Experiment set8S532 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Rifampicin 0.25 mM

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS08065 +2.4 2.0 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS04620 +2.2 3.5 homocitrate synthase family protein compare
MMJJ_RS01785 +2.1 1.9 50S ribosomal protein L14e compare
MMJJ_RS05160 +2.1 2.6 RNA-binding protein compare
MMJJ_RS00440 +2.0 6.4 selenide, water dikinase SelD compare
MMJJ_RS03725 +1.8 1.9 sulfurtransferase TusA family protein compare
MMJJ_RS06945 +1.7 7.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS04005 +1.7 6.7 acetate--CoA ligase family protein compare
MMJJ_RS07405 +1.7 2.0 histone family protein compare
MMJJ_RS07650 +1.6 9.8 formate/nitrite transporter family protein compare
MMJJ_RS00665 +1.6 6.9 lysine 2,3-aminomutase compare
MMJJ_RS00660 +1.5 6.8 putative beta-lysine N-acetyltransferase compare
MMJJ_RS01210 +1.4 2.0 hypothetical protein compare
MMJJ_RS03605 +1.4 3.1 TIGR00297 family protein compare
MMJJ_RS07635 +1.4 7.0 response regulator transcription factor compare
MMJJ_RS07455 +1.3 3.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS04195 +1.3 4.7 XTP/dITP diphosphatase compare
MMJJ_RS01915 +1.3 4.7 precorrin-6A reductase compare
MMJJ_RS05280 +1.3 0.7 hypothetical protein compare
MMJJ_RS07640 +1.3 10.4 cache domain-containing protein compare
MMJJ_RS05115 +1.3 2.0 P-II family nitrogen regulator compare
MMJJ_RS06950 +1.3 4.0 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06675 +1.1 4.6 TIGR01212 family radical SAM protein compare
MMJJ_RS06050 +1.1 3.7 molybdopterin molybdotransferase MoeA compare
MMJJ_RS03410 +1.1 2.1 hypothetical protein compare
MMJJ_RS06505 +1.1 1.7 prephenate dehydratase compare
MMJJ_RS02190 +1.1 6.0 molybdopterin biosynthesis protein compare
MMJJ_RS04660 +1.1 4.0 hypoxanthine/guanine phosphoribosyltransferase compare
MMJJ_RS06730 +1.1 3.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS06800 +1.1 2.0 prefoldin subunit alpha compare
MMJJ_RS00500 +1.0 1.4 GNAT family N-acetyltransferase compare
MMJJ_RS01090 +1.0 2.5 hypothetical protein compare
MMJJ_RS08580 +1.0 1.8 YkgJ family cysteine cluster protein compare
MMJJ_RS05250 +1.0 2.8 HDIG domain-containing protein compare
MMJJ_RS01855 +1.0 4.1 MBL fold metallo-hydrolase compare
MMJJ_RS01770 +1.0 1.6 TOBE domain-containing protein compare
MMJJ_RS06575 +1.0 1.5 prephenate dehydrogenase compare
MMJJ_RS05530 +1.0 2.0 roadblock/LC7 domain-containing protein compare
MMJJ_RS05685 +1.0 3.0 class III signal peptide-containing protein compare
MMJJ_RS00305 +1.0 3.4 chemotaxis protein CheC compare
MMJJ_RS06365 +1.0 6.1 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMJJ_RS00900 +0.9 2.6 PC4/YdbC family ssDNA-binding protein compare
MMJJ_RS02890 +0.9 4.1 ATP-binding protein compare
MMJJ_RS08655 +0.9 4.1 phospholipase D-like domain-containing protein compare
MMJJ_RS05510 +0.9 3.2 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS08125 +0.9 3.3 DNA double-strand break repair nuclease NurA compare
MMJJ_RS04290 +0.9 1.9 hypothetical protein compare
MMJJ_RS05915 +0.9 1.5 multiprotein bridging factor aMBF1 compare
MMJJ_RS07970 +0.8 0.8 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS05495 +0.8 3.1 MinD/ParA family protein compare
MMJJ_RS03240 +0.8 0.9 histone family protein compare
MMJJ_RS05400 +0.8 1.7 CoA-binding protein compare
MMJJ_RS02880 +0.8 2.4 hypothetical protein compare
MMJJ_RS07260 +0.8 2.8 PspC domain-containing protein compare
MMJJ_RS07965 +0.8 2.4 hypothetical protein compare
MMJJ_RS04955 +0.8 3.1 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS00745 +0.8 1.7 hypothetical protein compare
MMJJ_RS05740 +0.8 4.1 archaellar assembly protein FlaJ compare
MMJJ_RS08190 +0.8 1.2 hypothetical protein compare
MMJJ_RS07205 +0.8 1.6 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS05225 +0.8 0.6 Gar1/Naf1 family protein compare
MMJJ_RS07810 +0.8 2.3 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS03510 +0.8 2.3 acyl-CoA dehydratase activase compare
MMJJ_RS04055 +0.8 1.1 hypothetical protein compare
MMJJ_RS07235 +0.8 4.2 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS00530 +0.8 2.9 cobalt ECF transporter T component CbiQ compare
MMJJ_RS02345 +0.8 2.6 ATP-binding protein compare
MMJJ_RS06975 +0.8 1.3 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS07170 +0.8 1.9 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS07905 +0.8 2.8 DUF89 domain-containing protein compare
MMJJ_RS01615 +0.8 1.3 MoaD/ThiS family protein compare
MMJJ_RS02115 +0.8 2.7 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS08870 +0.8 0.5 2-isopropylmalate synthase compare
MMJJ_RS02985 +0.8 3.4 MBL fold metallo-hydrolase compare
MMJJ_RS07175 +0.8 4.0 DEAD/DEAH box helicase compare
MMJJ_RS04105 +0.7 3.9 prepilin peptidase compare
MMJJ_RS06090 +0.7 2.0 hypothetical protein compare
MMJJ_RS02275 +0.7 1.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08905 +0.7 2.9 YcaO-related McrA-glycine thioamidation protein compare
MMJJ_RS08150 +0.7 2.7 M24 family metallopeptidase compare
MMJJ_RS04450 +0.7 2.7 diphthamide biosynthesis enzyme Dph2 compare
MMJJ_RS05585 +0.7 2.6 hypothetical protein compare
MMJJ_RS07850 +0.7 3.8 ATP-binding protein compare
MMJJ_RS01375 +0.7 3.3 tetrahydromethanopterin:alpha-L-glutamate ligase compare
MMJJ_RS03515 +0.7 2.4 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS07015 +0.7 0.4 PFL family protein compare
MMJJ_RS01530 +0.7 0.4 YwbE family protein compare
MMJJ_RS02870 +0.7 1.1 hypothetical protein compare
MMJJ_RS00180 +0.7 1.9 DNA topoisomerase I compare
MMJJ_RS08235 +0.7 0.8 UPF0147 family protein compare
MMJJ_RS07775 +0.7 1.6 fluoride efflux transporter CrcB compare
MMJJ_RS03830 +0.7 1.9 CBS domain-containing protein compare
MMJJ_RS06080 +0.7 2.7 serine/threonine protein kinase compare
MMJJ_RS09330 +0.7 1.6 hypothetical protein compare
MMJJ_RS06650 +0.6 2.9 cell division protein FtsZ compare
MMJJ_RS02860 +0.6 0.6 site-specific integrase compare
MMJJ_RS06440 +0.6 2.5 DUF4870 domain-containing protein compare
MMJJ_RS00960 +0.6 2.2 flavodoxin family protein compare
MMJJ_RS08515 +0.6 1.1 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS07240 +0.6 3.8 MBL fold metallo-hydrolase compare
MMJJ_RS05750 +0.6 2.5 flagellar accessory protein FlaH compare
MMJJ_RS05540 +0.6 4.0 LysR family transcriptional regulator compare
MMJJ_RS04175 +0.6 1.6 hypothetical protein compare
MMJJ_RS07910 +0.6 2.5 CBS domain-containing protein compare
MMJJ_RS07445 +0.6 2.4 RlmF-related methyltransferase compare
MMJJ_RS07435 +0.6 3.6 SMC family ATPase compare
MMJJ_RS07610 +0.6 1.1 DUF2119 domain-containing protein compare
MMJJ_RS01395 +0.6 1.2 DUF1894 domain-containing protein compare
MMJJ_RS04325 +0.6 1.6 tyrosine-type recombinase/integrase compare
MMJJ_RS06535 +0.6 2.9 UPF0104 family protein compare
MMJJ_RS07185 +0.6 0.9 DUF371 domain-containing protein compare
MMJJ_RS02845 +0.6 2.4 hypothetical protein compare
MMJJ_RS05745 +0.6 3.0 type II/IV secretion system ATPase subunit compare
MMJJ_RS02120 +0.6 0.8 DJ-1/PfpI family protein compare
MMJJ_RS07255 +0.6 3.3 hypothetical protein compare
MMJJ_RS01505 +0.6 1.1 DUF2124 domain-containing protein compare
MMJJ_RS09250 +0.6 0.9 hypothetical protein compare
MMJJ_RS07875 +0.6 0.6 FAD-dependent oxidoreductase compare
MMJJ_RS09325 +0.6 1.7 hypothetical protein compare
MMJJ_RS07450 +0.6 1.2 hypothetical protein compare
MMJJ_RS00540 +0.6 1.5 hypothetical protein compare
MMJJ_RS06055 +0.6 2.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS02315 +0.6 1.6 magnesium chelatase compare
MMJJ_RS08230 +0.6 0.7 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS04500 +0.6 2.0 hypothetical protein compare
MMJJ_RS03905 +0.6 1.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS02380 +0.6 2.5 hypothetical protein compare
MMJJ_RS04265 +0.5 1.5 FmdE family protein compare
MMJJ_RS08705 +0.5 1.6 AEC family transporter compare
MMJJ_RS07690 +0.5 1.9 glycosyltransferase family 4 protein compare
MMJJ_RS04585 +0.5 1.8 phenylacetate--CoA ligase compare
MMJJ_RS06340 +0.5 0.7 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS03525 +0.5 2.3 2-hydroxyacyl-CoA dehydratase family protein compare
MMJJ_RS07220 +0.5 2.4 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS00505 +0.5 1.7 3'-5' exonuclease compare
MMJJ_RS02310 +0.5 1.7 ABC transporter ATP-binding protein compare
MMJJ_RS06710 +0.5 2.4 TldD/PmbA family protein compare
MMJJ_RS00755 +0.5 1.8 hypothetical protein compare
MMJJ_RS08265 +0.5 2.2 iron ABC transporter permease compare
MMJJ_RS07215 +0.5 2.5 TIGR00341 family protein compare
MMJJ_RS08305 +0.5 1.5 peroxiredoxin compare
MMJJ_RS08630 +0.5 1.2 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS05870 +0.5 1.0 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS04370 +0.5 2.9 SIR2 family protein compare
MMJJ_RS00615 +0.5 0.7 nucleoside deaminase compare
MMJJ_RS08180 +0.5 1.3 ABC transporter ATP-binding protein compare
MMJJ_RS07210 +0.5 2.1 AmmeMemoRadiSam system protein B compare
MMJJ_RS06865 +0.5 0.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS09360 +0.5 1.7 hypothetical protein compare
MMJJ_RS08730 +0.5 2.3 glycosyltransferase family 4 protein compare
MMJJ_RS04935 +0.5 0.8 4Fe-4S binding protein compare
MMJJ_RS04610 +0.5 1.0 ribosome assembly RNA-binding protein YhbY compare
MMJJ_RS02145 +0.5 1.9 class I SAM-dependent methyltransferase compare
MMJJ_RS04275 +0.5 1.2 ABC transporter ATP-binding protein compare
MMJJ_RS08835 +0.5 2.2 signal peptide peptidase SppA compare
MMJJ_RS05975 +0.5 1.8 sulfurtransferase TusA family protein compare
MMJJ_RS05420 +0.5 0.6 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS03540 +0.5 1.1 TIGR00289 family protein compare
MMJJ_RS03625 +0.5 2.0 DUF63 family protein compare
MMJJ_RS06625 +0.5 0.2 pyruvate synthase subunit PorB compare
MMJJ_RS06205 +0.5 1.7 EamA family transporter compare
MMJJ_RS04815 +0.5 1.0 TIM barrel protein compare
MMJJ_RS02265 +0.5 1.8 hypothetical protein compare
MMJJ_RS08365 +0.5 1.1 DsrE family protein compare
MMJJ_RS01745 +0.5 0.9 metal-dependent transcriptional regulator compare
MMJJ_RS06640 +0.5 1.4 YfcE family phosphodiesterase compare
MMJJ_RS08865 +0.5 1.2 class IV adenylate cyclase compare
MMJJ_RS08925 +0.5 1.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06395 +0.4 2.3 sugar phosphate isomerase/epimerase compare
MMJJ_RS09125 +0.4 1.7 CBS domain-containing protein compare
MMJJ_RS01270 +0.4 1.6 4Fe-4S binding protein compare
MMJJ_RS07800 +0.4 2.2 AMP-binding protein compare
MMJJ_RS05690 +0.4 3.0 hypothetical protein compare
MMJJ_RS01260 +0.4 1.7 hypothetical protein compare
MMJJ_RS02355 +0.4 1.9 DUF2798 domain-containing protein compare
MMJJ_RS01980 +0.4 1.9 cation:proton antiporter compare
MMJJ_RS08525 +0.4 1.2 peptidylprolyl isomerase compare
MMJJ_RS07480 +0.4 2.1 FAD-dependent oxidoreductase compare
MMJJ_RS00445 +0.4 0.7 class III signal peptide-containing protein compare
MMJJ_RS02195 +0.4 1.8 AmmeMemoRadiSam system radical SAM enzyme compare
MMJJ_RS03545 +0.4 1.4 flagella protein F compare
MMJJ_RS09390 +0.4 1.1 hypothetical protein compare
MMJJ_RS06450 +0.4 1.6 DUF3343 domain-containing protein compare
MMJJ_RS05505 +0.4 3.1 hypothetical protein compare
MMJJ_RS04240 +0.4 2.0 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS04115 +0.4 1.6 HDIG domain-containing protein compare
MMJJ_RS08295 +0.4 2.2 iron ABC transporter substrate-binding protein compare
MMJJ_RS04830 +0.4 1.2 zinc dependent phospholipase C family protein compare
MMJJ_RS08015 +0.4 1.5 HAD family hydrolase compare
MMJJ_RS03300 +0.4 1.5 RNA ligase compare
MMJJ_RS04245 +0.4 1.1 flavoprotein compare
MMJJ_RS03600 +0.4 1.4 TrmJ/YjtD family RNA methyltransferase compare
MMJJ_RS07025 +0.4 1.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS04135 +0.4 0.7 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS09225 +0.4 0.9 hypothetical protein compare
MMJJ_RS04390 +0.4 1.5 rhomboid family intramembrane serine protease compare
MMJJ_RS04070 +0.4 2.5 DUF2341 domain-containing protein compare
MMJJ_RS09355 +0.4 0.7 hypothetical protein compare
MMJJ_RS04840 +0.4 2.3 iron ABC transporter permease compare
MMJJ_RS02285 +0.4 0.5 class III signal peptide-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Rifampicin across organisms