Experiment set7S384 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_02591 -5.6 -3.8 DNA-binding protein H-NS compare
MPMX20_04489 -5.5 -21.3 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01334 -5.4 -8.3 Phosphoglucomutase compare
MPMX20_03019 -5.3 -16.0 hypothetical protein compare
MPMX20_03020 -4.9 -12.9 hypothetical protein compare
MPMX20_00105 -4.9 -23.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00109 -4.7 -29.3 hypothetical protein compare
MPMX20_03018 -4.7 -5.6 hypothetical protein compare
MPMX20_00110 -4.5 -25.0 hypothetical protein compare
MPMX20_00108 -4.3 -26.7 hypothetical protein compare
MPMX20_03021 -4.2 -9.4 hypothetical protein compare
MPMX20_01368 -4.2 -2.9 hypothetical protein compare
MPMX20_01950 -4.2 -2.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01813 -4.2 -9.4 hypothetical protein compare
MPMX20_03017 -4.1 -12.2 hypothetical protein compare
MPMX20_03015 -4.1 -28.7 Phosphoglucosamine mutase compare
MPMX20_04768 -4.0 -2.8 hypothetical protein compare
MPMX20_03986 -4.0 -3.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00453 -4.0 -3.8 RNA-binding protein Hfq compare
MPMX20_04443 -3.8 -3.7 Sec-independent protein translocase protein TatB compare
MPMX20_03016 -3.8 -23.1 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04483 -3.8 -2.6 Lipid III flippase compare
MPMX20_00106 -3.8 -4.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03390 -3.8 -8.0 Outer membrane protein assembly factor BamB compare
MPMX20_03153 -3.8 -2.4 hypothetical protein compare
MPMX20_01370 -3.7 -2.6 Peptidoglycan-associated lipoprotein compare
MPMX20_01354 -3.7 -3.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02696 -3.6 -9.3 Murein tetrapeptide carboxypeptidase compare
MPMX20_01369 -3.6 -2.5 Tol-Pal system protein TolB compare
MPMX20_00102 -3.5 -2.4 hypothetical protein compare
MPMX20_04440 -3.4 -2.3 Transcription antitermination protein RfaH compare
MPMX20_04530 -3.4 -10.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03010 -3.4 -2.3 UDP-glucose 4-epimerase compare
MPMX20_00388 -3.4 -1.3 hypothetical protein compare
MPMX20_01366 -3.3 -2.3 Tol-Pal system protein TolQ compare
MPMX20_02737 -3.2 -18.3 Tail-specific protease compare
MPMX20_03408 -3.2 -2.2 Co-chaperone protein HscB compare
MPMX20_04601 -3.2 -2.2 DNA polymerase I compare
MPMX20_03154 -3.2 -8.3 Inner membrane protein YejM compare
MPMX20_03022 -3.2 -2.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02997 -3.2 -7.9 Exodeoxyribonuclease I compare
MPMX20_01367 -3.1 -3.7 Tol-Pal system protein TolR compare
MPMX20_04730 -3.1 -7.2 hypothetical protein compare
MPMX20_01355 -3.1 -1.2 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03490 -3.1 -6.1 SsrA-binding protein compare
MPMX20_00441 -3.0 -1.6 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04375 -2.9 -9.1 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00745 -2.9 -4.4 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02020 -2.9 -12.7 Mannose-6-phosphate isomerase compare
MPMX20_01020 -2.9 -1.6 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_01607 -2.8 -5.3 Outer membrane protein A compare
MPMX20_02768 -2.7 -2.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00241 -2.7 -10.8 Glucose-6-phosphate isomerase compare
MPMX20_02672 -2.7 -13.3 hypothetical protein compare
MPMX20_03209 -2.6 -3.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_00747 -2.6 -6.6 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01552 -2.6 -2.5 hypothetical protein compare
MPMX20_02879 -2.6 -6.5 hypothetical protein compare
MPMX20_01570 -2.5 -1.7 Integration host factor subunit beta compare
MPMX20_00998 -2.5 -3.2 Sec translocon accessory complex subunit YajC compare
MPMX20_02766 -2.5 -3.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02701 -2.5 -1.7 Fatty acid metabolism regulator protein compare
MPMX20_04442 -2.4 -5.5 Sec-independent protein translocase protein TatC compare
MPMX20_01352 -2.4 -8.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02767 -2.4 -3.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00570 -2.4 -13.9 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04463 -2.3 -7.0 DNA helicase II compare
MPMX20_04275 -2.3 -2.7 Ribulose-phosphate 3-epimerase compare
MPMX20_00258 -2.3 -5.0 Diacylglycerol kinase compare
MPMX20_04133 -2.3 -6.7 Stringent starvation protein A compare
MPMX20_03683 -2.3 -1.6 RecBCD enzyme subunit RecB compare
MPMX20_04279 -2.3 -3.1 Shikimate kinase 1 compare
MPMX20_04465 -2.3 -5.1 Tyrosine recombinase XerC compare
MPMX20_04119 -2.2 -1.5 DNA polymerase III subunit chi compare
MPMX20_04377 -2.2 -10.9 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01118 -2.2 -1.0 hypothetical protein compare
MPMX20_01350 -2.2 -4.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_00825 -2.2 -1.5 Aspartate 1-decarboxylase compare
MPMX20_03210 -2.2 -4.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_04650 -2.2 -4.0 tRNA modification GTPase MnmE compare
MPMX20_04137 -2.1 -4.8 Inner membrane protein YhcB compare
MPMX20_04140 -2.1 -6.8 Malate dehydrogenase compare
MPMX20_02885 -2.1 -9.6 hypothetical protein compare
MPMX20_04197 -2.0 -3.8 Trk system potassium uptake protein TrkA compare
MPMX20_03627 -2.0 -8.0 RNA polymerase sigma factor RpoS compare
MPMX20_04626 -2.0 -4.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00111 -2.0 -8.5 hypothetical protein compare
MPMX20_00831 -2.0 -5.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_02475 -2.0 -3.0 Putrescine export system permease protein SapB compare
MPMX20_03685 -1.9 -3.3 RecBCD enzyme subunit RecC compare
MPMX20_02635 -1.9 -2.2 Release factor glutamine methyltransferase compare
MPMX20_01901 -1.9 -1.3 Integration host factor subunit alpha compare
MPMX20_01616 -1.9 -1.4 Heat shock protein HspQ compare
MPMX20_04731 -1.9 -4.3 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04374 -1.8 -2.4 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02769 -1.8 -2.4 putative transcriptional regulatory protein YebC compare
MPMX20_01005 -1.8 -3.3 Transcriptional repressor NrdR compare
MPMX20_00807 -1.8 -2.1 Pyruvate dehydrogenase E1 component compare
MPMX20_03213 -1.8 -6.8 NADH-quinone oxidoreductase subunit G compare
MPMX20_02477 -1.8 -3.3 Peptide transport system ATP-binding protein SapD compare
MPMX20_03409 -1.8 -2.0 Iron-binding protein IscA compare
MPMX20_03290 -1.8 -1.6 tRNA-Ala compare
MPMX20_03396 -1.7 -5.0 Nucleoside diphosphate kinase compare
MPMX20_04067 -1.7 -5.8 Lipoprotein NlpI compare
MPMX20_00514 -1.7 -5.0 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01356 -1.7 -6.5 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03214 -1.7 -6.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_04038 -1.7 -5.8 Glucitol operon repressor compare
MPMX20_03407 -1.7 -2.5 Chaperone protein HscA compare
MPMX20_02646 -1.7 -2.2 hypothetical protein compare
MPMX20_03385 -1.7 -5.7 hypothetical protein compare
MPMX20_03753 -1.7 -5.1 Tyrosine recombinase XerD compare
MPMX20_00452 -1.6 -7.5 tRNA dimethylallyltransferase compare
MPMX20_00419 -1.6 -6.7 Aspartate ammonia-lyase compare
MPMX20_03216 -1.6 -7.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03629 -1.6 -3.6 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03382 -1.6 -1.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04595 -1.6 -1.5 Glutamine synthetase compare
MPMX20_04170 -1.6 -2.7 DNA-binding protein Fis compare
MPMX20_02892 -1.5 -9.1 hypothetical protein compare
MPMX20_04614 -1.5 -6.9 Ribose operon repressor compare
MPMX20_01019 -1.5 -4.2 Protoheme IX farnesyltransferase compare
MPMX20_04444 -1.5 -1.5 Sec-independent protein translocase protein TatA compare
MPMX20_02657 -1.5 -11.7 hypothetical protein compare
MPMX20_00728 -1.5 -1.3 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00721 -1.4 -1.6 Chaperone protein DnaJ compare
MPMX20_03264 -1.4 -3.6 Chorismate synthase compare
MPMX20_03206 -1.4 -5.4 NADH-quinone oxidoreductase subunit N compare
MPMX20_01156 -1.4 -3.1 hypothetical protein compare
MPMX20_03443 -1.4 -3.2 Anti-sigma-E factor RseA compare
MPMX20_00107 -1.4 -3.3 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_00262 -1.4 -2.6 Zinc uptake regulation protein compare
MPMX20_01365 -1.4 -2.2 Acyl-CoA thioester hydrolase YbgC compare
MPMX20_01357 -1.4 -4.2 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01353 -1.4 -3.9 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01029 -1.4 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03215 -1.4 -2.7 NADH-quinone oxidoreductase subunit E compare
MPMX20_03308 -1.4 -4.5 Cysteine synthase A compare
MPMX20_01975 -1.4 -9.1 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_01869 -1.3 -5.7 Succinylglutamate desuccinylase compare
MPMX20_03207 -1.3 -4.3 NADH-quinone oxidoreductase subunit M compare
MPMX20_02884 -1.3 -7.6 hypothetical protein compare
MPMX20_04276 -1.3 -4.0 DNA adenine methylase compare
MPMX20_00899 -1.3 -1.3 Ribonuclease HI compare
MPMX20_04100 -1.3 -4.2 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX20_03440 -1.3 -3.3 Elongation factor 4 compare
MPMX20_03174 -1.3 -3.5 FAD:protein FMN transferase compare
MPMX20_02890 -1.3 -7.3 hypothetical protein compare
MPMX20_04628 -1.3 -1.8 ATP synthase protein I compare
MPMX20_03882 -1.3 -5.8 Outer membrane protein TolC compare
MPMX20_04552 -1.3 -4.0 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_03047 -1.3 -2.5 dCTP deaminase compare
MPMX20_03013 -1.3 -4.2 dTDP-glucose 4,6-dehydratase compare
MPMX20_00673 -1.3 -6.3 Peptide chain release factor RF3 compare
MPMX20_01750 -1.2 -4.9 Negative regulator of flagellin synthesis compare
MPMX20_04427 -1.2 -1.1 5S ribosomal RNA compare
MPMX20_00785 -1.2 -2.6 D-alanine--D-alanine ligase B compare
MPMX20_02882 -1.2 -5.6 hypothetical protein compare
MPMX20_01021 -1.2 -3.0 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_03211 -1.2 -2.9 NADH-quinone oxidoreductase subunit I compare
MPMX20_03580 -1.2 -3.1 Protein RecA compare
MPMX20_02891 -1.2 -7.2 hypothetical protein compare
MPMX20_04504 -1.2 -2.7 hypothetical protein compare
MPMX20_00480 -1.2 -2.3 50S ribosomal protein L9 compare
MPMX20_02645 -1.2 -3.6 Ribosome-binding ATPase YchF compare
MPMX20_03678 -1.2 -1.3 tRNA-Met compare
MPMX20_01967 -1.2 -1.7 hypothetical protein compare
MPMX20_01135 -1.2 -4.5 HTH-type transcriptional regulator BetI compare
MPMX20_04518 -1.1 -4.0 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_02008 -1.1 -4.6 Ion-translocating oxidoreductase complex subunit D compare
MPMX20_04467 -1.1 -3.9 Diaminopimelate epimerase compare
MPMX20_02476 -1.1 -1.5 Putrescine export system permease protein SapC compare
MPMX20_03487 -1.1 -4.0 Outer membrane protein assembly factor BamE compare
MPMX20_04153 -1.1 -3.6 Ribonuclease G compare
MPMX20_04615 -1.1 -4.8 Ribokinase compare
MPMX20_04482 -1.1 -4.9 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_01351 -1.1 -1.7 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04640 -1.1 -2.0 Phosphate transport system permease protein PstC compare
MPMX20_03075 -1.1 -3.3 HTH-type transcriptional repressor NagR compare
MPMX20_04278 -1.1 -2.7 3-dehydroquinate synthase compare
MPMX20_02344 -1.1 -1.2 hypothetical protein compare
MPMX20_02011 -1.1 -4.3 Ion-translocating oxidoreductase complex subunit A compare
MPMX20_04641 -1.1 -2.0 Phosphate transport system permease protein PstA compare
MPMX20_04469 -1.1 -1.4 Adenylate cyclase compare
MPMX20_00537 -1.1 -6.1 Trehalose-6-phosphate hydrolase compare
MPMX20_03212 -1.1 -3.1 NADH-quinone oxidoreductase subunit H compare
MPMX20_00276 -1.1 -7.8 UvrABC system protein A compare
MPMX20_03441 -1.1 -3.7 Protein RseC compare
MPMX20_02886 -1.0 -4.4 hypothetical protein compare
MPMX20_02598 -1.0 -1.4 tRNA-Tyr compare
MPMX20_01567 -1.0 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01073 -1.0 -2.0 Nucleoid-associated protein YbaB compare
MPMX20_03208 -1.0 -3.2 NADH-quinone oxidoreductase subunit L compare
MPMX20_01342 -1.0 -2.1 hypothetical protein compare
MPMX20_02478 -1.0 -3.0 Putrescine export system ATP-binding protein SapF compare
MPMX20_01548 -1.0 -1.6 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04162 -1.0 -2.8 3-dehydroquinate dehydratase compare
MPMX20_01286 -1.0 -0.8 Sec-independent protein translocase protein TatE compare
MPMX20_01866 -1.0 -2.2 Arginine N-succinyltransferase compare
MPMX20_03391 -1.0 -1.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms