Experiment set9S307 for Enterobacter sp. TBS_079

Compare to:

D-Gluconic Acid sodium salt carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03771 -7.1 -7.0 D-3-phosphoglycerate dehydrogenase compare
MPMX20_01566 -7.1 -9.7 Phosphoserine aminotransferase compare
MPMX20_00831 -6.8 -4.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_00693 -6.3 -8.7 Phosphoserine phosphatase compare
MPMX20_00928 -6.3 -7.5 Gamma-glutamyl phosphate reductase compare
MPMX20_03681 -6.2 -12.6 Amino-acid acetyltransferase compare
MPMX20_03338 -6.2 -4.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03003 -5.9 -9.1 Histidinol-phosphate aminotransferase compare
MPMX20_01097 -5.9 -4.1 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04521 -5.9 -5.7 Acetylglutamate kinase compare
MPMX20_01098 -5.8 -5.7 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03004 -5.8 -8.0 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04077 -5.8 -9.6 Argininosuccinate synthase compare
MPMX20_04523 -5.7 -6.8 Acetylornithine deacetylase compare
MPMX20_04499 -5.7 -12.8 Dihydroxy-acid dehydratase compare
MPMX20_04531 -5.7 -10.3 Cystathionine gamma-synthase compare
MPMX20_00927 -5.7 -14.3 Glutamate 5-kinase compare
MPMX20_00230 -5.7 -7.8 Homoserine O-succinyltransferase compare
MPMX20_03468 -5.6 -6.6 T-protein compare
MPMX20_03354 -5.5 -12.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03264 -5.5 -5.4 Chorismate synthase compare
MPMX20_04520 -5.5 -8.4 Argininosuccinate lyase compare
MPMX20_03007 -5.4 -7.4 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03006 -5.4 -8.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00544 -5.4 -7.4 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02755 -5.4 -5.2 KHG/KDPG aldolase compare
MPMX20_03001 -5.4 -12.0 ATP phosphoribosyltransferase compare
MPMX20_00225 -5.3 -11.9 Phosphoribosylamine--glycine ligase compare
MPMX20_04162 -5.3 -3.7 3-dehydroquinate dehydratase compare
MPMX20_03426 -5.3 -16.3 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03002 -5.2 -13.4 Histidinol dehydrogenase compare
MPMX20_04496 -5.2 -6.2 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01567 -5.1 -3.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_02494 -5.1 -6.1 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00712 -5.1 -12.8 Threonine synthase compare
MPMX20_00226 -5.1 -10.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03986 -5.1 -5.0 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01741 -5.1 -3.5 Dihydroorotase compare
MPMX20_00711 -5.0 -13.0 Homoserine kinase compare
MPMX20_00093 -5.0 -3.5 Orotate phosphoribosyltransferase compare
MPMX20_00740 -5.0 -9.6 Carbamoyl-phosphate synthase large chain compare
MPMX20_01596 -5.0 -16.0 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02514 -5.0 -7.6 Tryptophan synthase alpha chain compare
MPMX20_04189 -5.0 -3.4 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01950 -5.0 -3.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00710 -4.9 -16.8 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_03018 -4.8 -3.3 hypothetical protein compare
MPMX20_03852 -4.8 -15.7 Cystathionine beta-lyase MetC compare
MPMX20_01367 -4.8 -8.6 Tol-Pal system protein TolR compare
MPMX20_00976 -4.8 -3.3 Pyrroline-5-carboxylate reductase compare
MPMX20_03008 -4.7 -9.1 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01370 -4.6 -7.7 Peptidoglycan-associated lipoprotein compare
MPMX20_01354 -4.6 -4.4 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00768 -4.6 -15.1 3-isopropylmalate dehydrogenase compare
MPMX20_01548 -4.6 -4.5 putative ABC transporter ATP-binding/permease protein compare
MPMX20_00739 -4.6 -4.5 Carbamoyl-phosphate synthase small chain compare
MPMX20_01366 -4.5 -7.7 Tol-Pal system protein TolQ compare
MPMX20_03247 -4.5 -10.5 Amidophosphoribosyltransferase compare
MPMX20_04498 -4.4 -12.1 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_04444 -4.4 -2.0 Sec-independent protein translocase protein TatA compare
MPMX20_04278 -4.4 -3.0 3-dehydroquinate synthase compare
MPMX20_03005 -4.4 -9.7 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04522 -4.4 -9.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01369 -4.4 -13.1 Tol-Pal system protein TolB compare
MPMX20_01362 -4.4 -5.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04524 -4.3 -18.4 Phosphoenolpyruvate carboxylase compare
MPMX20_01368 -4.2 -7.1 hypothetical protein compare
MPMX20_01984 -4.2 -2.9 Ribonuclease T compare
MPMX20_04442 -4.2 -8.5 Sec-independent protein translocase protein TatC compare
MPMX20_00767 -4.1 -12.7 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_01349 -4.0 -7.7 Citrate synthase compare
MPMX20_00556 -4.0 -12.1 Ornithine carbamoyltransferase subunit F compare
MPMX20_04497 -3.8 -9.3 HTH-type transcriptional regulator GltC compare
MPMX20_00106 -3.8 -3.7 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00102 -3.8 -2.6 hypothetical protein compare
MPMX20_01607 -3.8 -6.3 Outer membrane protein A compare
MPMX20_04483 -3.8 -2.6 Lipid III flippase compare
MPMX20_01029 -3.8 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_00766 -3.8 -7.8 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04275 -3.7 -2.6 Ribulose-phosphate 3-epimerase compare
MPMX20_02591 -3.7 -8.2 DNA-binding protein H-NS compare
MPMX20_01549 -3.7 -5.0 ATP-binding/permease protein CydD compare
MPMX20_04469 -3.7 -5.0 Adenylate cyclase compare
MPMX20_04119 -3.7 -2.5 DNA polymerase III subunit chi compare
MPMX20_04768 -3.5 -10.9 hypothetical protein compare
MPMX20_03022 -3.5 -4.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03010 -3.4 -5.7 UDP-glucose 4-epimerase compare
MPMX20_04650 -3.4 -4.7 tRNA modification GTPase MnmE compare
MPMX20_01028 -3.4 -3.3 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_01355 -3.4 -1.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02511 -3.4 -13.7 Bifunctional protein TrpGD compare
MPMX20_03019 -3.4 -17.6 hypothetical protein compare
MPMX20_03466 -3.4 -8.7 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02574 -3.3 -4.4 putative intracellular septation protein A compare
MPMX20_02512 -3.2 -10.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03685 -3.2 -3.1 RecBCD enzyme subunit RecC compare
MPMX20_01551 -3.2 -6.7 Leucine-responsive regulatory protein compare
MPMX20_03382 -3.2 -2.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01361 -3.1 -9.9 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_02513 -3.1 -11.1 Tryptophan synthase beta chain compare
MPMX20_00453 -3.1 -2.5 RNA-binding protein Hfq compare
MPMX20_00110 -3.0 -19.0 hypothetical protein compare
MPMX20_01286 -3.0 -2.2 Sec-independent protein translocase protein TatE compare
MPMX20_04626 -3.0 -5.0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00109 -3.0 -19.4 hypothetical protein compare
MPMX20_04642 -3.0 -2.9 Phosphate import ATP-binding protein PstB compare
MPMX20_04197 -3.0 -6.0 Trk system potassium uptake protein TrkA compare
MPMX20_00197 -3.0 -2.9 tRNA-Tyr compare
MPMX20_04110 -3.0 -6.7 Nitrogen regulatory protein compare
MPMX20_01334 -3.0 -10.0 Phosphoglucomutase compare
MPMX20_04440 -3.0 -2.6 Transcription antitermination protein RfaH compare
MPMX20_03090 -3.0 -1.9 Methionine--tRNA ligase compare
MPMX20_04530 -2.9 -11.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_01550 -2.9 -3.4 Thioredoxin reductase compare
MPMX20_04133 -2.8 -6.5 Stringent starvation protein A compare
MPMX20_02510 -2.8 -12.4 Anthranilate synthase component 1 compare
MPMX20_03683 -2.8 -4.2 RecBCD enzyme subunit RecB compare
MPMX20_04529 -2.7 -9.0 5,10-methylenetetrahydrofolate reductase compare
MPMX20_03308 -2.7 -8.1 Cysteine synthase A compare
MPMX20_03227 -2.7 -5.9 Phosphate acetyltransferase compare
MPMX20_00807 -2.7 -3.1 Pyruvate dehydrogenase E1 component compare
MPMX20_01030 -2.6 -10.3 Lon protease compare
MPMX20_02476 -2.6 -3.5 Putrescine export system permease protein SapC compare
MPMX20_04601 -2.6 -3.5 DNA polymerase I compare
MPMX20_04595 -2.6 -3.1 Glutamine synthetase compare
MPMX20_01901 -2.6 -2.5 Integration host factor subunit alpha compare
MPMX20_01552 -2.6 -4.5 hypothetical protein compare
MPMX20_03641 -2.5 -8.1 Phosphoadenosine phosphosulfate reductase compare
MPMX20_00769 -2.4 -9.0 2-isopropylmalate synthase compare
MPMX20_03407 -2.4 -4.5 Chaperone protein HscA compare
MPMX20_03705 -2.4 -10.1 Diaminopimelate decarboxylase compare
MPMX20_03013 -2.4 -12.0 dTDP-glucose 4,6-dehydratase compare
MPMX20_04279 -2.3 -4.1 Shikimate kinase 1 compare
MPMX20_04276 -2.3 -7.0 DNA adenine methylase compare
MPMX20_04262 -2.3 -8.0 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_01382 -2.3 -3.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03310 -2.3 -4.9 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03780 -2.2 -5.5 Transketolase 1 compare
MPMX20_03469 -2.2 -8.8 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_03209 -2.2 -4.4 NADH-quinone oxidoreductase subunit K compare
MPMX20_04532 -2.2 -3.1 Met repressor compare
MPMX20_00087 -2.1 -3.3 DNA-directed RNA polymerase subunit omega compare
MPMX20_01969 -2.1 -4.4 Carbonic anhydrase 1 compare
MPMX20_00773 -2.0 -11.4 Catabolite repressor/activator compare
MPMX20_02477 -2.0 -4.2 Peptide transport system ATP-binding protein SapD compare
MPMX20_00105 -2.0 -8.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04557 -2.0 -8.1 Sensor histidine kinase CpxA compare
MPMX20_04640 -2.0 -3.2 Phosphate transport system permease protein PstC compare
MPMX20_00899 -1.9 -2.5 Ribonuclease HI compare
MPMX20_04140 -1.9 -8.1 Malate dehydrogenase compare
MPMX20_04467 -1.9 -8.2 Diaminopimelate epimerase compare
MPMX20_03021 -1.9 -6.7 hypothetical protein compare
MPMX20_02646 -1.9 -2.3 hypothetical protein compare
MPMX20_03248 -1.9 -2.3 Colicin V production protein compare
MPMX20_02478 -1.9 -7.4 Putrescine export system ATP-binding protein SapF compare
MPMX20_03012 -1.9 -10.0 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02701 -1.9 -2.5 Fatty acid metabolism regulator protein compare
MPMX20_04489 -1.9 -10.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03408 -1.9 -2.4 Co-chaperone protein HscB compare
MPMX20_02770 -1.8 -5.8 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03490 -1.8 -6.4 SsrA-binding protein compare
MPMX20_01322 -1.8 -7.7 N-acetylglucosamine repressor compare
MPMX20_02475 -1.8 -4.2 Putrescine export system permease protein SapB compare
MPMX20_04641 -1.8 -3.3 Phosphate transport system permease protein PstA compare
MPMX20_00108 -1.8 -10.4 hypothetical protein compare
MPMX20_02672 -1.8 -14.0 hypothetical protein compare
MPMX20_03706 -1.7 -5.9 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_00514 -1.7 -7.4 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00721 -1.7 -3.4 Chaperone protein DnaJ compare
MPMX20_00745 -1.7 -5.4 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03226 -1.7 -4.3 Acetate kinase compare
MPMX20_03047 -1.7 -5.2 dCTP deaminase compare
MPMX20_00812 -1.7 -6.9 Aconitate hydratase B compare
MPMX20_00086 -1.6 -2.6 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03642 -1.6 -6.0 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_04443 -1.6 -1.3 Sec-independent protein translocase protein TatB compare
MPMX20_03215 -1.6 -2.4 NADH-quinone oxidoreductase subunit E compare
MPMX20_00708 -1.6 -4.7 Aerobic respiration control protein ArcA compare
MPMX20_03636 -1.6 -5.2 Adenylyl-sulfate kinase compare
MPMX20_04038 -1.6 -5.2 Glucitol operon repressor compare
MPMX20_00241 -1.6 -7.7 Glucose-6-phosphate isomerase compare
MPMX20_00570 -1.6 -9.3 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03207 -1.6 -6.4 NADH-quinone oxidoreductase subunit M compare
MPMX20_03210 -1.6 -5.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_00747 -1.6 -3.8 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01377 -1.6 -5.7 Quinolinate synthase A compare
MPMX20_01447 -1.6 -5.3 Transcriptional regulator MntR compare
MPMX20_03509 -1.5 -1.8 hypothetical protein compare
MPMX20_02635 -1.5 -2.6 Release factor glutamine methyltransferase compare
MPMX20_03037 -1.5 -5.4 hypothetical protein compare
MPMX20_04692 -1.5 -1.1 hypothetical protein compare
MPMX20_02549 -1.5 -4.4 hypothetical protein compare
MPMX20_04597 -1.5 -5.3 DNA-binding transcriptional regulator NtrC compare
MPMX20_01156 -1.5 -2.4 hypothetical protein compare
MPMX20_01570 -1.5 -2.0 Integration host factor subunit beta compare
MPMX20_03212 -1.5 -4.7 NADH-quinone oxidoreductase subunit H compare
MPMX20_03267 -1.5 -3.3 Phosphohistidine phosphatase SixA compare
MPMX20_04452 -1.4 -6.6 HTH-type transcriptional regulator MetR compare
MPMX20_03643 -1.4 -4.8 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_02593 -1.4 -9.9 Regulator of RpoS compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source D-Gluconic Acid sodium salt across organisms