Experiment set7IT074 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with L-Valine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
DVU1210 +1.0 0.7 conserved hypothetical protein (TIGR) compare
DVU1842 +0.9 1.9 lipoprotein, putative (TIGR) compare
DVU1075 rnpA +0.9 0.7 ribonuclease P protein component (TIGR) compare
DVU0451 +0.8 7.5 chloride channel family protein (TIGR) compare
DVU0257 +0.8 1.9 acetyltransferase, GNAT family (TIGR) compare
DVU2510 +0.8 0.8 penicillin-binding protein (TIGR) compare
DVU1630 ptsN +0.7 1.1 PTS system, IIA component (TIGR) compare
DVU1192 acyP +0.7 2.1 acylphosphatase (TIGR) compare
DVUA0089 +0.7 0.7 hypothetical protein (TIGR) compare
DVU1748 +0.7 0.7 conserved hypothetical protein (TIGR) compare
DVU0077 +0.7 5.5 conserved hypothetical protein (TIGR) compare
DVU0859 +0.7 4.8 hypothetical protein (TIGR) compare
DVU2774 +0.7 2.7 CBS domain protein/ACT domain protein (TIGR) compare
DVU0555 +0.7 1.2 hypothetical protein (TIGR) compare
DVU2865 +0.7 1.0 lipoprotein, putative (TIGR) compare
DVU0382 +0.7 1.9 hypothetical protein (TIGR) compare
DVU0426 +0.6 4.7 chromate transport family protein (TIGR) compare
DVU0764 hup-2 +0.6 2.7 DNA-binding protein HU (TIGR) compare
DORF7824 +0.6 4.4 SEED: FIG00603141: hypothetical protein compare
DVU0934 +0.6 1.4 hypothetical protein (TIGR) compare
DVU1844 +0.6 0.6 septum formation initiator family protein (TIGR) compare
DVU1947 oorC +0.6 3.7 pyruvate ferredoxin oxidoreductase, gamma subunit, putative (TIGR) compare
DVU0973 +0.5 0.3 4-hydroxybenzoate octaprenyltransferase, putative (TIGR) compare
DVU0946 +0.5 1.9 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU0163 +0.5 1.7 lipoprotein, putative (TIGR) compare
DVU0747 cysA +0.5 2.4 ABC transporter, ATP-binding protein (TIGR) compare
DVU0987 +0.5 1.1 heavy metal-binding domain protein (TIGR) compare
DVU0196 +0.5 0.8 hypothetical protein (TIGR) compare
DVU3066 +0.5 2.6 DNA-binding protein (TIGR) compare
DVU2115 +0.5 1.1 hypothetical protein (TIGR) compare
DORF831 +0.5 0.7 SEED: FIG00602593: hypothetical protein compare
DVU2283 +0.5 0.8 hypothetical protein (TIGR) compare
DVU2060 +0.4 1.4 hypothetical protein (TIGR) compare
DVU3322 +0.4 2.0 conserved domain protein (TIGR) compare
DVU2717 +0.4 1.4 hypothetical protein (TIGR) compare
DVU0726 tgt +0.4 2.7 queuine tRNA-ribosyltransferase (TIGR) compare
DORF37657 +0.4 0.8 SEED: Magnesium and cobalt efflux protein CorC compare
DVU0566 +0.4 1.6 GAF domain protein (TIGR) compare
DVU_tRNA-Leu-4 tRNA-Leu +0.4 1.0 tRNA with anticodon GAG for Leu (VIMSS-AUTO) compare
DVU1377 ilvN-2 +0.4 0.4 acetolactate synthase, small subunit (TIGR) compare
DVU2132 +0.4 1.2 hypothetical protein (TIGR) compare
DVU3032 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DVU3033 +0.4 3.2 iron-sulfur cluster-binding protein (TIGR) compare
DVU2850 +0.4 0.9 tail protein, putative (TIGR) compare
DVU1946 oorB +0.4 2.7 pyruvate ferredoxin oxidoreductase, beta subunit, putative (TIGR) compare
DVU1429 +0.4 0.5 GTP-binding protein (TIGR) compare
DVU3139 +0.4 0.8 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DORF14879 +0.4 1.9 no description compare
DVU3085 +0.4 0.7 hypothetical protein (TIGR) compare
DVU1764 +0.4 1.7 conserved hypothetical protein (TIGR) compare
DVU1687 +0.4 1.6 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1247 +0.4 1.4 hypothetical protein (TIGR) compare
DVU1777 cynT +0.4 0.5 carbonic anhydrase (TIGR) compare
DVU1682 +0.4 1.2 GAF domain protein (TIGR) compare
DORF28911 +0.4 2.3 SEED: FIG00602256: hypothetical protein compare
DVU1943 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1518 +0.3 1.0 transcriptional regulator cI, truncation (TIGR) compare
DVU1850 +0.3 0.9 CBS domain protein (TIGR) compare
DVU0974 +0.3 1.6 hypothetical protein (TIGR) compare
DVU1294 +0.3 1.6 conserved hypothetical protein (TIGR) compare
DVU1785 +0.3 1.8 membrane protein, MarC family (TIGR) compare
DVU0033 +0.3 1.3 isochorismatase family protein (TIGR) compare
DVU3392 glnA +0.3 2.2 glutamine synthetase, type I (TIGR) compare
DVU1729 +0.3 1.0 killer protein, putative (TIGR) compare
DVU2345 +0.3 0.9 hypothetical protein (TIGR) compare
DVU3065 +0.3 2.3 AMP-binding enzyme family protein (TIGR) compare
DVU0864 +0.3 1.0 glycoprotease family protein, putative (TIGR) compare
DVU2592 +0.3 1.8 hypothetical protein (TIGR) compare
DVU2303 +0.3 1.5 conserved domain protein (TIGR) compare
DVU0762 +0.3 2.3 conserved hypothetical protein (TIGR) compare
DVU1945 oorA +0.3 2.3 pyruvate ferredoxin oxidoreductase, alpha subunit, putative (TIGR) compare
DVU2169 +0.3 1.6 conserved hypothetical protein (TIGR) compare
DVU2692 +0.3 0.2 conserved domain protein (TIGR) compare
DVU2162 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1520 +0.3 0.3 hypothetical protein (TIGR) compare
DVU1239 +0.3 1.3 membrane protein, putative (TIGR) compare
DVU0746 cysW +0.3 1.8 ABC transporter, permease protein (TIGR) compare
DVU2391 +0.3 0.3 hypothetical protein (TIGR) compare
DVU0499 +0.3 1.0 conserved hypothetical protein TIGR00149 (TIGR) compare
DVUA0119.1 +0.3 2.1 SEED: Type III secretion spans bacterial envelope protein (YscO) compare
DVU0289 moaC +0.3 1.8 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU1948 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU2436 +0.3 2.3 conserved hypothetical protein (TIGR) compare
DVU2420 +0.3 1.5 conserved hypothetical protein (TIGR) compare
DVU1255 +0.3 0.9 Sua5/YciO/YrdC/YwlC family protein (TIGR) compare
DVU2245 +0.3 1.5 mutT/nudix family protein (TIGR) compare
DVU2794 +0.3 1.4 NADH:quinone oxidoreductase subunit RnfG (Shelley Haveman) compare
DVU3289 +0.3 1.1 hypothetical protein (TIGR) compare
DVU0293 +0.3 1.8 prokaryotic dksA/traR C4-type zinc finger family protein (TIGR) compare
DVUA0147 +0.3 2.5 conserved hypothetical protein (TIGR) compare
DVU2127 +0.3 2.3 von Willebrand factor type A domain protein (TIGR) compare
DVU2059 +0.3 2.1 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2516 +0.3 2.2 CBS domain protein (TIGR) compare
DVU2051 +0.3 1.4 hypothetical protein (TIGR) compare
DVU0511 +0.3 0.9 conserved hypothetical protein (TIGR) compare
DVU1599 crcB +0.3 1.4 crcB protein (TIGR) compare
DVU0117 +0.3 1.6 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2044 +0.3 0.5 hypothetical protein (TIGR) compare
DVU2831 +0.3 0.9 hypothetical protein (TIGR) compare
DVU3056 +0.3 1.3 conserved hypothetical protein (TIGR) compare
DVU1483 +0.3 2.0 tail fiber assembly protein, putative (TIGR) compare
DVU1692 +0.3 1.6 hypothetical protein (TIGR) compare
DVU1704 +0.3 0.3 conserved hypothetical protein (TIGR) compare
DVU2325 merP +0.3 0.5 mercuric transport protein periplasmic component (TIGR) compare
DVU2251 +0.3 1.3 DNA-binding protein (TIGR) compare
DVU1084 pstB-1 +0.3 2.0 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVUA0006 mgtE +0.3 1.1 magnesium transporter MgtE, putative (TIGR) compare
DVU0167 oppC +0.3 1.2 oligopeptide/dipeptide ABC transporter, permease protein (TIGR) compare
DVU2577 +0.3 1.3 DNA-binding response regulator, LuxR family (TIGR) compare
DVU0479 +0.3 1.6 serine/threonine protein kinase, putative (TIGR) compare
DVU0024 +0.3 0.5 conserved hypothetical protein (TIGR) compare
DVU3109 +0.3 1.1 iron-sulfur cluster-binding protein (TIGR) compare
DVU2212 +0.3 2.2 conserved hypothetical protein (TIGR) compare
DVU0580 moaA +0.3 0.9 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU0223 +0.3 0.6 conserved hypothetical protein (TIGR) compare
DORF19331 +0.3 0.8 no description compare
DVU1193 radC +0.3 1.0 DNA repair protein RadC (TIGR) compare
DVUA0105 +0.3 1.7 conserved hypothetical protein (TIGR) compare
DVU0320 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DORF45242 +0.3 2.0 no description compare
DVU1557 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1035 glk +0.3 0.9 glucokinase, putative (TIGR) compare
DVU2684 +0.3 0.8 hypothetical protein (TIGR) compare
DVUA0053 +0.2 1.6 conserved hypothetical protein (TIGR) compare
DVU1572 +0.2 0.6 transcriptional regulator, CarD family (TIGR) compare
DVU0596 lytR +0.2 1.1 DNA-binding response regulator LytR (TIGR) compare
DORF8571 +0.2 0.6 SEED: FIG00603598: hypothetical protein compare
DVU1412 +0.2 1.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU1814 +0.2 1.6 cytochrome c oxidase, subunit III, putative (TIGR) compare
DVU3047 +0.2 1.9 aminotransferase, class IV (TIGR) compare
DVU0884 ftrB +0.2 1.5 conserved hypothetical protein (TIGR) compare
DVU2049 +0.2 2.1 transposase OrfA, IS3 family, degenerate (TIGR) compare
DVU2634 +0.2 0.8 hypothetical protein (TIGR) compare
DORF43335 +0.2 0.4 no description compare
DVU3133 glpF +0.2 0.7 glycerol uptake facilitator protein (TIGR) compare
DVU2360 +0.2 1.7 oxidoreductase, FAD/NAD-binding family (TIGR) compare
DORF19118 +0.2 1.2 SEED: FIG00606735: hypothetical protein compare
DVU3050 +0.2 1.1 membrane protein, putative (TIGR) compare
DVU2957 +0.2 0.2 hypothetical protein (TIGR) compare
DVU2087 +0.2 1.6 hypothetical protein (TIGR) compare
DVU1658 +0.2 1.3 transaldolase, putative (TIGR) compare
DVU2795 nqr4 +0.2 1.2 NADH:quinone oxidoreductase subunit RnfE (Shelley Haveman) compare
DVU3362 +0.2 1.4 conserved hypothetical protein (TIGR) compare
DVUA0108 +0.2 1.3 hypothetical protein (TIGR) compare
DVU2166 +0.2 0.7 holin (TIGR) compare
DVU0302 +0.2 0.9 chemotaxis protein CheX, putative (TIGR) compare
DVU0761 +0.2 1.0 lipoprotein, putative (TIGR) compare
DVU2578 +0.2 1.6 response regulator (TIGR) compare
DVU1078 +0.2 1.9 R3H domain protein (TIGR) compare
DORF41147 +0.2 0.3 no description compare
DVU2474 +0.2 0.8 hypothetical protein (TIGR) compare
DVU2600 +0.2 0.7 hypothetical protein (TIGR) compare
DVU0639 pomB +0.2 1.6 chemotaxis protein PomB (TIGR) compare
DVU0368 +0.2 0.7 hypothetical protein (TIGR) compare
DVU2489 +0.2 1.6 hypothetical protein (TIGR) compare
DVU1540 purU +0.2 1.2 formyltetrahydrofolate deformylase (TIGR) compare
DVU2938 +0.2 1.4 conserved hypothetical protein (TIGR) compare
DVU1988 +0.2 1.8 membrane protein, putative (TIGR) compare
DVU3208 +0.2 1.2 membrane protein, putative (TIGR) compare
DVU0724 +0.2 1.4 sodium/alanine symporter family protein (TIGR) compare
DVU2285 +0.2 1.7 L-lactate permease family protein (TIGR) compare
DVU2539 +0.2 0.3 hypothetical protein (TIGR) compare
DVU1276 +0.2 1.6 hypothetical protein (TIGR) compare
DVU0951 moeA-2 +0.2 1.0 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU2055 metG +0.2 0.3 methionyl-tRNA synthetase (TIGR) compare
DVU3022 +0.2 0.1 sensory box histidine kinase/response regulator (TIGR) compare
DVU0274 +0.2 0.7 hypothetical protein (TIGR) compare
DVU0590 +0.2 0.8 hypothetical protein (TIGR) compare
DVU1218 +0.2 1.4 conserved hypothetical protein (TIGR) compare
DVU1698 +0.2 1.1 hypothetical protein (TIGR) compare
DVU0245 +0.2 1.6 protein phosphatase, putative (TIGR) compare
DVU2206 +0.2 1.6 conserved hypothetical protein (TIGR) compare
DVU2381 +0.2 1.8 conserved hypothetical protein (TIGR) compare
DVU2479 pstA-2 +0.2 1.6 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU1611 +0.2 0.9 molybdopterin oxidoreductase domain protein (TIGR) compare
DORF19323 +0.2 1.1 no description compare
DVU0270 +0.2 1.7 sensory box histidine kinase (TIGR) compare
DVU2522 +0.2 1.2 hypothetical protein (TIGR) compare
DORF35977 +0.2 1.4 no description compare
DVU1087 +0.2 1.0 conserved hypothetical protein (TIGR) compare
DVU1388 +0.2 1.4 conserved hypothetical protein (TIGR) compare
DVU0164 +0.2 1.5 cation efflux family protein (TIGR) compare
DVU1272 gspE +0.2 1.5 general secretion pathway protein E, putative (TIGR) compare
DVUA0047 +0.2 1.5 hypothetical protein (TIGR) compare
DVU2223 +0.2 0.4 hypothetical protein (TIGR) compare
DVU0540 +0.2 1.8 sensor histidine kinase (TIGR) compare
DVU0557 +0.2 1.1 ISDvu3, transposase OrfB, authentic point mutation (TIGR) compare
DORF10446 +0.2 1.4 SEED: FIG00604570: hypothetical protein compare
DVU1727 +0.2 0.5 hypothetical protein (TIGR) compare
DVU1153 +0.2 0.9 hypothetical protein (TIGR) compare
DVU2477 pstS +0.2 1.7 phosphate ABC transporter, periplasmic phosphate-binding protein, putative (TIGR) compare
DORF7327 +0.2 0.6 no description compare
DVU0384 flr +0.2 0.9 flavoredoxin (TIGR) compare
DVU3063 mviN-2 +0.2 1.2 integral membrane protein MviN (TIGR) compare
DVU1268 +0.2 0.8 hypothetical protein (TIGR) compare
DVU2789 +0.2 1.1 Gpr1/Fun34/YaaH family protein (TIGR) compare
DVU3313 +0.2 1.4 transcriptional regulator, LysR family (TIGR) compare
DVU2130 +0.2 1.2 hypothetical protein (TIGR) compare
DVU1262 pilT-1 +0.2 1.0 twitching motility protein PilT (TIGR) compare
DORF10286 +0.2 0.7 no description compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source L-Valine in Desulfovibrio vulgaris Hildenborough JW710

For nitrogen source L-Valine across organisms