Experiment set9S334 for Enterobacter sp. TBS_079

Compare to:

L-Malic acid disodium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01370 -7.1 -4.6 Peptidoglycan-associated lipoprotein compare
MPMX20_01566 -6.8 -9.3 Phosphoserine aminotransferase compare
MPMX20_00831 -6.4 -4.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_00693 -5.9 -9.1 Phosphoserine phosphatase compare
MPMX20_03771 -5.9 -10.7 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03007 -5.8 -5.6 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03338 -5.8 -4.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03681 -5.8 -12.3 Amino-acid acetyltransferase compare
MPMX20_04077 -5.6 -8.5 Argininosuccinate synthase compare
MPMX20_03468 -5.5 -5.4 T-protein compare
MPMX20_00928 -5.4 -10.4 Gamma-glutamyl phosphate reductase compare
MPMX20_04499 -5.3 -12.9 Dihydroxy-acid dehydratase compare
MPMX20_04520 -5.3 -8.1 Argininosuccinate lyase compare
MPMX20_03354 -5.3 -11.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03006 -5.3 -8.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00712 -5.2 -10.0 Threonine synthase compare
MPMX20_01369 -5.2 -10.0 Tol-Pal system protein TolB compare
MPMX20_03426 -5.2 -15.1 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00544 -5.2 -7.1 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_01367 -5.2 -6.1 Tol-Pal system protein TolR compare
MPMX20_01570 -5.1 -2.6 Integration host factor subunit beta compare
MPMX20_00225 -5.1 -11.3 Phosphoribosylamine--glycine ligase compare
MPMX20_01368 -5.0 -5.2 hypothetical protein compare
MPMX20_04521 -5.0 -6.8 Acetylglutamate kinase compare
MPMX20_03004 -4.9 -10.5 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00226 -4.9 -10.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00927 -4.9 -15.6 Glutamate 5-kinase compare
MPMX20_04522 -4.9 -8.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01355 -4.9 -1.1 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02494 -4.8 -5.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04531 -4.7 -11.4 Cystathionine gamma-synthase compare
MPMX20_00093 -4.7 -3.3 Orotate phosphoribosyltransferase compare
MPMX20_04162 -4.7 -3.2 3-dehydroquinate dehydratase compare
MPMX20_03264 -4.7 -6.3 Chorismate synthase compare
MPMX20_01741 -4.7 -4.6 Dihydroorotase compare
MPMX20_01596 -4.7 -16.1 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01972 -4.7 -1.1 tRNA-Val compare
MPMX20_00773 -4.7 -14.0 Catabolite repressor/activator compare
MPMX20_03019 -4.6 -9.4 hypothetical protein compare
MPMX20_04442 -4.6 -7.1 Sec-independent protein translocase protein TatC compare
MPMX20_03247 -4.6 -9.3 Amidophosphoribosyltransferase compare
MPMX20_01548 -4.6 -3.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01567 -4.6 -5.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04523 -4.6 -9.8 Acetylornithine deacetylase compare
MPMX20_03018 -4.6 -3.2 hypothetical protein compare
MPMX20_03002 -4.6 -13.7 Histidinol dehydrogenase compare
MPMX20_01098 -4.5 -5.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00711 -4.5 -14.3 Homoserine kinase compare
MPMX20_00740 -4.5 -10.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_00556 -4.5 -11.2 Ornithine carbamoyltransferase subunit F compare
MPMX20_00514 -4.5 -3.1 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00739 -4.4 -4.3 Carbamoyl-phosphate synthase small chain compare
MPMX20_00976 -4.4 -3.1 Pyrroline-5-carboxylate reductase compare
MPMX20_01349 -4.4 -6.0 Citrate synthase compare
MPMX20_00230 -4.4 -9.3 Homoserine O-succinyltransferase compare
MPMX20_04443 -4.4 -3.3 Sec-independent protein translocase protein TatB compare
MPMX20_03986 -4.4 -4.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04444 -4.3 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_01097 -4.3 -8.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00710 -4.3 -16.9 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04496 -4.3 -8.6 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01030 -4.3 -9.1 Lon protease compare
MPMX20_03003 -4.2 -12.1 Histidinol-phosphate aminotransferase compare
MPMX20_04278 -4.2 -2.9 3-dehydroquinate synthase compare
MPMX20_03005 -4.2 -8.5 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04427 -4.1 -1.0 5S ribosomal RNA compare
MPMX20_01366 -4.1 -5.5 Tol-Pal system protein TolQ compare
MPMX20_01901 -4.1 -2.1 Integration host factor subunit alpha compare
MPMX20_01950 -4.0 -3.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01549 -4.0 -2.8 ATP-binding/permease protein CydD compare
MPMX20_00453 -4.0 -2.1 RNA-binding protein Hfq compare
MPMX20_01362 -4.0 -5.4 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01334 -3.9 -10.4 Phosphoglucomutase compare
MPMX20_04189 -3.9 -6.0 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_02574 -3.9 -2.7 putative intracellular septation protein A compare
MPMX20_03001 -3.9 -13.9 ATP phosphoribosyltransferase compare
MPMX20_04498 -3.9 -10.9 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_01361 -3.8 -9.1 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01607 -3.7 -6.0 Outer membrane protein A compare
MPMX20_04768 -3.7 -8.2 hypothetical protein compare
MPMX20_00998 -3.7 -4.0 Sec translocon accessory complex subunit YajC compare
MPMX20_00241 -3.7 -11.9 Glucose-6-phosphate isomerase compare
MPMX20_00825 -3.7 -1.5 Aspartate 1-decarboxylase compare
MPMX20_02593 -3.6 -19.8 Regulator of RpoS compare
MPMX20_00768 -3.6 -14.3 3-isopropylmalate dehydrogenase compare
MPMX20_00109 -3.6 -21.2 hypothetical protein compare
MPMX20_03008 -3.6 -8.3 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_04497 -3.6 -10.4 HTH-type transcriptional regulator GltC compare
MPMX20_04440 -3.5 -1.6 Transcription antitermination protein RfaH compare
MPMX20_00766 -3.5 -8.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_00767 -3.5 -12.2 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_00102 -3.5 -2.4 hypothetical protein compare
MPMX20_04469 -3.5 -4.8 Adenylate cyclase compare
MPMX20_04650 -3.5 -3.4 tRNA modification GTPase MnmE compare
MPMX20_03021 -3.5 -6.6 hypothetical protein compare
MPMX20_00106 -3.5 -3.4 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03022 -3.4 -2.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03013 -3.4 -10.5 dTDP-glucose 4,6-dehydratase compare
MPMX20_01028 -3.4 -2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02591 -3.3 -7.1 DNA-binding protein H-NS compare
MPMX20_01029 -3.3 -3.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03010 -3.3 -4.0 UDP-glucose 4-epimerase compare
MPMX20_02514 -3.3 -4.8 Tryptophan synthase alpha chain compare
MPMX20_00110 -3.3 -14.8 hypothetical protein compare
MPMX20_02513 -3.3 -12.1 Tryptophan synthase beta chain compare
MPMX20_03852 -3.3 -13.2 Cystathionine beta-lyase MetC compare
MPMX20_00105 -3.2 -11.6 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03310 -3.2 -5.3 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04483 -3.2 -3.1 Lipid III flippase compare
MPMX20_02512 -3.1 -12.6 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04595 -3.1 -1.9 Glutamine synthetase compare
MPMX20_03012 -3.1 -12.4 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03466 -3.0 -8.2 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02511 -3.0 -12.9 Bifunctional protein TrpGD compare
MPMX20_03309 -3.0 -3.3 Phosphocarrier protein HPr compare
MPMX20_03382 -3.0 -2.0 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04276 -3.0 -6.9 DNA adenine methylase compare
MPMX20_03685 -2.9 -2.0 RecBCD enzyme subunit RecC compare
MPMX20_01354 -2.9 -3.4 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03090 -2.9 -1.3 Methionine--tRNA ligase compare
MPMX20_04140 -2.9 -10.1 Malate dehydrogenase compare
MPMX20_04133 -2.9 -5.9 Stringent starvation protein A compare
MPMX20_04626 -2.8 -4.6 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04489 -2.7 -13.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02510 -2.7 -14.3 Anthranilate synthase component 1 compare
MPMX20_03407 -2.7 -4.0 Chaperone protein HscA compare
MPMX20_02476 -2.6 -2.8 Putrescine export system permease protein SapC compare
MPMX20_04275 -2.6 -3.0 Ribulose-phosphate 3-epimerase compare
MPMX20_02766 -2.6 -4.4 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03683 -2.6 -3.0 RecBCD enzyme subunit RecB compare
MPMX20_04642 -2.5 -2.4 Phosphate import ATP-binding protein PstB compare
MPMX20_02672 -2.4 -18.5 hypothetical protein compare
MPMX20_03490 -2.4 -6.6 SsrA-binding protein compare
MPMX20_02701 -2.4 -2.7 Fatty acid metabolism regulator protein compare
MPMX20_03132 -2.4 -8.1 Tagatose-6-phosphate kinase compare
MPMX20_02475 -2.4 -5.8 Putrescine export system permease protein SapB compare
MPMX20_01734 -2.4 -9.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_00807 -2.3 -2.7 Pyruvate dehydrogenase E1 component compare
MPMX20_04197 -2.3 -6.5 Trk system potassium uptake protein TrkA compare
MPMX20_03742 -2.3 -6.1 HTH-type transcriptional regulator GalR compare
MPMX20_00812 -2.3 -7.1 Aconitate hydratase B compare
MPMX20_01552 -2.2 -4.2 hypothetical protein compare
MPMX20_03390 -2.2 -7.4 Outer membrane protein assembly factor BamB compare
MPMX20_04119 -2.2 -2.3 DNA polymerase III subunit chi compare
MPMX20_03469 -2.2 -8.7 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_03479 -2.2 -2.3 30S ribosomal protein S16 compare
MPMX20_03226 -2.2 -3.8 Acetate kinase compare
MPMX20_00769 -2.2 -8.3 2-isopropylmalate synthase compare
MPMX20_02768 -2.2 -2.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04530 -2.2 -7.9 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02767 -2.1 -3.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00899 -2.1 -1.5 Ribonuclease HI compare
MPMX20_02825 -2.1 -3.5 Cold shock-like protein CspB compare
MPMX20_03767 -2.1 -5.6 Xaa-Pro aminopeptidase compare
MPMX20_04038 -2.1 -4.7 Glucitol operon repressor compare
MPMX20_04641 -2.1 -3.1 Phosphate transport system permease protein PstA compare
MPMX20_00764 -2.1 -1.1 hypothetical protein compare
MPMX20_01156 -2.1 -4.1 hypothetical protein compare
MPMX20_03210 -2.0 -4.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_02770 -2.0 -4.7 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_00721 -2.0 -2.7 Chaperone protein DnaJ compare
MPMX20_02478 -2.0 -6.7 Putrescine export system ATP-binding protein SapF compare
MPMX20_04110 -2.0 -4.2 Nitrogen regulatory protein compare
MPMX20_02477 -2.0 -3.9 Peptide transport system ATP-binding protein SapD compare
MPMX20_03227 -2.0 -5.7 Phosphate acetyltransferase compare
MPMX20_04413 -1.9 -10.1 Aerobic C4-dicarboxylate transport protein conserved
MPMX20_01363 -1.9 -6.3 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_03217 -1.9 -3.8 NADH-quinone oxidoreductase subunit B compare
MPMX20_01352 -1.9 -6.9 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04532 -1.9 -2.1 Met repressor compare
MPMX20_00197 -1.9 -1.2 tRNA-Tyr compare
MPMX20_03591 -1.9 -4.8 Glucitol operon repressor compare
MPMX20_03409 -1.9 -2.4 Iron-binding protein IscA compare
MPMX20_04601 -1.9 -2.5 DNA polymerase I compare
MPMX20_00747 -1.8 -4.2 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_00537 -1.8 -9.3 Trehalose-6-phosphate hydrolase compare
MPMX20_03020 -1.8 -4.1 hypothetical protein compare
MPMX20_01984 -1.8 -2.0 Ribonuclease T compare
MPMX20_02549 -1.8 -3.3 hypothetical protein compare
MPMX20_02305 -1.8 -2.5 hypothetical protein compare
MPMX20_04385 -1.8 -6.0 hypothetical protein compare
MPMX20_03207 -1.8 -4.5 NADH-quinone oxidoreductase subunit M compare
MPMX20_03290 -1.8 -1.4 tRNA-Ala compare
MPMX20_03218 -1.8 -3.1 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04484 -1.7 -5.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03864 -1.7 -6.5 Sensor protein QseC compare
MPMX20_03705 -1.7 -7.5 Diaminopimelate decarboxylase compare
MPMX20_03756 -1.7 -4.0 FAD assembly factor SdhE compare
MPMX20_03394 -1.7 -2.9 Cytoskeleton protein RodZ compare
MPMX20_04487 -1.7 -8.1 UDP-N-acetylglucosamine 2-epimerase compare
MPMX20_02826 -1.7 -2.1 Cold shock-like protein CspB compare
MPMX20_00708 -1.6 -4.2 Aerobic respiration control protein ArcA compare
MPMX20_04485 -1.6 -4.1 dTDP-fucosamine acetyltransferase compare
MPMX20_03248 -1.6 -2.8 Colicin V production protein compare
MPMX20_00108 -1.6 -7.5 hypothetical protein compare
MPMX20_00386 -1.6 -2.2 hypothetical protein compare
MPMX20_03153 -1.6 -1.3 hypothetical protein compare
MPMX20_01283 -1.6 -2.9 Cold shock-like protein CspE compare
MPMX20_00086 -1.6 -1.3 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03562 -1.6 -4.2 Transcriptional repressor MprA compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source L-Malic acid disodium salt monohydrate in Enterobacter sp. TBS_079

For carbon source L-Malic acid disodium salt monohydrate across organisms