Experiment set9IT078 for Sinorhizobium meliloti 1021

Compare to:

pipercolic acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc00794 +2.5 19.3 two-component response regulator compare
SMc01506 +2.5 18.2 RNA polymerase sigma factor compare
SMc01504 +2.2 13.9 two-component response regulator compare
SMc03140 +1.9 7.2 transcriptional regulator compare
SMa0113 +1.5 13.6 Sensor histidine kinase compare
SMc01346 +1.4 3.3 leucyl/phenylalanyl-tRNA--protein transferase compare
SMc01418 +1.3 5.6 signal peptide protein compare
SMc04327 +1.3 1.7 hypothetical protein compare
SM_b21679 +1.3 1.7 hypothetical protein compare
SMc02084 +1.2 1.1 biopolymer transport transmembrane protein compare
SMa1174 +1.1 1.8 hypothetical protein compare
SMc01280 +1.0 2.5 protease compare
SMc04453 +1.0 1.5 hypothetical protein compare
SM_b20075 +1.0 2.3 hypothetical protein compare
SMc03800 +0.9 2.4 hypothetical protein compare
SMc01144 +0.9 2.8 ribonuclease PH compare
SMc01275 +0.9 5.7 ribosomal large subunit pseudouridine synthase C protein compare
SMc00239 +0.9 1.1 hypothetical protein compare
SMc03973 +0.9 5.9 hypothetical protein compare
SM_b20884 +0.9 3.4 hypothetical protein compare
SM_b20387 +0.9 1.6 transcriptional regulator compare
SMc02906 +0.9 1.1 hypothetical protein compare
SMa1160 +0.8 3.7 hypothetical protein compare
SMc01419 +0.8 2.1 RNA polymerase sigma factor protein compare
SMc00800 +0.8 1.6 hypothetical protein compare
SMc00029 +0.8 2.0 hypothetical protein compare
SMc03006 +0.8 1.3 chemotaxis regulator protein compare
SMc03066 +0.8 1.2 hypothetical protein compare
SMa0114 +0.8 5.4 two-component response regulator compare
SMc01337 +0.8 1.3 hypothetical protein compare
SMc03773 +0.8 3.2 hypothetical protein compare
SMc01765 +0.8 1.3 hypothetical protein compare
SMc02149 +0.8 1.0 hypothetical protein compare
SMc00854 +0.8 1.6 hypothetical protein compare
SM_b21173 +0.8 1.5 hypothetical protein compare
SMc04296 +0.8 0.5 cell division protein FtsZ compare
SMc05015 +0.7 1.7 recombinase compare
SMc03092 +0.7 2.9 transcriptional regulator compare
SMc04016 +0.7 5.4 homospermidine synthase compare
SM_b20021 +0.7 1.0 transcriptional regulator compare
SM_b20414 +0.7 1.1 hypothetical protein compare
SMc04389 +0.7 1.4 hydroxypyruvate reductase compare
SMa0748 +0.7 1.6 MucR family transcriptional regulator compare
SMc02306 +0.7 1.2 hypothetical protein compare
SMc00351 +0.7 1.2 hypothetical protein compare
SMc00369 +0.7 1.2 oxidoreductase compare
SMc01831 +0.7 1.0 urease accessory protein compare
SMc01183 +0.7 0.7 LexA repressor compare
SMc02052 +0.6 0.9 hypothetical protein compare
SMc01845 +0.6 0.8 transglycosylase transmembrane protein compare
SMc00648 +0.6 2.3 hypothetical protein compare
SM_b21569 +0.6 1.4 transcriptional regulator compare
SMc03824 +0.6 2.4 transcriptional regulator compare
SMc02338 +0.6 1.5 periplasmic binding ABC transporter protein compare
SMc01933 +0.6 1.3 hypothetical protein compare
SMc00801 +0.6 2.0 hypothetical protein compare
SMc00019 +0.6 1.6 hypothetical protein compare
SM_b21551 +0.6 1.0 hypothetical protein compare
SMa1597 +0.6 2.3 Pilus assembly chaperone compare
SMa1400 +0.6 2.2 acyl-CoA dehydrogenase compare
SMc00665 +0.6 1.9 hypothetical protein compare
SMc03785 +0.6 1.5 dinucleoside polyphosphate hydrolase compare
SMc01262 +0.6 2.3 peptide deformylase compare
SMa1894 +0.6 0.9 methionine sulfoxide reductase B compare
SMc05020 +0.6 1.2 entericidin A precursor compare
SMc02639 +0.6 1.3 transcriptional regulator compare
SM_b21187 +0.6 4.0 LacI family transcriptional regulator compare
SMc02714 +0.6 1.1 hypothetical protein compare
SMc00718 +0.6 1.9 hypothetical protein compare
SMc00565 +0.6 1.0 50S ribosomal protein L9 compare
SMc02485 +0.6 1.2 signal peptide protein compare
SMc02691 +0.6 2.2 membrane transporter compare
SMc04437 +0.6 2.8 hypothetical protein compare
SMc02718 +0.6 0.6 hypothetical protein compare
SMc00605 +0.5 1.4 hypothetical protein compare
SM_b20701 +0.5 0.8 hypothetical protein compare
SMa2034 +0.5 0.9 hypothetical protein compare
SMc02107 +0.5 0.9 hypothetical protein compare
SMc00522 +0.5 3.6 ATP-dependent RNA helicase compare
SMa1162 +0.5 3.4 hypothetical protein compare
SMc00974 +0.5 1.5 RNA methyltransferase compare
SM_b20889 +0.5 1.9 hypothetical protein compare
SMc04345 +0.5 1.5 hypothetical protein compare
SMa0838 +0.5 1.0 SyrA protein involved in EPS production compare
SMc04339 +0.5 3.5 hypothetical protein compare
SMa1232 +0.5 2.3 NapC membrane-bound tetraheme cytochrome c subunit compare
SMc00470 +0.5 2.0 hypothetical protein compare
SMa2059 +0.5 2.5 hypothetical protein compare
SM_b20055 +0.5 0.7 transcriptional regulator compare
SMa0144 +0.5 0.6 hypothetical protein compare
SMc03141 +0.5 2.2 hypothetical protein compare
SMc03127 +0.5 0.8 ABC transporter permease compare
SM_b20664 +0.5 3.4 GntR family transcriptional regulator compare
SMa1471 +0.5 2.6 hypothetical protein compare
SMc01704 +0.5 2.9 hypothetical protein compare
SMc00496 +0.5 0.7 hypothetical protein compare
SMc03050 +0.5 1.3 flagellar biosynthesis regulatory protein FlaF compare
SMa0125 +0.5 1.8 co-chaperonin GroES compare
SMa2219 +0.5 2.3 decarboxylase compare
SMc02859 +0.5 1.5 hypothetical protein compare
SMc01519 +0.5 1.1 hypothetical protein compare
SMa1696 +0.5 3.3 Sensor histidine kinase compare
SM_b21421 +0.5 1.3 sugar uptake ABC transporter substrate-binding protein precursor compare
SM_b20547 +0.5 1.5 hypothetical protein compare
SMc02598 +0.5 2.6 nicotinate-nucleotide pyrophosphorylase carboxylating protein compare
SM_b21398 +0.5 1.7 hypothetical protein compare
SMa1757 +0.5 1.2 Short chain compare
SMa1808 +0.5 1.2 hypothetical protein compare
SMc02886 +0.5 1.1 signal peptide protein compare
SM_b21159 +0.5 1.5 short-chain dehydrogenase compare
SMc02381 +0.5 1.4 hypothetical protein compare
SM_b20662 +0.5 2.0 oxidoreductase compare
SMa0160 +0.5 3.1 GntR family transcriptional regulator compare
SMc01930 +0.5 1.3 hypothetical protein compare
SMc00347 +0.5 0.9 nucleoside diphosphate kinase regulator compare
SMa0909 +0.5 1.6 hypothetical protein compare
SM_b20549 +0.5 1.4 hypothetical protein compare
SMc04337 +0.5 2.7 hypothetical protein compare
SMc00143 +0.5 0.8 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SM_b20891 +0.5 1.9 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) compare
SMc01653 +0.5 1.4 ABC transporter ATP-binding protein compare
SM_b21669 +0.5 1.4 hypothetical protein compare
SMc00944 +0.5 2.3 hypothetical protein compare
SM_b21471 +0.5 1.4 hypothetical protein compare
SMc04344 +0.5 0.9 signal peptide protein compare
SMa0736 +0.5 1.1 hypothetical protein compare
SM_b21218 +0.5 1.7 glucosamine-6-phosphate deaminase, isomerizing (EC 3.5.99.6) (from data) compare
SMc00170 +0.5 2.0 transcription regulator HSL-dependent protein compare
SMc00345 +0.5 1.8 hypothetical protein compare
SMc03284 +0.4 1.7 hypothetical protein compare
SM_b20011 +0.4 2.1 hypothetical protein compare
SMc00976 +0.4 1.1 enoyl-CoA hydratase compare
SM_b21678 +0.4 1.5 hypothetical protein compare
SMc04013 +0.4 2.4 aminodeoxychorismate synthase compare
SMa1185 +0.4 2.3 NosY permease compare
SMc04333 +0.4 2.0 hypothetical protein compare
SMc04182 +0.4 0.8 hypothetical protein compare
SMc02904 +0.4 1.1 hypothetical protein compare
SMc01089 +0.4 0.7 hypothetical protein compare
SMc02907 +0.4 1.6 amino acid efflux transmembrane protein compare
SMc01178 +0.4 0.9 multidrug transmembrane resistance signal peptide protein compare
SMa0335 +0.4 1.2 3-ketoacyl-ACP reductase compare
SMa2253 +0.4 0.8 hypothetical protein compare
SMc03019 +0.4 1.1 flagellar motor switch protein G compare
SMa1149 +0.4 1.9 hypothetical protein compare
SMc00576 +0.4 1.3 hypothetical protein compare
SMc01186 +0.4 1.1 hypothetical protein compare
SMc02171 +0.4 1.7 periplasmic binding ABC transporter protein compare
SMc01043 +0.4 2.9 nitrogen assimilation regulatory protein compare
SMc04881 +0.4 1.6 virulence associated protein compare
SMa1570 +0.4 0.7 PilA2 pilus assembly protein compare
SMc00647 +0.4 1.4 ribosomal large subunit pseudouridine synthase compare
SMc02174 +0.4 1.5 hypothetical protein compare
SMa0955 +0.4 0.7 GntR family transcriptional regulator compare
SMc03008 +0.4 0.6 chemotaxis protein compare
SMc02474 +0.4 1.4 ABC transporter ATP-binding protein compare
SMc01132 +0.4 1.6 hypothetical protein compare
SMc00006 +0.4 1.0 hypothetical protein compare
SMc04020 +0.4 1.7 hypothetical protein compare
SMa0085 +0.4 1.0 dehydrogenase compare
SMc00241 +0.4 1.1 transcriptional regulator compare
SMc00080 +0.4 1.6 hypothetical protein compare
SM_b20462 +0.4 2.2 cellulase H protein compare
SMa2309 +0.4 1.9 ABC transporter permease compare
SMa1124 +0.4 0.8 hypothetical protein compare
SM_b20722 +0.4 2.3 two-component response regulator protein compare
SM_b21191 +0.4 2.3 surface saccharide ABC transporter ATP-binding/membrane spanning protein compare
SMa1754 +0.4 2.0 ABC transporter ATP-binding protein compare
SM_b20433 +0.4 1.2 ectoine utilization protein EutC compare
SM_b20143 +0.4 0.7 oligopeptide ABC transporter permease compare
SMc01427 +0.4 0.8 hypothetical protein compare
SMc03281 +0.4 1.8 transposase compare
SM_b20081 +0.4 1.0 hypothetical protein compare
SM_b21170 +0.4 1.4 guanylate kinase compare
SMc00820 +0.4 2.1 transcriptional regulator compare
SMa0489 +0.4 1.4 ABC transporter ATP-binding protein compare
SMa0396 +0.4 2.2 ABC transporter permease compare
SMc02989 +0.4 0.9 hypothetical protein compare
SMc00698 +0.4 1.0 transcriptional regulator compare
SM_b20435 +0.4 1.8 hypothetical protein compare
SMc00679 +0.4 1.4 transcriptional regulator compare
SMc02370 +0.4 3.4 aminopeptidase N compare
SMc02554 +0.4 1.3 hypothetical protein compare
SMa1259 +0.4 2.5 hypothetical protein compare
SMa1902 +0.4 1.5 hypothetical protein compare
SMc02279 +0.4 2.3 signal peptide protein compare
SMc00247 +0.4 2.2 phosphatidylcholine synthase compare
SMa1243 +0.4 1.3 Azu1 pseudoazurin compare
SMa1195 +0.4 1.3 hypothetical protein compare
SMc02976 +0.4 1.5 transcriptional regulator compare
SMa1878 +0.4 1.8 transposase compare
SMa5020 +0.4 1.6 hypothetical protein compare
SM_b20909 +0.4 0.8 hypothetical protein compare
SMa1943 +0.4 1.3 transcriptional regulator compare
SM_b21099 +0.4 1.8 hypothetical protein compare
SMa1161 +0.4 1.5 hypothetical protein compare
SMc04456 +0.4 1.3 chaperone protein compare
SMc01143 +0.4 2.1 heat-inducible transcription repressor compare
SMc02236 +0.4 2.2 DNA repair nuclease, ligase-associated (TIGR04123) (from data) compare
SMa0249 +0.4 0.8 TRAP-type small permease component compare


Specific Phenotypes

For 27 genes in this experiment

For carbon source L-Pipecolic Acid in Sinorhizobium meliloti 1021

For carbon source L-Pipecolic Acid across organisms