Experiment set8IT052 for Klebsiella michiganensis M5al

Compare to:

Dilute LB (1/10)

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS19495 +0.8 1.9 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS04240 +0.8 1.4 thr operon leader peptide compare
BWI76_RS21200 +0.7 3.3 aldose epimerase compare
BWI76_RS19850 +0.7 2.7 tRNA-Pro compare
BWI76_RS04970 +0.7 2.2 ABC transporter permease compare
BWI76_RS27875 +0.7 0.7 membrane protein compare
BWI76_RS20695 +0.7 1.5 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS07955 +0.7 1.3 nucleoside diphosphate kinase regulator compare
BWI76_RS07780 +0.7 1.5 hypothetical protein compare
BWI76_RS11365 +0.7 1.1 iron ABC transporter compare
BWI76_RS25545 +0.7 3.5 hypothetical protein compare
BWI76_RS11835 +0.6 1.6 putative regulatory protein MarR compare
BWI76_RS02090 +0.6 2.5 membrane protein compare
BWI76_RS11980 +0.6 1.6 DeoR family transcriptional regulator compare
BWI76_RS23895 +0.6 1.8 Xaa-Pro aminopeptidase compare
BWI76_RS00715 +0.6 2.1 two-component sensor histidine kinase compare
BWI76_RS17970 +0.6 2.4 zinc metalloprotease HtpX compare
BWI76_RS10820 +0.6 2.2 iron uptake system protein EfeO compare
BWI76_RS25915 +0.6 1.9 protein SlyX compare
BWI76_RS16425 +0.6 1.8 hypothetical protein compare
BWI76_RS04605 +0.6 1.4 thiamine ABC transporter ATP-binding protein compare
BWI76_RS13450 +0.6 1.7 acyl-CoA thioesterase compare
BWI76_RS23535 +0.6 2.4 hypothetical protein compare
BWI76_RS20435 +0.6 0.9 chorismate synthase compare
BWI76_RS26285 +0.6 2.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS05075 +0.6 0.9 type II secretion system protein GspG compare
BWI76_RS18605 +0.6 1.6 oxidoreductase molybdopterin-binding protein compare
BWI76_RS27605 +0.6 0.8 hypothetical protein compare
BWI76_RS26330 +0.6 2.1 ABC transporter ATP-binding protein compare
BWI76_RS18070 +0.5 2.4 DNA polymerase III subunit epsilon compare
BWI76_RS22235 +0.5 1.8 transcriptional regulator GutM compare
BWI76_RS23200 +0.5 1.6 propionate kinase compare
BWI76_RS25380 +0.5 2.0 oxaloacetate decarboxylase subunit beta compare
BWI76_RS11610 +0.5 2.1 glutamate dehydrogenase compare
BWI76_RS18090 +0.5 2.2 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS24350 +0.5 2.5 quinol monooxygenase compare
BWI76_RS16470 +0.5 1.3 transcriptional repressor NemR compare
BWI76_RS00240 +0.5 1.4 FMN-binding protein MioC compare
BWI76_RS27905 +0.5 1.4 heat-shock protein IbpB compare
BWI76_RS16455 +0.5 1.4 superoxide dismutase compare
BWI76_RS14015 +0.5 1.6 L-2,4-diaminobutyrate decarboxylase compare
BWI76_RS11820 +0.5 1.2 short-chain dehydrogenase/reductase SDR compare
BWI76_RS02745 +0.5 1.1 hypothetical protein compare
BWI76_RS20440 +0.5 1.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS23050 +0.5 1.3 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS24575 +0.5 1.2 hypothetical protein compare
BWI76_RS14435 +0.5 1.5 glutamine ABC transporter ATP-binding protein compare
BWI76_RS07255 +0.5 2.3 hypothetical protein compare
BWI76_RS18175 +0.5 1.9 hydrolase compare
BWI76_RS12985 +0.5 1.4 transcriptional regulator compare
BWI76_RS08585 +0.5 1.2 nicotinamide riboside transporter PnuC compare
BWI76_RS08380 +0.5 1.0 endonuclease VIII compare
BWI76_RS14170 +0.5 2.0 hypothetical protein compare
BWI76_RS09025 +0.5 1.0 GntR family transcriptional regulator compare
BWI76_RS05885 +0.5 1.8 anion permease compare
BWI76_RS21375 +0.5 1.0 autonomous glycyl radical cofactor GrcA compare
BWI76_RS12125 +0.5 0.9 hypothetical protein compare
BWI76_RS01700 +0.5 2.7 dipeptidase E compare
BWI76_RS00480 +0.5 2.3 hypothetical protein compare
BWI76_RS09690 +0.5 0.9 dimethyl sulfoxide reductase compare
BWI76_RS11895 +0.5 2.0 AraC family transcriptional regulator compare
BWI76_RS02690 +0.5 1.6 hypothetical protein compare
BWI76_RS15440 +0.5 2.3 hypothetical protein compare
BWI76_RS01545 +0.5 1.0 thiamine biosynthesis protein ThiS compare
BWI76_RS22960 +0.5 1.0 YgdI/YgdR family lipoprotein compare
BWI76_RS23190 +0.5 2.7 propanediol utilization protein PduU compare
BWI76_RS12450 +0.5 1.4 phage shock protein PspA compare
BWI76_RS09475 +0.5 2.4 putrescine ABC transporter permease PotI compare
BWI76_RS02180 +0.5 1.2 hypothetical protein compare
BWI76_RS23005 +0.5 1.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS05950 +0.5 1.3 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS10835 +0.5 1.3 hypothetical protein compare
BWI76_RS16090 +0.5 1.6 two-component system response regulator DcuR compare
BWI76_RS17200 +0.5 1.2 hypothetical protein compare
BWI76_RS08750 +0.5 1.0 kinase inhibitor compare
BWI76_RS00075 +0.5 1.0 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS02855 +0.5 2.0 cytochrome B562 compare
BWI76_RS04055 +0.5 4.1 GGDEF domain-containing protein compare
BWI76_RS06435 +0.5 1.5 MFS transporter compare
BWI76_RS10055 +0.5 1.1 AraC family transcriptional regulator compare
BWI76_RS10060 +0.4 1.2 acylphosphatase compare
BWI76_RS19980 +0.4 1.9 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS18270 +0.4 1.7 hypothetical protein compare
BWI76_RS27620 +0.4 1.6 hypothetical protein compare
BWI76_RS14575 +0.4 1.9 TENA/THI-4 family protein compare
BWI76_RS13660 +0.4 1.5 nitrate reductase subunit beta compare
BWI76_RS15960 +0.4 1.4 LysR family transcriptional regulator compare
BWI76_RS07185 +0.4 1.1 hypothetical protein compare
BWI76_RS23530 +0.4 1.4 MarR family transcriptional regulator compare
BWI76_RS23335 +0.4 1.4 GNAT family acetyltransferase compare
BWI76_RS17765 +0.4 1.5 hypothetical protein compare
BWI76_RS15365 +0.4 2.7 hypothetical protein compare
BWI76_RS09730 +0.4 0.8 pyruvate formate lyase 1-activating protein compare
BWI76_RS07475 +0.4 0.8 DNA-binding transcriptional regulator RamA compare
BWI76_RS20330 +0.4 1.7 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS20510 +0.4 2.8 glucokinase compare
BWI76_RS19115 +0.4 2.1 outer membrane assembly protein AsmA compare
BWI76_RS26525 +0.4 2.5 nickel-responsive transcriptional regulator NikR compare
BWI76_RS02200 +0.4 1.9 phosphonate C-P lyase system protein PhnL compare
BWI76_RS20325 +0.4 2.6 histidine/lysine/arginine/ornithine ABC transporter permease HisM compare
BWI76_RS11125 +0.4 1.1 metal-dependent hydrolase compare
BWI76_RS12555 +0.4 1.2 hypothetical protein compare
BWI76_RS04515 +0.4 0.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS15305 +0.4 1.8 O-acetylserine/cysteine exporter compare
BWI76_RS02230 +0.4 2.9 phosphonate metabolism transcriptional regulator PhnF compare
BWI76_RS01195 +0.4 0.9 membrane protein compare
BWI76_RS11935 +0.4 1.8 YmiA family putative membrane protein compare
BWI76_RS16505 +0.4 1.8 MFS transporter compare
BWI76_RS12465 +0.4 0.9 phage shock protein D compare
BWI76_RS24965 +0.4 1.0 SCP2 domain-containing protein compare
BWI76_RS19520 +0.4 2.2 acetyltransferase GCN5 compare
BWI76_RS13160 +0.4 1.4 azoreductase compare
BWI76_RS15120 +0.4 2.1 hypothetical protein compare
BWI76_RS07730 +0.4 0.9 iron-enterobactin transporter membrane protein compare
BWI76_RS17370 +0.4 0.7 nitrate transporter NasD compare
BWI76_RS18370 +0.4 2.7 alpha-amylase compare
BWI76_RS24770 +0.4 1.0 hypothetical protein compare
BWI76_RS25035 +0.4 2.0 malonate transporter subunit MadM compare
BWI76_RS20155 +0.4 1.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS07855 +0.4 0.9 PucR family transcriptional regulator compare
BWI76_RS19500 +0.4 2.2 osmoprotectant uptake system permease compare
BWI76_RS01720 +0.4 2.3 L-sorbose 1-phosphate reductase (EC 1.1.1.-) (from data) compare
BWI76_RS16785 +0.4 1.4 peptidase M20 compare
BWI76_RS18410 +0.4 1.2 drug/metabolite exporter YedA compare
BWI76_RS22895 +0.4 1.3 FAD-dependent oxidoreductase compare
BWI76_RS01005 +0.4 2.1 CarD family transcriptional regulator compare
BWI76_RS22475 +0.4 1.1 heme ABC transporter ATP-binding protein compare
BWI76_RS05655 +0.4 1.4 hypothetical protein compare
BWI76_RS07595 +0.4 1.5 putative oxidoreductase compare
BWI76_RS04860 +0.4 2.5 alpha-N-arabinofuranosidase compare
BWI76_RS06130 +0.4 1.1 extensin family protein compare
BWI76_RS27795 +0.4 2.1 two-component system sensor histidine kinase UhpB compare
BWI76_RS22040 +0.4 1.6 carboxymuconolactone decarboxylase family protein compare
BWI76_RS25375 +0.4 1.5 hypothetical protein compare
BWI76_RS27855 +0.4 1.6 D-serine transporter DsdX compare
BWI76_RS11345 +0.4 2.3 LysR family transcriptional regulator compare
BWI76_RS10385 +0.4 2.0 MmgE/PrpD family protein compare
BWI76_RS13625 +0.4 2.0 hypothetical protein compare
BWI76_RS12495 +0.4 1.1 2-Cys peroxiredoxin compare
BWI76_RS11255 +0.4 0.6 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS20375 +0.4 0.5 membrane protein compare
BWI76_RS00380 +0.4 2.4 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS19890 +0.4 1.3 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS26890 +0.4 0.6 hypothetical protein compare
BWI76_RS11675 +0.4 1.3 arginine N-succinyltransferase compare
BWI76_RS22520 +0.4 2.3 3-oxoacyl-ACP synthase compare
BWI76_RS26250 +0.4 1.9 quercetin 2,3-dioxygenase compare
BWI76_RS11845 +0.4 1.4 tryptophan synthase subunit beta compare
BWI76_RS21490 +0.4 3.2 GGDEF domain-containing protein compare
BWI76_RS16190 +0.4 1.8 universal stress protein UspE compare
BWI76_RS04850 +0.4 2.3 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS13970 +0.4 1.1 ABC transporter compare
BWI76_RS13470 +0.4 1.5 transporter compare
BWI76_RS01755 +0.4 1.9 23S rRNA pseudouridine synthase F compare
BWI76_RS03665 +0.4 0.6 ABC transporter ATP-binding protein compare
BWI76_RS13715 +0.4 1.7 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS22620 +0.4 1.6 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS02850 +0.4 2.3 metalloprotease PmbA compare
BWI76_RS09725 +0.4 1.3 MurR/RpiR family transcriptional regulator compare
BWI76_RS19610 +0.4 2.2 Cytidine deaminase (EC 3.5.4.5) (from data) compare
BWI76_RS20725 +0.4 2.1 GNAT family acetyltransferase compare
BWI76_RS17100 +0.4 1.9 glutathione peroxidase compare
BWI76_RS12665 +0.4 1.4 hypothetical protein compare
BWI76_RS13040 +0.4 1.2 transcriptional regulator compare
BWI76_RS13895 +0.4 1.3 LysR family transcriptional regulator compare
BWI76_RS23735 +0.4 1.4 sugar diacid utilization regulator compare
BWI76_RS26355 +0.4 1.9 hypothetical protein compare
BWI76_RS20335 +0.4 2.0 zinc transporter compare
BWI76_RS26750 +0.4 1.7 PfkB domain-containing protein compare
BWI76_RS26235 +0.4 1.4 gluconate transporter compare
BWI76_RS00415 +0.4 1.2 glucose-1-phosphatase compare
BWI76_RS08825 +0.4 1.6 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS21345 +0.4 1.2 sigma-E factor regulatory protein RseB compare
BWI76_RS27745 +0.4 1.2 PTS sugar transporter subunit IIB compare
BWI76_RS09550 +0.3 1.9 low-specificity L-threonine aldolase compare
BWI76_RS08330 +0.3 0.8 hypothetical protein compare
BWI76_RS21495 +0.3 2.0 outer membrane lipoprotein compare
BWI76_RS02725 +0.3 0.6 HxlR family transcriptional regulator compare
BWI76_RS20890 +0.3 2.2 neutral zinc metallopeptidase compare
BWI76_RS24525 +0.3 1.2 urease accessory protein UreG compare
BWI76_RS21480 +0.3 2.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS26515 +0.3 1.6 nickel import ATP-binding protein NikD compare
BWI76_RS02655 +0.3 1.0 hypothetical protein compare
BWI76_RS11840 +0.3 0.8 tryptophan synthase subunit alpha compare
BWI76_RS00375 +0.3 0.9 hypothetical protein compare
BWI76_RS05570 +0.3 0.7 hypothetical protein compare
BWI76_RS16815 +0.3 0.8 periplasmic binding protein compare
BWI76_RS08985 +0.3 1.2 threonine/homoserine exporter RhtA compare
BWI76_RS00285 +0.3 1.3 D-ribose ABC transporter substrate-binding protein compare
BWI76_RS01655 +0.3 1.8 homoserine O-succinyltransferase compare
BWI76_RS02880 +0.3 0.9 membrane protein compare
BWI76_RS04895 +0.3 1.8 hypothetical protein compare
BWI76_RS01905 +0.3 1.6 envelope stress response protein PspG compare
BWI76_RS22815 +0.3 2.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS01715 +0.3 2.1 shikimate 5-dehydrogenase compare
BWI76_RS04900 +0.3 2.2 DUF2950 domain-containing protein compare
BWI76_RS25465 +0.3 2.5 transcriptional regulator compare
BWI76_RS15975 +0.3 0.6 hypothetical protein compare
BWI76_RS16260 +0.3 1.0 two-component sensor histidine kinase compare
BWI76_RS07345 +0.3 1.8 family 3 extracellular solute-binding protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in lb dilute experiments