01355 -5.0 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00556 -5.0 -12.6 Ornithine carbamoyltransferase subunit F compare
MPMX20_01596 -5.0 -20.4 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00739 -5.0 -4.8 Carbamoyl-phosphate synthase small chain compare
MPMX20_01370 -4.9 -5.4 Peptidoglycan-associated lipoprotein compare
MPMX20_03019 -4.9 -14.2 hypothetical protein compare
MPMX20_00740 -4.9 -11.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_03018 -4.9 -4.8 hypothetical protein compare
MPMX20_00514 -4.9 -5.8 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01354 -4.8 -4.7 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00711 -4.8 -15.3 Homoserine kinase compare
MPMX20_00093 -4.8 -8.0 Orotate phosphoribosyltransferase compare
MPMX20_00928 -4.7 -14.9 Gamma-glutamyl phosphate reductase compare
MPMX20_01396 -4.7 -12.9 Imidazolonepropionase conserved
MPMX20_04278 -4.7 -3.2 3-dehydroquinate synthase compare
MPMX20_01570 -4.7 -4.4 Integration host factor subunit beta compare
MPMX20_04279 -4.7 -4.5 Shikimate kinase 1 compare
MPMX20_04521 -4.7 -9.9 Acetylglutamate kinase compare
MPMX20_01352 -4.6 -11.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03490 -4.6 -8.3 SsrA-binding protein compare
MPMX20_01549 -4.6 -3.2 ATP-binding/permease protein CydD compare
MPMX20_00453 -4.6 -3.1 RNA-binding protein Hfq compare
MPMX20_04110 -4.5 -6.9 Nitrogen regulatory protein compare
MPMX20_02591 -4.5 -8.1 DNA-binding protein H-NS compare
MPMX20_00773 -4.5 -14.5 Catabolite repressor/activator compare
MPMX20_01567 -4.5 -8.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03681 -4.5 -17.1 Amino-acid acetyltransferase compare
MPMX20_01950 -4.5 -4.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01097 -4.5 -9.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04443 -4.5 -4.7 Sec-independent protein translocase protein TatB compare
MPMX20_04650 -4.4 -3.1 tRNA modification GTPase MnmE compare
MPMX20_00419 -4.4 -13.9 Aspartate ammonia-lyase compare
MPMX20_01548 -4.4 -6.0 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01349 -4.4 -7.9 Citrate synthase compare
MPMX20_04499 -4.3 -17.5 Dihydroxy-acid dehydratase compare
MPMX20_03509 -4.3 -2.0 hypothetical protein compare
MPMX20_02593 -4.3 -22.0 Regulator of RpoS compare
MPMX20_00109 -4.3 -25.3 hypothetical protein compare
MPMX20_01351 -4.3 -5.1 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04523 -4.3 -11.7 Acetylornithine deacetylase compare
MPMX20_01029 -4.2 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01357 -4.2 -7.9 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01607 -4.2 -6.9 Outer membrane protein A compare
MPMX20_01551 -4.1 -8.8 Leucine-responsive regulatory protein compare
MPMX20_01362 -4.1 -6.8 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04189 -4.1 -8.3 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00102 -4.1 -2.8 hypothetical protein compare
MPMX20_04522 -4.1 -11.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01028 -4.0 -2.8 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04483 -4.0 -2.8 Lipid III flippase compare
MPMX20_03090 -4.0 -1.9 Methionine--tRNA ligase compare
MPMX20_03022 -4.0 -2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00110 -4.0 -21.8 hypothetical protein compare
MPMX20_04119 -3.9 -2.7 DNA polymerase III subunit chi compare
MPMX20_01286 -3.9 -2.9 Sec-independent protein translocase protein TatE compare
MPMX20_01901 -3.9 -3.3 Integration host factor subunit alpha compare
MPMX20_00976 -3.9 -5.3 Pyrroline-5-carboxylate reductase compare
MPMX20_03021 -3.9 -8.3 hypothetical protein compare
MPMX20_00105 -3.9 -17.0 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01356 -3.8 -10.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00710 -3.8 -17.5 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04444 -3.8 -2.5 Sec-independent protein translocase protein TatA compare
MPMX20_01353 -3.8 -6.5 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04642 -3.8 -2.6 Phosphate import ATP-binding protein PstB compare
MPMX20_04197 -3.7 -5.6 Trk system potassium uptake protein TrkA compare
MPMX20_02768 -3.7 -4.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04469 -3.7 -5.6 Adenylate cyclase compare
MPMX20_04595 -3.7 -2.5 Glutamine synthetase compare
MPMX20_02701 -3.6 -3.5 Fatty acid metabolism regulator protein compare
MPMX20_03013 -3.6 -12.6 dTDP-glucose 4,6-dehydratase compare
MPMX20_00241 -3.6 -13.3 Glucose-6-phosphate isomerase compare
MPMX20_04275 -3.6 -3.5 Ribulose-phosphate 3-epimerase compare
MPMX20_03010 -3.6 -5.4 UDP-glucose 4-epimerase compare
MPMX20_02475 -3.6 -5.9 Putrescine export system permease protein SapB compare
MPMX20_03267 -3.5 -5.5 Phosphohistidine phosphatase SixA compare
MPMX20_04497 -3.5 -9.1 HTH-type transcriptional regulator GltC compare
MPMX20_03683 -3.5 -2.4 RecBCD enzyme subunit RecB compare
MPMX20_04162 -3.5 -7.3 3-dehydroquinate dehydratase compare
MPMX20_01334 -3.4 -10.8 Phosphoglucomutase compare
MPMX20_03308 -3.4 -8.7 Cysteine synthase A compare
MPMX20_02696 -3.4 -9.6 Murein tetrapeptide carboxypeptidase compare
MPMX20_00106 -3.4 -8.1 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04489 -3.3 -18.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00745 -3.3 -7.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02574 -3.3 -5.3 putative intracellular septation protein A compare
MPMX20_01400 -3.2 -9.2 Histidine ammonia-lyase conserved
MPMX20_04626 -3.2 -5.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01350 -3.2 -4.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04601 -3.2 -3.8 DNA polymerase I compare
MPMX20_03685 -3.2 -4.9 RecBCD enzyme subunit RecC compare
MPMX20_03466 -3.2 -10.8 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_04531 -3.2 -11.3 Cystathionine gamma-synthase compare
MPMX20_01361 -3.2 -10.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03382 -3.1 -3.0 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00452 -3.1 -10.0 tRNA dimethylallyltransferase compare
MPMX20_02766 -3.1 -5.7 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02478 -3.0 -9.5 Putrescine export system ATP-binding protein SapF compare
MPMX20_03012 -3.0 -14.4 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03407 -3.0 -5.0 Chaperone protein HscA compare
MPMX20_03468 -3.0 -8.9 T-protein compare
MPMX20_04768 -2.9 -7.3 hypothetical protein compare
MPMX20_01942 -2.8 -10.9 HTH-type transcriptional repressor BluR compare
MPMX20_00108 -2.8 -17.3 hypothetical protein compare
MPMX20_00747 -2.8 -6.9 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_00998 -2.8 -5.1 Sec translocon accessory complex subunit YajC compare
MPMX20_02767 -2.8 -5.2 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02635 -2.8 -3.7 Release factor glutamine methyltransferase compare
MPMX20_01984 -2.7 -3.5 Ribonuclease T compare
MPMX20_02477 -2.7 -5.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_01552 -2.7 -5.3 hypothetical protein compare
MPMX20_04530 -2.7 -8.6 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03643 -2.6 -10.3 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_01156 -2.6 -4.0 hypothetical protein compare
MPMX20_04498 -2.6 -9.9 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03390 -2.6 -8.2 Outer membrane protein assembly factor BamB compare
MPMX20_00768 -2.6 -11.8 3-isopropylmalate dehydrogenase compare
MPMX20_00230 -2.6 -10.4 Homoserine O-succinyltransferase compare
MPMX20_03642 -2.6 -12.1 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_03017 -2.6 -12.7 hypothetical protein compare
MPMX20_04668 -2.5 -3.0 hypothetical protein compare
MPMX20_03641 -2.5 -8.7 Phosphoadenosine phosphosulfate reductase compare
MPMX20_03409 -2.5 -3.2 Iron-binding protein IscA compare
MPMX20_02770 -2.5 -5.8 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_02826 -2.4 -3.3 Cold shock-like protein CspB compare
MPMX20_02476 -2.4 -3.5 Putrescine export system permease protein SapC compare
MPMX20_02344 -2.4 -2.5 hypothetical protein compare
MPMX20_00767 -2.4 -8.7 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03207 -2.4 -8.6 NADH-quinone oxidoreductase subunit M compare
MPMX20_04641 -2.3 -3.8 Phosphate transport system permease protein PstA compare
MPMX20_03852 -2.3 -10.7 Cystathionine beta-lyase MetC compare
MPMX20_03154 -2.3 -9.5 Inner membrane protein YejM compare
MPMX20_03210 -2.2 -5.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_03206 -2.2 -8.7 NADH-quinone oxidoreductase subunit N compare
MPMX20_01972 -2.2 -1.4 tRNA-Val compare
MPMX20_02513 -2.1 -9.9 Tryptophan synthase beta chain compare
MPMX20_03580 -2.1 -7.0 Protein RecA compare
MPMX20_00722 -2.1 -7.5 Na(+)/H(+) antiporter NhaA compare
MPMX20_00980 -2.1 -9.2 hypothetical protein compare
MPMX20_04385 -2.1 -8.0 hypothetical protein compare
MPMX20_00769 -2.1 -9.5 2-isopropylmalate synthase compare
MPMX20_03153 -2.1 -2.7 hypothetical protein compare
MPMX20_02512 -2.1 -9.6 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03215 -2.0 -3.1 NADH-quinone oxidoreductase subunit E compare
MPMX20_04440 -2.0 -2.0 Transcription antitermination protein RfaH compare
MPMX20_03209 -2.0 -3.5 NADH-quinone oxidoreductase subunit K compare
MPMX20_04465 -2.0 -5.5 Tyrosine recombinase XerC compare
MPMX20_04482 -1.9 -9.3 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_03882 -1.9 -7.9 Outer membrane protein TolC compare
MPMX20_01022 -1.9 -9.3 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03443 -1.9 -4.5 Anti-sigma-E factor RseA compare
MPMX20_00766 -1.9 -4.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03208 -1.9 -7.0 NADH-quinone oxidoreductase subunit L compare
MPMX20_04491 -1.8 -4.4 Thioredoxin 1 compare
MPMX20_04598 -1.8 -6.3 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_02511 -1.8 -8.9 Bifunctional protein TrpGD compare
MPMX20_02510 -1.8 -9.9 Anthranilate synthase component 1 compare
MPMX20_00807 -1.8 -4.2 Pyruvate dehydrogenase E1 component compare
MPMX20_03015 -1.8 -13.4 Phosphoglucosamine mutase compare
MPMX20_01722 -1.8 -1.9 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04276 -1.7 -4.9 DNA adenine methylase compare
MPMX20_03226 -1.7 -4.6 Acetate kinase compare
MPMX20_03020 -1.7 -5.5 hypothetical protein compare
MPMX20_02514 -1.7 -4.9 Tryptophan synthase alpha chain compare
MPMX20_02204 -1.7 -5.1 hypothetical protein compare
MPMX20_03753 -1.7 -4.4 Tyrosine recombinase XerD compare
MPMX20_00480 -1.7 -2.3 50S ribosomal protein L9 compare
MPMX20_03629 -1.7 -4.2 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03386 -1.7 -1.1 putative protein YfgJ compare
MPMX20_03214 -1.7 -6.5 NADH-quinone oxidoreductase subunit F compare
MPMX20_04433 -1.7 -10.3 Trk system potassium uptake protein TrkH compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source L-Histidine in Enterobacter sp. TBS_079

For carbon source L-Histidine across organisms