Experiment set7IT073 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Gly-Glu

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08320 +3.5 9.1 molybdopterin molybdotransferase MoeA compare
MMP_RS02885 +3.1 16.8 molybdopterin biosynthesis protein compare
MMP_RS06720 +2.3 12.3 response regulator transcription factor compare
MMP_RS06715 +2.0 13.3 cache domain-containing protein compare
MMP_RS04885 +1.8 10.2 sulfite exporter TauE/SafE family protein compare
MMP_RS03390 +1.6 8.2 malate dehydrogenase compare
MMP_RS02290 +1.6 8.1 MBL fold metallo-hydrolase compare
MMP_RS00185 +1.5 10.7 potassium channel protein compare
MMP_RS00325 +1.4 2.5 RNA-binding protein compare
MMP_RS06870 +1.3 4.5 DedA family protein compare
MMP_RS00655 +1.2 3.5 hypothetical protein compare
MMP_RS08760 +1.2 3.7 hypothetical protein compare
MMP_RS07765 +1.2 5.6 sodium:alanine symporter family protein compare
MMP_RS05970 +1.1 4.0 class II SORL domain-containing protein compare
MMP_RS08310 +1.1 2.1 TMEM165/GDT1 family protein compare
MMP_RS08275 +1.0 4.5 hypothetical protein compare
MMP_RS04145 +1.0 1.6 hypothetical protein compare
MMP_RS05695 +1.0 5.3 phospholipase D-like domain-containing protein compare
MMP_RS02045 +1.0 1.6 tRNA-Met compare
MMP_RS06540 +0.9 2.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS03340 +0.9 0.7 ABC transporter ATP-binding protein compare
MMP_RS05975 +0.9 1.4 hypothetical protein compare
MMP_RS01650 +0.9 0.8 sulfurtransferase TusA family protein compare
MMP_RS06575 +0.9 3.7 fluoride efflux transporter CrcB compare
MMP_RS00660 +0.9 4.9 alkaline phosphatase family protein compare
MMP_RS00375 +0.9 4.9 ammonium transporter compare
MMP_RS00295 +0.9 2.0 gamma carbonic anhydrase family protein compare
MMP_RS00395 +0.9 1.2 MGMT family protein compare
MMP_RS07840 +0.8 2.1 ribonuclease III compare
MMP_RS06325 +0.8 1.2 hypothetical protein compare
MMP_RS06910 +0.8 4.1 RlmF-related methyltransferase compare
MMP_RS08410 +0.8 3.5 DUF169 domain-containing protein compare
MMP_RS02985 +0.8 1.5 hypothetical protein compare
MMP_RS06685 +0.8 4.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS06705 +0.8 3.8 formate/nitrite transporter family protein compare
MMP_RS06345 +0.8 4.4 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS05110 +0.8 3.9 16S ribosomal RNA methyltransferase A compare
MMP_RS03220 +0.8 2.1 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS00430 +0.8 1.5 hypothetical protein compare
MMP_RS00855 +0.8 3.6 DUF367 family protein compare
MMP_RS08670 +0.7 2.4 metallophosphoesterase compare
MMP_RS08160 +0.7 3.1 EamA family transporter compare
MMP_RS08390 +0.7 2.2 DUF5400 domain-containing protein compare
MMP_RS03465 +0.7 0.9 adenine phosphoribosyltransferase compare
MMP_RS06530 +0.7 2.0 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS08370 +0.7 0.4 cation:proton antiporter subunit C compare
MMP_RS00290 +0.7 2.8 hypothetical protein compare
MMP_RS06570 +0.7 2.0 DUF190 domain-containing protein compare
MMP_RS07095 +0.7 2.4 PspC domain-containing protein compare
MMP_RS08070 +0.7 2.9 DUF2096 domain-containing protein compare
MMP_RS08640 +0.7 3.9 TIM barrel protein compare
MMP_RS01495 +0.7 3.8 TraB/GumN family protein compare
MMP_RS06860 +0.7 1.1 4Fe-4S binding protein compare
MMP_RS00085 +0.7 3.5 DNA cytosine methyltransferase compare
MMP_RS07960 +0.7 3.3 sugar phosphate isomerase/epimerase compare
MMP_RS01630 +0.7 3.3 N-glycosylase/DNA lyase compare
MMP_RS02745 +0.7 1.6 hypothetical protein compare
MMP_RS01660 +0.7 2.2 hypothetical protein compare
MMP_RS06650 +0.7 2.9 glycoside hydrolase family 57 protein compare
MMP_RS02410 +0.7 1.9 ABC transporter substrate-binding protein compare
MMP_RS07835 +0.6 1.7 TldD/PmbA family protein compare
MMP_RS07645 +0.6 2.2 aldehyde dehydrogenase family protein compare
MMP_RS03250 +0.6 1.0 MJ1244 family protein compare
MMP_RS00950 +0.6 2.2 site-2 protease family protein compare
MMP_RS00345 +0.6 2.1 DUF2666 domain-containing protein compare
MMP_RS08285 +0.6 2.2 serine/threonine protein kinase compare
MMP_RS08445 +0.6 1.4 DUF2099 family protein compare
MMP_RS05155 +0.6 2.6 hypothetical protein compare
MMP_RS03895 +0.6 1.7 hypothetical protein compare
MMP_RS04740 +0.6 1.5 DUF473 domain-containing protein compare
MMP_RS00130 +0.6 0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS04800 +0.6 2.7 chemotaxis protein CheW compare
MMP_RS00990 +0.6 1.4 hypothetical protein compare
MMP_RS01120 +0.6 3.1 permease compare
MMP_RS03385 +0.6 0.6 cation diffusion facilitator family transporter compare
MMP_RS07805 +0.6 2.0 ABC transporter permease compare
MMP_RS04050 +0.6 2.1 hypothetical protein compare
MMP_RS03150 +0.6 3.2 phosphoglycerate mutase compare
MMP_RS08700 +0.6 2.5 hypothetical protein compare
MMP_RS01200 +0.6 1.7 hypothetical protein compare
MMP_RS05985 +0.6 1.0 hypothetical protein compare
MMP_RS01635 +0.5 2.7 thiamine pyrophosphate-dependent enzyme compare
MMP_RS01055 +0.5 2.1 hypothetical protein compare
MMP_RS07910 +0.5 2.3 NAD(P)H-hydrate dehydratase compare
MMP_RS03065 +0.5 1.1 AzlC family ABC transporter permease compare
MMP_RS07915 +0.5 2.0 DUF4870 domain-containing protein compare
MMP_RS01785 +0.5 2.2 hypothetical protein compare
MMP_RS01135 +0.5 3.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS07560 +0.5 1.4 prefoldin subunit alpha compare
MMP_RS01320 +0.5 1.3 hypothetical protein compare
MMP_RS08555 +0.5 1.2 hypothetical protein compare
MMP_RS04165 +0.5 1.8 TetR/AcrR family transcriptional regulator compare
MMP_RS06660 +0.5 1.9 glycosyltransferase family 4 protein compare
MMP_RS05675 +0.5 1.2 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS00650 +0.5 2.1 ABC transporter ATP-binding protein compare
MMP_RS06045 +0.5 3.0 DNA polymerase compare
MMP_RS02375 +0.5 2.5 hypothetical protein compare
MMP_RS00335 +0.5 1.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS08405 +0.5 2.4 MFS transporter compare
MMP_RS08485 +0.5 2.4 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS05365 +0.5 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08085 +0.5 2.8 hypothetical protein compare
MMP_RS00400 +0.5 1.6 tributyrin esterase compare
MMP_RS05175 +0.5 1.4 hypothetical protein compare
MMP_RS01620 +0.5 1.6 hypothetical protein compare
MMP_RS02475 +0.5 0.9 hypothetical protein compare
MMP_RS08235 +0.5 2.4 hypothetical protein compare
MMP_RS08835 +0.5 1.8 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS05800 +0.5 2.0 B12-binding domain-containing radical SAM protein compare
MMP_RS08280 +0.5 0.9 proteasome assembly chaperone family protein compare
MMP_RS04060 +0.4 1.2 hypothetical protein compare
MMP_RS00105 +0.4 2.5 hypothetical protein compare
MMP_RS05795 +0.4 1.0 redox-regulated ATPase YchF compare
MMP_RS07770 +0.4 1.5 alanine racemase compare
MMP_RS02705 +0.4 1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08775 +0.4 1.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS08325 +0.4 2.3 hypothetical protein compare
MMP_RS08850 +0.4 3.4 hypothetical protein compare
MMP_RS07905 +0.4 1.9 DUF3343 domain-containing protein compare
MMP_RS06065 +0.4 3.2 iron ABC transporter substrate-binding protein compare
MMP_RS07925 +0.4 1.4 haloacid dehalogenase compare
MMP_RS05940 +0.4 2.2 corrinoid protein compare
MMP_RS06300 +0.4 2.2 ABC transporter substrate-binding protein compare
MMP_RS07800 +0.4 2.1 ATP-binding cassette domain-containing protein compare
MMP_RS01550 +0.4 2.1 DUF1624 domain-containing protein compare
MMP_RS01100 +0.4 0.5 ABC transporter ATP-binding protein compare
MMP_RS07900 +0.4 1.0 YeeE/YedE family protein compare
MMP_RS05715 +0.4 1.7 hypothetical protein compare
MMP_RS05085 +0.4 1.6 AAA family ATPase compare
MMP_RS04190 +0.4 1.4 hypothetical protein compare
MMP_RS09060 +0.4 2.2 hypothetical protein compare
MMP_RS08075 +0.4 1.4 DUF749 domain-containing protein compare
MMP_RS06680 +0.4 2.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS08620 +0.4 1.3 flagellar accessory protein FlaH compare
MMP_RS06150 +0.4 1.9 hypothetical protein compare
MMP_RS07650 +0.4 2.3 TldD/PmbA family protein compare
MMP_RS06760 +0.4 1.0 hypothetical protein compare
MMP_RS02770 +0.4 1.2 hypothetical protein compare
MMP_RS09065 +0.4 2.4 hypothetical protein compare
MMP_RS00945 +0.4 0.5 PadR family transcriptional regulator compare
MMP_RS08205 +0.4 2.3 stage II sporulation protein M compare
MMP_RS01130 +0.4 1.9 flavoprotein compare
MMP_RS08665 +0.4 2.6 hypothetical protein compare
MMP_RS08580 +0.4 0.8 flagellin compare
MMP_RS03965 +0.4 0.8 hypothetical protein compare
MMP_RS02390 +0.4 1.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS01965 +0.4 1.1 DUF1616 domain-containing protein compare
MMP_RS08990 +0.4 1.7 hypothetical protein compare
MMP_RS03130 +0.4 1.6 hypothetical protein compare
MMP_RS00195 +0.4 3.1 DUF4013 domain-containing protein compare
MMP_RS01675 +0.4 0.6 hypothetical protein compare
MMP_RS04945 +0.4 1.1 hypothetical protein compare
MMP_RS09030 +0.4 1.4 hypothetical protein compare
MMP_RS06440 +0.4 1.2 CBS domain-containing protein compare
MMP_RS00570 +0.4 0.6 protein-L-isoaspartate O-methyltransferase compare
MMP_RS02470 +0.4 0.3 helix-turn-helix transcriptional regulator compare
MMP_RS07860 +0.4 0.3 hypothetical protein compare
MMP_RS00665 +0.4 1.3 hypothetical protein compare
MMP_RS07815 +0.4 0.4 DUF2120 domain-containing protein compare
MMP_RS06500 +0.4 2.0 ATP-binding protein compare
MMP_RS08480 +0.4 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS06655 +0.3 1.5 glycoside hydrolase family 15 protein compare
MMP_RS08265 +0.3 1.3 rubrerythrin compare
MMP_RS00640 +0.3 1.5 ABC transporter substrate-binding protein compare
MMP_RS08625 +0.3 2.2 type II/IV secretion system ATPase subunit compare
MMP_RS03215 +0.3 2.2 MBL fold metallo-hydrolase compare
MMP_RS04620 +0.3 1.7 cobalt transporter CbiM compare
MMP_RS01145 +0.3 1.6 ABC transporter ATP-binding protein compare
MMP_RS06050 +0.3 1.9 ZIP family metal transporter compare
MMP_RS05825 +0.3 1.3 peptidyl-prolyl cis-trans isomerase compare
MMP_RS01060 +0.3 2.0 calcium/sodium antiporter compare
MMP_RS06250 +0.3 1.3 hypothetical protein compare
MMP_RS07720 +0.3 1.7 4Fe-4S binding protein compare
MMP_RS00675 +0.3 0.3 nitroreductase family protein compare
MMP_RS07100 +0.3 1.8 hypothetical protein compare
MMP_RS08610 +0.3 1.4 flagellar protein F compare
MMP_RS08380 +0.3 0.9 phosphatase PAP2 family protein compare
MMP_RS05490 +0.3 1.0 IMPACT family protein compare
MMP_RS07195 +0.3 1.2 M20 family metallo-hydrolase compare
MMP_RS08685 +0.3 1.6 hypothetical protein compare
MMP_RS01090 +0.3 1.7 ABC transporter substrate-binding protein compare
MMP_RS08130 +0.3 1.5 IGHMBP2 family helicase compare
MMP_RS06665 +0.3 1.5 glycogen/starch synthase compare
MMP_RS02000 +0.3 1.7 radical SAM protein compare
MMP_RS03675 +0.3 1.7 RimK family alpha-L-glutamate ligase compare
MMP_RS07775 +0.3 1.4 alanine dehydrogenase compare
MMP_RS05070 +0.3 1.4 4Fe-4S dicluster domain-containing protein compare
MMP_RS05090 +0.3 1.3 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS07885 +0.3 0.7 tripartite tricarboxylate transporter permease compare
MMP_RS01280 +0.3 1.9 DUF515 domain-containing protein compare
MMP_RS08200 +0.3 1.7 archaeosine synthase subunit alpha compare
MMP_RS03780 +0.3 1.3 4Fe-4S binding protein compare
MMP_RS06515 +0.3 0.7 UPF0489 family protein compare
MMP_RS00795 +0.3 1.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS00825 +0.3 0.8 fumarylacetoacetate hydrolase family protein compare
MMP_RS05835 +0.3 0.2 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS02645 +0.3 1.5 ArsR family transcriptional regulator compare
MMP_RS02305 +0.3 1.7 DUF378 domain-containing protein compare
MMP_RS06155 +0.3 0.9 DUF4186 domain-containing protein compare
MMP_RS08675 +0.3 0.5 class III signal peptide-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Gly-Glu across organisms