| | gene | name | fitness | t score | description | |
|---|
| b0902 | pflA | -5.8 | -4.0 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0903 | pflB | -4.6 | -9.4 | pyruvate formate lyase I (NCBI) | compare |
| b4058 | uvrA | -4.3 | -19.9 | excinuclease ABC subunit A (NCBI) | conserved |
| b1334 | fnr | -4.1 | -2.8 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0779 | uvrB | -4.1 | -10.5 | excinuclease ABC subunit B (NCBI) | conserved |
| b4201 | priB | -3.9 | -2.7 | primosomal replication protein N (NCBI) | compare |
| b3930 | menA | -3.9 | -17.6 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2688 | gshA | -3.6 | -7.3 | glutamate--cysteine ligase (NCBI) | compare |
| b0472 | recR | -3.5 | -9.3 | recombination protein RecR (NCBI) | conserved |
| b2565 | recO | -3.5 | -7.0 | DNA repair protein RecO (NCBI) | conserved |
| b1429 | tehA | -3.5 | -2.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4237 | nrdG | -3.4 | -11.9 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b1524 | yneH | -3.3 | -1.4 | predicted glutaminase (NCBI) | compare |
| b4238 | nrdD | -3.3 | -18.8 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b2947 | gshB | -3.3 | -3.2 | glutathione synthetase (NCBI) | compare |
| b1913 | uvrC | -3.2 | -8.7 | excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) | conserved |
| b3700 | recF | -3.0 | -13.0 | recombination protein F (NCBI) | conserved |
| b4025 | pgi | -3.0 | -8.6 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3857 | mobA | -3.0 | -7.9 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b1850 | eda | -3.0 | -2.8 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2501 | ppk | -2.9 | -9.0 | polyphosphate kinase (NCBI) | compare |
| b3237 | argR | -2.9 | -4.8 | arginine repressor (NCBI) | compare |
| b1677 | lpp | -2.9 | -3.3 | murein lipoprotein (NCBI) | compare |
| b0729 | sucD | -2.8 | -4.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b0623 | cspE | -2.7 | -2.2 | cold shock protein E (NCBI) | compare |
| b3164 | pnp | -2.6 | -2.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0728 | sucC | -2.6 | -7.0 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0785 | moaE | -2.6 | -4.4 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1346 | ydaQ | -2.6 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3836 | b3836 | -2.6 | -6.5 | orf, hypothetical protein (VIMSS) | compare |
| b0908 | aroA | -2.6 | -8.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b0145 | dksA | -2.5 | -2.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0783 | moaC | -2.5 | -6.7 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b3617 | kbl | -2.5 | -7.5 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b0049 | apaH | -2.4 | -3.2 | diadenosinetetraphosphatase (NCBI) | compare |
| b2168 | fruK | -2.4 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b1954 | dsrA | -2.3 | -2.7 | regulatory antisense RNA (NCBI) | compare |
| b3839 | tatC | -2.3 | -6.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3253 | yhdH | -2.3 | -9.8 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b1753 | ynjA | -2.3 | -2.3 | hypothetical protein (NCBI) | compare |
| b0053 | surA | -2.3 | -5.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3792 | wzxE | -2.3 | -5.8 | O-antigen translocase (NCBI) | compare |
| b2620 | smpB | -2.3 | -1.5 | SsrA-binding protein (NCBI) | compare |
| b2579 | yfiD | -2.3 | -2.6 | pyruvate formate lyase subunit (NCBI) | compare |
| b0737 | tolQ | -2.3 | -2.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2576 | srmB | -2.2 | -3.3 | ATP-dependent RNA helicase (NCBI) | compare |
| b0763 | modA | -2.2 | -6.3 | molybdate transporter subunit (NCBI) | compare |
| b0740 | tolB | -2.2 | -3.3 | translocation protein TolB precursor (NCBI) | compare |
| b0741 | pal | -2.2 | -3.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0784 | moaD | -2.2 | -3.1 | molybdopterin synthase, small subunit (NCBI) | compare |
| b3390 | aroK | -2.2 | -2.0 | shikimate kinase I (NCBI) | compare |
| b3021 | ygiT | -2.2 | -2.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4138 | dcuA | -2.2 | -10.6 | C4-dicarboxylate antiporter (NCBI) | compare |
| b0826 | moeB | -2.1 | -6.5 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b0088 | murD | -2.1 | -2.7 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b0781 | moaA | -2.1 | -7.3 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b4402 | yjjY | -2.1 | -1.2 | hypothetical protein (NCBI) | compare |
| b0014 | dnaK | -2.1 | -2.3 | molecular chaperone DnaK (NCBI) | compare |
| b2830 | nudH | -2.0 | -1.3 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4175 | hflC | -2.0 | -8.5 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b0764 | modB | -2.0 | -4.3 | molybdate ABC transporter permease protein (NCBI) | compare |
| b0765 | modC | -2.0 | -6.5 | molybdate transporter subunit (NCBI) | compare |
| b3652 | recG | -2.0 | -8.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b1175 | minD | -2.0 | -4.0 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2329 | aroC | -2.0 | -5.2 | chorismate synthase (NCBI) | compare |
| b4535 | yniD | -2.0 | -1.3 | predicted protein (RefSeq) | compare |
| b3500 | gor | -2.0 | -1.3 | glutathione reductase (NCBI) | compare |
| b1476 | fdnI | -2.0 | -0.8 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0009 | mog | -1.9 | -6.5 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b1818 | manY | -1.9 | -2.2 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b0605 | ahpC | -1.9 | -4.2 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3838 | tatB | -1.9 | -8.0 | sec-independent translocase (NCBI) | compare |
| b3229 | sspA | -1.8 | -2.4 | stringent starvation protein A (NCBI) | compare |
| b1830 | prc | -1.8 | -4.6 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3616 | tdh | -1.8 | -5.5 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b3408 | feoA | -1.8 | -10.4 | ferrous iron transport protein A (NCBI) | compare |
| b4557 | yidD | -1.8 | -3.5 | hypothetical protein (NCBI) | compare |
| b0739 | tolA | -1.8 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1942 | fliJ | -1.8 | -1.3 | flagellar biosynthesis chaperone (NCBI) | compare |
| b3409 | feoB | -1.8 | -13.4 | ferrous iron transport protein B (NCBI) | compare |
| b4260 | pepA | -1.8 | -9.9 | leucyl aminopeptidase (NCBI) | compare |
| b2261 | menC | -1.8 | -5.9 | O-succinylbenzoate synthase (NCBI) | compare |
| b3183 | obgE | -1.8 | -1.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3813 | uvrD | -1.8 | -10.8 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b4503 | yafF | -1.7 | -1.0 | no description | compare |
| b3726 | pstA | -1.7 | -4.0 | phosphate transporter subunit (NCBI) | compare |
| b0239 | frsA | -1.7 | -4.6 | fermentation/respiration switch protein (NCBI) | compare |
| b3871 | bipA | -1.7 | -8.6 | GTP-binding protein (NCBI) | compare |
| b3469 | zntA | -1.7 | -5.4 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0222 | lpcA | -1.7 | -2.8 | phosphoheptose isomerase (NCBI) | compare |
| b0218 | yafU | -1.7 | -1.9 | predicted inner membrane protein (RefSeq) | compare |
| b1936 | intG | -1.7 | -1.1 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3163 | nlpI | -1.6 | -4.6 | hypothetical protein (NCBI) | compare |
| b4139 | aspA | -1.6 | -8.3 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3619 | rfaD | -1.6 | -2.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1273 | yciN | -1.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b0386 | proC | -1.6 | -4.6 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0738 | tolR | -1.6 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4450 | arcZ | -1.6 | -2.6 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b0149 | mrcB | -1.6 | -10.0 | penicillin-binding protein 1b (NCBI) | compare |
| b0406 | tgt | -1.6 | -5.7 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b0912 | ihfB | -1.6 | -2.7 | integration host factor subunit beta (NCBI) | compare |
| b2243 | glpC | -1.6 | -6.6 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI) | compare |
| b0471 | ybaB | -1.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b0237 | pepD | -1.5 | -6.8 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b3650 | spoT | -1.5 | -6.2 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2262 | menB | -1.5 | -4.2 | naphthoate synthase (NCBI) | compare |
| b2259 | pmrD | -1.5 | -1.0 | polymyxin resistance protein B (VIMSS) | compare |
| b3349 | slyD | -1.5 | -5.8 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b0688 | pgm | -1.5 | -2.8 | phosphoglucomutase (NCBI) | compare |
| b1503 | ydeR | -1.5 | -2.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4174 | hflK | -1.5 | -6.8 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1863 | ruvC | -1.5 | -1.0 | Holliday junction resolvase (NCBI) | compare |
| b2330 | yfcB | -1.5 | -1.0 | putative adenine-specific methylase (VIMSS) | compare |
| b0143 | pcnB | -1.5 | -4.3 | poly(A) polymerase I (VIMSS) | compare |
| b4179 | vacB | -1.5 | -4.7 | putative enzyme (VIMSS) | compare |
| b4435 | isrC | -1.5 | -1.8 | unknown RNA (NCBI) | compare |
| b0730 | mngR | -1.5 | -1.0 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b0827 | moeA | -1.5 | -4.2 | molybdopterin biosynthesis protein (NCBI) | compare |
| b4053 | alr | -1.5 | -7.1 | alanine racemase (NCBI) | compare |
| b4153 | frdB | -1.4 | -5.4 | fumarate reductase (anaerobic), Fe-S subunit (NCBI) | compare |
| b3162 | deaD | -1.4 | -2.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2181 | yejG | -1.4 | -3.7 | hypothetical protein (NCBI) | compare |
| b4431 | rprA | -1.4 | -1.9 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b1048 | mdoG | -1.4 | -4.5 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b1874 | cutC | -1.4 | -2.3 | copper homeostasis protein (NCBI) | compare |
| b3761 | trpT | -1.4 | -1.5 | tRNA-Trp (NCBI) | compare |
| b1348 | lar | -1.4 | -1.5 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b2241 | glpA | -1.4 | -8.1 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI) | compare |
| b1907 | tyrP | -1.4 | -3.9 | tyrosine transporter (NCBI) | compare |
| b1108 | ycfP | -1.4 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4414 | tff | -1.4 | -3.0 | unknown RNA (NCBI) | compare |
| b3868 | glnG | -1.4 | -4.2 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b3075 | ebgR | -1.4 | -3.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2569 | lepA | -1.3 | -3.1 | GTP-binding protein LepA (NCBI) | compare |
| b3727 | pstC | -1.3 | -4.6 | phosphate transporter subunit (NCBI) | compare |
| b4648 | ysaC | -1.3 | -2.4 | no description | compare |
| b0436 | tig | -1.3 | -5.4 | trigger factor (NCBI) | compare |
| b3032 | cpdA | -1.3 | -5.6 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b2531 | iscR | -1.3 | -1.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0685 | ybfE | -1.3 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3035 | tolC | -1.3 | -6.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1676 | pykF | -1.3 | -3.1 | pyruvate kinase (NCBI) | compare |
| b3247 | cafA | -1.3 | -7.1 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b3368 | cysG | -1.3 | -9.2 | fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase (NCBI) | compare |
| b3791 | rffA | -1.3 | -5.6 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4181 | yjfI | -1.3 | -1.9 | hypothetical protein (NCBI) | compare |
| b1380 | ldhA | -1.3 | -1.5 | D-lactate dehydrogenase (NCBI) | compare |
| b2479 | gcvR | -1.3 | -4.1 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3781 | trxA | -1.3 | -3.2 | thioredoxin 1 (VIMSS) | compare |
| b1591 | b1591 | -1.3 | -1.7 | putative oxidoreductase component (VIMSS) | compare |
| b1147 | ymfL | -1.3 | -2.2 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2237 | inaA | -1.3 | -3.1 | hypothetical protein (NCBI) | compare |
| b1607 | ydgC | -1.3 | -1.3 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1192 | ldcA | -1.3 | -3.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b4594 | ymgJ | -1.3 | -1.8 | hypothetical protein (RefSeq) | compare |
| b3609 | secB | -1.3 | -3.3 | export protein SecB (NCBI) | compare |
| b2362 | yfdS | -1.3 | -3.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0226 | dinJ | -1.3 | -3.4 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3026 | qseC | -1.3 | -2.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3753 | rbsR | -1.2 | -7.0 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b3613 | yibP | -1.2 | -0.8 | putative membrane protein (VIMSS) | compare |
| b3931 | hslU | -1.2 | -6.3 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1095 | fabF | -1.2 | -5.8 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b2313 | cvpA | -1.2 | -3.7 | membrane protein required for colicin V production (NCBI) | compare |
| b1269 | rluB | -1.2 | -2.7 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b4383 | deoB | -1.2 | -5.1 | phosphopentomutase (NCBI) | compare |
| b1049 | mdoH | -1.2 | -6.3 | glucosyltransferase MdoH (NCBI) | compare |
| b4460 | araH | -1.2 | -2.1 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1506 | yneL | -1.2 | -1.2 | predicted transcriptional regulator (NCBI) | compare |
| b4509 | ylcG | -1.2 | -2.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0888 | trxB | -1.2 | -2.4 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3790 | rffC | -1.2 | -4.4 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1161 | ycgX | -1.2 | -0.8 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.2 | -1.1 | glucose-inhibited division protein A (NCBI) | compare |
| b1970 | yedX | -1.2 | -2.8 | hypothetical protein (NCBI) | compare |
| b2101 | yegW | -1.2 | -3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1824 | yobF | -1.2 | -2.5 | hypothetical protein (NCBI) | compare |
| b0542 | renD | -1.2 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0212 | gloB | -1.1 | -2.1 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b1575 | dicB | -1.1 | -1.0 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b4045 | yjbJ | -1.1 | -2.4 | predicted stress response protein (NCBI) | compare |
| b1125 | potB | -1.1 | -3.4 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b4152 | frdC | -1.1 | -3.1 | fumarate reductase subunit C (NCBI) | compare |
| b0407 | yajC | -1.1 | -1.4 | preprotein translocase subunit YajC (NCBI) | compare |
| b3912 | cpxR | -1.1 | -4.4 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b2506 | yfgI | -1.1 | -2.1 | hypothetical protein (NCBI) | compare |
| b1064 | grxB | -1.1 | -4.3 | glutaredoxin 2 (Grx2) (NCBI) | compare |
| b1361 | ydaW | -1.1 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b2264 | menD | -1.1 | -4.5 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b3002 | yqhA | -1.1 | -1.9 | hypothetical protein (NCBI) | compare |
| b2937 | speB | -1.1 | -4.7 | agmatinase (NCBI) | compare |
| b3466 | yhhL | -1.1 | -3.0 | conserved inner membrane protein (NCBI) | compare |
| b4701 | sokX | -1.1 | -0.6 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2859 | ygeO | -1.1 | -1.5 | hypothetical protein (RefSeq) | compare |
| b4180 | rlmB | -1.1 | -5.1 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b3932 | hslV | -1.1 | -5.2 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b1905 | ftn | -1.1 | -5.4 | ferritin iron storage protein (cytoplasmic) (NCBI) | compare |
| b4171 | miaA | -1.1 | -1.9 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4702 | mgtL | -1.1 | -1.5 | regulatory leader peptide for mgtA (NCBI) | compare |