Experiment set9IT014 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Curcumin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0033 -3.2 -3.7 tryptophan synthase, alpha chain compare
Psyr_1544 -3.1 -6.5 SirA-like protein compare
Psyr_0951 -3.0 -4.7 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_3287 -2.9 -3.3 DNA topoisomerase I compare
Psyr_4740 -2.9 -8.4 thiazole-phosphate synthase compare
Psyr_0034 -2.8 -5.6 tryptophan synthase, beta chain compare
Psyr_4340 -2.8 -11.5 phosphomethylpyrimidine kinase, putative compare
Psyr_4341 -2.8 -7.7 thiamine-phosphate diphosphorylase compare
Psyr_0255 -2.3 -3.6 glutamate-cysteine ligase compare
Psyr_0487 -2.2 -3.5 glutathione synthase compare
Psyr_3419 -2.1 -5.3 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4686 -2.0 -7.1 8-amino-7-oxononanoate synthase compare
Psyr_4687 -2.0 -8.3 biotin synthase compare
Psyr_4683 -2.0 -6.9 dethiobiotin synthase compare
Psyr_4684 -1.9 -3.3 biotin synthesis protein BioC compare
Psyr_1613 -1.9 -4.0 septum site-determining protein MinC compare
Psyr_0475 -1.8 -4.1 Protein of unknown function YGGT compare
Psyr_4519 -1.8 -8.2 General substrate transporter:Major facilitator superfamily compare
Psyr_5132 -1.7 -2.9 Glucose-inhibited division protein A subfamily compare
Psyr_4091 -1.7 -4.6 8-oxo-dGTPase compare
Psyr_5135 -1.6 -0.9 Protein of unknown function DUF37 compare
Psyr_0454 -1.6 -5.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0835 -1.5 -6.0 transcriptional regulator, TraR/DksA family compare
Psyr_1910 -1.5 -5.2 VacJ-like lipoprotein compare
Psyr_4203 -1.5 -3.3 SsrA-binding protein compare
Psyr_4490 -1.5 -2.9 transcriptional regulator, DeoR family compare
Psyr_4830 -1.4 -2.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1663 -1.4 -4.3 phosphoribosylanthranilate isomerase compare
Psyr_4362 -1.4 -2.1 Rare lipoprotein A compare
Psyr_3675 -1.4 -2.8 adenosylcobinamide kinase compare
Psyr_5072 -1.4 -1.7 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_0393 -1.3 -4.3 Protein of unknown function DUF971 compare
Psyr_0574 -1.3 -4.4 protease FtsH subunit HflK compare
Psyr_5133 -1.3 -4.2 tRNA modification GTPase trmE compare
Psyr_0014 -1.3 -0.9 lipid A biosynthesis acyltransferase compare
Psyr_2591 -1.3 -4.9 transport system permease protein compare
Psyr_1140 -1.3 -3.0 Disulfide bond formation protein DsbB compare
Psyr_4139 -1.2 -3.9 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_0199 -1.2 -3.2 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_3665 -1.2 -4.0 conserved hypothetical protein compare
Psyr_3886 -1.2 -1.8 methionyl-tRNA synthetase compare
Psyr_1268 -1.2 -4.4 extracellular solute-binding protein, family 3:SLT compare
Psyr_0838 -1.2 -3.5 Rieske [2Fe-2S] region compare
Psyr_0826 -1.2 -5.6 glucose-6-phosphate isomerase compare
Psyr_4015 -1.1 -1.7 conserved domain protein compare
Psyr_4512 -1.1 -5.6 putative phage-related protein compare
Psyr_4566 -1.1 -6.7 Peptidase M23B compare
Psyr_2980 -1.1 -3.0 UDP-glucose pyrophosphorylase compare
Psyr_4882 -1.1 -5.2 protein translocase subunit secB compare
Psyr_3005 -1.1 -2.3 3-oxoadipate enol-lactonase compare
Psyr_3857 -1.1 -3.4 conserved hypothetical protein compare
Psyr_2592 -1.1 -3.1 transport system permease protein compare
Psyr_3904 -1.1 -5.3 Major intrinsic protein compare
Psyr_1097 -1.1 -1.2 glycine cleavage system H protein compare
Psyr_2150 -1.1 -2.2 protein of unknown function DUF903 compare
Psyr_1418 -1.1 -2.0 Radical SAM compare
Psyr_3791 -1.1 -3.2 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_1373 -1.0 -2.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0529 -1.0 -4.3 Glycosyl transferase, group 1 compare
Psyr_1953 -1.0 -1.7 conserved hypothetical protein compare
Psyr_1816 -1.0 -2.9 transcriptional regulator, GntR family compare
Psyr_2590 -1.0 -1.9 Periplasmic binding protein compare
Psyr_0170 -1.0 -3.1 heat shock protein Hsp15 compare
Psyr_2143 -1.0 -1.6 delta1-piperideine 2-carboxylate reductase compare
Psyr_0917 -1.0 -6.6 ABC-2 compare
Psyr_4151 -1.0 -1.4 Phosphocarrier HPr protein compare
Psyr_3604 -1.0 -2.7 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_0979 -1.0 -3.1 conserved hypothetical protein compare
Psyr_1963 -1.0 -3.8 Cyclic peptide transporter compare
Psyr_2669 -1.0 -2.6 Aminoglycoside phosphotransferase compare
Psyr_4115 -1.0 -1.7 phosphoheptose isomerase compare
Psyr_3627 -1.0 -2.6 OsmC-like protein compare
Psyr_3805 -1.0 -2.0 hypothetical protein compare
Psyr_2582 -1.0 -5.6 TonB-dependent siderophore receptor compare
Psyr_1419 -0.9 -2.0 preQ(0) biosynthesis protein QueC compare
Psyr_0603 -0.9 -3.9 N-acylglucosamine 2-epimerase compare
Psyr_2312 -0.9 -1.3 Protein of unknown function DUF24 compare
Psyr_1964 -0.9 -3.4 Protein of unknown function DUF323 compare
Psyr_0579 -0.9 -6.4 RNAse R compare
Psyr_0936 -0.9 -6.5 Glycosyl transferase, group 1 compare
Psyr_RNA28 -0.9 -1.8 tRNA-Val compare
Psyr_4991 -0.9 -1.7 hypothetical protein compare
Psyr_4336 -0.9 -1.7 ribosomal large subunit pseudouridine synthase E compare
Psyr_0184 -0.9 -2.2 Protein of unknown function DUF484 compare
Psyr_0918 -0.9 -6.4 ABC transporter compare
Psyr_4158 -0.9 -5.0 conserved hypothetical protein compare
Psyr_2593 -0.9 -2.0 ABC transporter compare
Psyr_1747 -0.9 -2.9 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4673 -0.9 -2.0 Coenzyme PQQ synthesis D compare
Psyr_4194 -0.8 -3.0 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3020 -0.8 -1.2 precorrin-4 C11-methyltransferase compare
Psyr_0982 -0.8 -2.8 conserved hypothetical protein compare
Psyr_3459 -0.8 -2.1 Helix-turn-helix, Fis-type compare
Psyr_4416 -0.8 -2.2 precorrin-8X methylmutase compare
Psyr_1930 -0.8 -2.8 hypothetical protein compare
Psyr_0674 -0.8 -1.3 Protein of unknown function UPF0029 compare
Psyr_4838 -0.8 -1.8 transcriptional regulator, MerR family compare
Psyr_0831 -0.8 -1.4 Two-component response regulator CbrB compare
Psyr_2784 -0.8 -3.5 phage-related conserved hypothetical protein compare
Psyr_1371 -0.8 -3.6 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0849 -0.8 -5.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3698 -0.8 -2.7 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0791 -0.8 -0.9 MOSC compare
Psyr_4386 -0.8 -1.7 conserved hypothetical protein compare
Psyr_3241 -0.8 -2.9 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_1965 -0.8 -2.8 Twin-arginine translocation pathway signal compare
Psyr_3776 -0.8 -2.8 Cytosine deaminase compare
Psyr_4774 -0.8 -1.2 Hypothetical protein compare
Psyr_3427 -0.8 -2.3 conserved hypothetical protein compare
Psyr_1783 -0.8 -1.8 CDS compare
Psyr_0571 -0.7 -2.7 tRNA isopentenyltransferase compare
Psyr_0528 -0.7 -2.1 Carbamoyltransferase compare
Psyr_2396 -0.7 -2.1 Tartrate dehydrogenase compare
Psyr_2269 -0.7 -3.2 GTP cyclohydrolase I compare
Psyr_1408 -0.7 -1.6 Holliday junction endonuclease RuvC compare
Psyr_1924 -0.7 -3.0 hypothetical protein compare
Psyr_2088 -0.7 -1.2 2-methylaconitate cis-trans isomerase compare
Psyr_3906 -0.7 -0.9 regulatory protein, DeoR compare
Psyr_4682 -0.7 -1.9 conserved hypothetical protein compare
Psyr_0916 -0.7 -4.9 GDP-mannose 4,6-dehydratase compare
Psyr_4309 -0.7 -3.4 hypothetical protein compare
Psyr_2456 -0.7 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_3450 -0.7 -3.0 Hpt compare
Psyr_1094 -0.7 -1.8 cold-shock DNA-binding protein family compare
Psyr_3282 -0.7 -3.3 transcriptional regulator, TetR family compare
Psyr_4622 -0.7 -2.4 Nucleotidyl transferase compare
Psyr_4089 -0.7 -3.1 PAS compare
Psyr_0132 -0.7 -2.3 conserved hypothetical protein compare
Psyr_4138 -0.7 -1.8 Toluene tolerance compare
Psyr_1410 -0.7 -1.8 Holliday junction DNA helicase RuvB compare
Psyr_3193 -0.7 -1.9 Transcription factor jumonji, jmjC compare
Psyr_3552 -0.7 -2.1 Divalent cation transporter compare
Psyr_0377 -0.7 -3.3 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_4001 -0.7 -1.1 conserved domain protein compare
Psyr_1962 -0.7 -4.4 TonB-dependent siderophore receptor compare
Psyr_4380 -0.7 -1.2 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_0385 -0.7 -1.3 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3672 -0.7 -1.4 cobalamin-5'-phosphate synthase compare
Psyr_3054 -0.7 -2.4 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase compare
Psyr_1859 -0.7 -2.1 conserved hypothetical protein compare
Psyr_1670 -0.7 -2.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_0793 -0.7 -3.0 conserved hypothetical protein compare
Psyr_2256 -0.7 -1.4 ABC transporter compare
Psyr_3644 -0.7 -1.7 prephenate dehydrogenase compare
Psyr_3008 -0.7 -2.9 Undecaprenyl-diphosphatase compare
Psyr_0378 -0.7 -4.3 Glycosyl transferase, family 2 compare
Psyr_1667 -0.7 -2.4 Colicin V production protein compare
Psyr_1839 -0.7 -2.1 Benzoate membrane transport protein compare
Psyr_2462 -0.7 -2.9 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0983 -0.7 -3.3 Protein of unknown function DUF159 compare
Psyr_4414 -0.7 -2.7 precorrin-3 methyltransferase compare
Psyr_2897 -0.6 -2.4 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0575 -0.6 -1.5 protease FtsH subunit HflC compare
Psyr_3837 -0.6 -1.3 conserved hypothetical protein compare
Psyr_3692 -0.6 -1.0 conserved hypothetical protein compare
Psyr_0372 -0.6 -1.5 CDS compare
Psyr_4161 -0.6 -1.8 Rod shape-determining protein MreD compare
Psyr_4455 -0.6 -2.1 conserved hypothetical protein compare
Psyr_2543 -0.6 -1.1 conserved hypothetical protein compare
Psyr_4786 -0.6 -1.1 hypothetical protein compare
Psyr_0834 -0.6 -2.0 Glutamyl-tRNA synthetase, class Ic compare
Psyr_4580 -0.6 -2.0 anthranilate phosphoribosyltransferase compare
Psyr_0580 -0.6 -1.4 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_0531 -0.6 -1.6 LmbE-like protein compare
Psyr_2990 -0.6 -1.0 conserved hypothetical protein compare
Psyr_3967 -0.6 -1.6 membrane protein TctB, putative compare
Psyr_2612 -0.6 -1.5 syrP protein, putative compare
Psyr_1589 -0.6 -2.1 conserved hypothetical protein compare
Psyr_3695 -0.6 -4.0 RelA/SpoT protein compare
Psyr_1002 -0.6 -1.9 nucleoside ABC transporter ATP-binding protein compare
Psyr_3694 -0.6 -2.6 MazG, bacterial compare
Psyr_2245 -0.6 -1.3 conserved domain protein compare
Psyr_4808 -0.6 -1.2 conserved hypothetical protein compare
Psyr_5065 -0.6 -3.2 ATP-dependent DNA helicase UvrD compare
Psyr_2092 -0.6 -1.8 Protein of unknown function 1935 compare
Psyr_2743 -0.6 -1.8 Lysine exporter protein (LYSE/YGGA) compare
Psyr_2118 -0.6 -1.4 protein of unknown function DUF883 compare
Psyr_2855 -0.6 -1.9 methionine synthase (B12-independent) compare
Psyr_1511 -0.6 -2.0 type II secretion system protein E compare
Psyr_2733 -0.6 -1.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_2508 -0.6 -1.7 transcriptional regulator, IclR family compare
Psyr_0914 -0.6 -3.8 Glycosyl transferase, group 1 compare
Psyr_1563 -0.6 -2.5 Ribonuclease D compare
Psyr_1969 -0.6 -2.6 ABC transporter:Protein of unknown function DUF214 compare
Psyr_2259 -0.6 -1.8 Beta-lactamase-like protein compare
Psyr_3519 -0.6 -2.1 hypothetical protein compare
Psyr_2422 -0.6 -1.6 transcriptional regulator, LysR family compare
Psyr_1765 -0.6 -2.1 GCN5-related N-acetyltransferase compare
Psyr_0976 -0.6 -2.0 Malate:quinone-oxidoreductase compare
Psyr_2804 -0.6 -1.8 hypothetical protein compare
Psyr_5067 -0.6 -2.5 conserved hypothetical protein compare
Psyr_4009 -0.6 -2.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2781 -0.6 -1.2 hypothetical protein compare
Psyr_4908 -0.6 -2.2 conserved hypothetical protein compare
Psyr_3208 -0.6 -1.3 NADH dehydrogenase subunit M compare
Psyr_2420 -0.6 -2.3 conserved hypothetical protein compare
Psyr_0347 -0.6 -2.1 hypothetical protein compare
Psyr_1447 -0.6 -0.9 conserved hypothetical protein compare
Psyr_3418 -0.6 -1.8 PilT protein, N-terminal compare
Psyr_2344 -0.6 -1.8 CDS compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Curcumin across organisms