Experiment set6IT043 for Caulobacter crescentus NA1000

200 most detrimental genes:

gene	name	fitness	t score	description
CCNA_00280		+5.4	46.0	tRNA pseudouridine synthase A
CCNA_00471		+4.5	34.7	GDP-L-fucose synthase
CCNA_02732		+4.4	14.1	hypothetical protein
CCNA_02283		+3.9	21.1	HNH endonuclease family protein
CCNA_00161		+3.8	26.4	hypothetical protein
CCNA_01923		+3.6	29.8	ATP-dependent RNA helicase
CCNA_03998		+3.5	27.4	GT1/WbuB-like N-acetyl-L-fucosamine transferase
CCNA_02910		+3.4	30.7	TonB-dependent receptor
CCNA_01433		+3.3	22.0	integration host factor alpha-subunit
CCNA_00485		+3.3	29.9	ribosomal large subunit pseudouridine synthase D
CCNA_00162		+3.3	17.7	hypothetical protein
CCNA_01393		+3.3	29.4	soluble lytic murein transglycosylase
CCNA_00054		+3.1	24.9	tRNA 2-methylthioadenosine synthase
CCNA_00472		+3.0	21.1	GDP-mannose 4,6 dehydratase
CCNA_00164		+3.0	22.7	O-antigen polymerase
CCNA_00769		+3.0	17.0	TetR family transcriptional regulator
CCNA_02575		+2.9	12.8	hypothetical protein
CCNA_01784		+2.9	5.8	hypothetical protein
CCNA_00168		+2.9	24.1	polysaccharide export protein
CCNA_00163		+2.9	23.1	exopolysaccharide transport family protein
CCNA_02287		+2.8	21.3	TetR-family transcriptional regulator
CCNA_01851		+2.6	22.4	quinol cytochrome oxidase polypeptide II
CCNA_00167		+2.6	17.4	metallophosphatase family protein
CCNA_01430		+2.6	15.9	hypothetical protein
CCNA_03062		+2.5	15.2	cell wall hydrolase family protein
CCNA_03384		+2.5	2.7	LSU ribosomal protein L31P
CCNA_02467		+2.5	20.3	polyisoprenylphosphate hexose-1-phosphotransferase pssZ
CCNA_02098		+2.5	17.2	molybdopterin-guanine dinucleotide biosynthesis protein A
CCNA_03244		+2.5	16.6	GntR-family transcriptional regulator
CCNA_03105		+2.5	12.2	DnaJ domain protein
CCNA_03229		+2.5	21.2	FAD dependent oxidoreductase
CCNA_03453		+2.4	16.5	AcrR-family transcriptional regulator
CCNA_02741		+2.3	15.1	hypothetical protein
CCNA_03813		+2.2	15.3	intermediate filament-like cell shape determinant creS
CCNA_03235		+2.2	17.7	spermidine/putrescine transport ATP-binding protein potA
CCNA_03637		+2.2	17.6	triphosphate tunnel metalloenzyme family protein
CCNA_00233		+2.1	16.1	UDP-N-acetylglucosamine 4,6-dehydratase
CCNA_03701		+2.1	4.1	integration host factor beta-subunit
CCNA_03239		+2.1	15.1	spermidine/putrescine-binding protein
CCNA_00470		+2.1	15.2	O-antigen polymerase
CCNA_02961		+2.1	15.6	NeuB-family N-acetylneuraminate synthase
CCNA_02339		+2.0	15.8	methyltransferase
CCNA_01954		+2.0	10.4	ribonuclease E
CCNA_03353		+2.0	13.0	metallophosphatase domain protein
CCNA_03236		+2.0	11.5	spermidine/putrescine transport system permease protein potC
CCNA_03872		+2.0	10.5	tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase
CCNA_01914		+2.0	15.4	16S rRNA m(2)G 1207 methyltransferase RsmC
CCNA_01059		+1.9	15.1	S-layer protein rsaA
CCNA_03936		+1.9	9.5	hypothetical protein
CCNA_03129		+1.9	14.3	peptidoglycan-specific endopeptidase, M23 family
CCNA_03163		+1.9	12.9	peptidyl-prolyl cis-trans isomerase
CCNA_00768		+1.9	8.2	hypothetical protein
CCNA_03238		+1.8	12.4	ABC-type spermidine/putrescine transport system, permease component II
CCNA_00435		+1.8	15.7	L-proline transporter (from data)
CCNA_01224		+1.8	3.5	O-antigen membrane transport protein
CCNA_01849		+1.8	12.9	quinol cytochrome oxidase polypeptide III
CCNA_00795		+1.8	4.5	two-component response regulator FixJ
CCNA_02026		+1.7	11.0	hypothetical protein
CCNA_01850		+1.7	13.0	quinol cytochrome oxidase polypeptide I
CCNA_03961		+1.7	8.5	hypothetical protein
CCNA_00796		+1.7	8.1	oxygen sensory histidine kinase FixL
CCNA_03955		+1.7	3.0	hypothetical protein
CCNA_02030		+1.7	5.2	hypothetical protein
CCNA_00234		+1.7	13.6	WecE-family cell wall biogenesis enzyme
CCNA_02330		+1.7	10.5	hypothetical protein
CCNA_00051		+1.6	10.5	magnesium and cobalt efflux protein CorC
CCNA_03473		+1.6	4.2	death on curing toxin protein doc
CCNA_03107		+1.6	10.7	cytidine deaminase
CCNA_01676		+1.6	0.9	hypothetical protein
CCNA_00852		+1.6	0.8	TetR family transcriptional regulator
CCNA_00998		+1.5	10.2	ROS/MUCR transcriptional regulator
CCNA_02448		+1.5	11.7	hypothetical protein
CCNA_03964		+1.5	6.8	hypothetical protein
CCNA_02728		+1.5	9.7	hypothetical protein
CCNA_02324		+1.5	9.1	heat shock protein 33 hsp33
CCNA_00028		+1.5	6.3	TonB-dependent receptor
CCNA_01181		+1.5	8.7	hypothetical protein
CCNA_03612		+1.5	12.3	HTH XRE-family transcriptional regulator
CCNA_03431		+1.4	12.9	membrane-bound lytic murein transglycosylase B
CCNA_02619		+1.4	11.5	stomatin/prohibitin-related protein
CCNA_03858		+1.4	9.5	protein translocase subunit secB
CCNA_01445		+1.4	6.9	hypothetical protein
CCNA_02415		+1.4	8.9	Xre-family transcriptional regulator
CCNA_02025		+1.4	5.9	hypothetical protein
CCNA_00555		+1.4	9.5	nitrogen regulatory protein P-II
CCNA_02151		+1.4	4.8	exodeoxyribonuclease VII small subunit
CCNA_01385		+1.4	8.9	rRNA methylase
CCNA_00441		+1.3	10.3	chemotaxis receiver domain protein cheYI
CCNA_02221		+1.3	11.1	methionine synthase I metH
CCNA_01757		+1.3	0.8	dimethyladenosine transferase
CCNA_03776		+1.3	9.7	2'-5' RNA ligase
CCNA_00032		+1.3	5.5	antitoxin protein VapB
CCNA_03240		+1.3	8.4	glutamine synthetase
CCNA_03403		+1.3	5.5	small coiled-coil domain protein
CCNA_00872		+1.3	5.0	glutaredoxin
CCNA_00053		+1.3	10.1	phosphate starvation-inducible protein PhoH
CCNA_00056		+1.3	10.0	ribosomal-protein-S18-alanine acetyltransferase
CCNA_01814		+1.3	6.3	nitrogen regulation protein ntrB
CCNA_02173		+1.3	9.1	ABC transporter ATP-binding protein
CCNA_00036		+1.3	1.9	ribosome-binding factor A
CCNA_02244		+1.3	9.5	aminotransferase class I family protein
CCNA_03871		+1.3	4.6	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
CCNA_01526		+1.2	10.0	flagellar biosynthesis regulatory protein flaF
CCNA_02021		+1.2	6.5	hypothetical protein
CCNA_01845		+1.2	5.4	two-component response regulator protein
CCNA_01155		+1.2	10.7	TonB-dependent outer membrane receptor
CCNA_02066		+1.2	6.6	phytoene/squalene synthase family protein
CCNA_02957		+1.2	7.3	ArsR-family transcriptional regulator
CCNA_00447		+1.2	7.4	chemotaxis protein cheD
CCNA_01644		+1.2	6.6	chemotaxis motB protein
CCNA_01071		+1.2	8.7	alpha-ketoglutarate permease
CCNA_01847		+1.2	8.9	cytochrome c oxidase assembly protein Surf1
CCNA_02103		+1.2	7.0	hypothetical protein
CCNA_03604		+1.2	5.7	hypothetical protein
CCNA_00446		+1.2	6.5	chemotaxis receiver domain protein cheYII
CCNA_01505		+1.2	4.6	hypothetical protein
CCNA_00787		+1.2	8.6	chemotaxis motA protein
CCNA_02137		+1.2	10.2	endoglucanase H
CCNA_02257		+1.2	6.8	fliN family protein
CCNA_01840		+1.2	9.9	MerR-family transcriptional regulator
CCNA_00931		+1.2	9.9	GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase
CCNA_03951		+1.2	6.8	hypothetical protein
CCNA_00442		+1.2	9.9	chemotaxis histidine kinase protein cheAI
CCNA_00693		+1.2	5.4	heat shock protein 15
CCNA_02966		+1.1	3.0	non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase
CCNA_02298		+1.1	7.4	MJ0042 family finger-like domain protein
CCNA_00675		+1.1	6.6	VapC-like PIN domain ribonuclease
CCNA_00338		+1.1	10.0	TonB-dependent receptor
CCNA_02666		+1.1	5.8	chemotactic signal-response protein CheL
CCNA_00929		+1.1	9.0	Riboflavin-specific deaminase family protein
CCNA_02073		+1.1	5.6	cupin domain transcriptional regulator
CCNA_02109		+1.1	1.8	thiamine biosynthesis protein thiC
CCNA_00448		+1.1	7.2	cheU protein
CCNA_03123		+1.1	9.4	ArsR-family transcriptional regulator
CCNA_03626		+1.1	8.4	ATP phosphoribosyltransferase (EC 2.4.2.17) (from data)
CCNA_02187		+1.1	5.9	adapter for ClpXP proteolysis of tmRNA-tagged proteins SspB
CCNA_01530		+1.1	8.8	flagellin FljJ
CCNA_01931		+1.1	8.0	TetR-family transcriptional regulator
CCNA_01712		+1.1	9.0	CopY/TcrY family transcriptional repressor
CCNA_03627		+1.1	7.8	ATP phosphoribosyltransferase regulatory subunit
CCNA_01173		+1.1	5.0	chorismate mutase
CCNA_02534		+1.1	2.2	hypothetical protein
CCNA_03824		+1.1	6.6	2-polyprenylphenol 6-hydroxylase accessory protein UbiB
CCNA_00932		+1.1	8.3	6,7-dimethyl-8-ribityllumazine synthase
CCNA_03799		+1.1	4.9	short chain dehydrogenase
CCNA_02379		+1.1	7.4	hypothetical protein
CCNA_01655		+1.1	6.4	cyclophilin-type peptidylprolyl cis-trans isomerase
CCNA_00443		+1.1	7.0	chemotaxis protein cheW
CCNA_02028		+1.1	1.7	NTF2 superfamily protein
CCNA_02125		+1.1	9.1	polar development protein podJ
CCNA_00444		+1.1	8.1	chemotaxis protein methyltransferase
CCNA_01848		+1.1	7.3	quinol cytochrome oxidase polypeptide IV
CCNA_00438		+1.0	6.3	hypothetical protein
CCNA_02976		+1.0	5.7	MCP-signal associated domain protein
CCNA_00369		+1.0	8.8	magnesium and cobalt efflux protein corC-like protein
CCNA_00107		+1.0	3.4	Trm112p-like protein
CCNA_03552		+1.0	7.7	polysaccharide deacetylase
CCNA_03756		+1.0	7.8	cation efflux family transporter
CCNA_00031		+1.0	6.5	toxin protein VapC
CCNA_01186		+1.0	7.2	hypothetical protein
CCNA_00789		+1.0	1.3	hypoxia transcriptional regulator FixK
CCNA_02063		+1.0	6.2	beta-barrel assembly machine (BAM) protein BamD
CCNA_01074		+1.0	1.7	entericidin B-like protein
CCNA_02077		+1.0	2.3	5'(3')-nucleotidase/polyphosphatase SurE
CCNA_02000		+1.0	0.7	SSU ribosomal protein S2P
CCNA_03479		+1.0	6.5	MarR-family transcriptional regulator
CCNA_00930		+1.0	7.7	riboflavin synthase alpha chain
CCNA_01681		+1.0	4.0	RimI-like acetyltransferase
CCNA_02172		+1.0	7.5	ABC-type transporter, permease component
CCNA_00237		+1.0	7.7	two-component response regulator chvI
CCNA_00085		+1.0	8.1	dienelactone hydrolase-related protein
CCNA_02148		+1.0	2.3	hypothetical protein
CCNA_00439		+1.0	7.9	methyl-accepting chemotaxis protein
CCNA_00938		+1.0	8.3	acetyl-CoA acetyltransferase
CCNA_01371		+1.0	3.9	hypothetical protein
CCNA_02338		+1.0	7.7	hypothetical protein
CCNA_02949		+1.0	5.6	S-adenosylmethionine-dependent methyltransferase related protein
CCNA_01858		+1.0	6.9	AraC-family transcriptional regulator
CCNA_00947		+1.0	8.3	flagellar hook protein FlgE
CCNA_01528		+1.0	7.2	flagellin fljK
CCNA_02980		+1.0	8.3	tryptophan 2,3-dioxygenase
CCNA_00750		+1.0	7.1	FeaR-family transcriptional regulator
CCNA_03808		+1.0	6.6	organic solvent resistance transport system Ttg2C protein
CCNA_03497		+1.0	4.9	hypothetical protein
CCNA_00895		+1.0	5.3	hypothetical protein
CCNA_02124		+1.0	5.3	hypothetical protein
CCNA_03215		+1.0	7.3	ARO8 family aminotransferase/HTH DNA-binding protein
CCNA_01918		+1.0	6.3	cyclic di-GMP effector protein PopA
CCNA_02145		+1.0	5.3	flagellar L-ring protein flgH
CCNA_R0054		+1.0	2.6	tRNA-Gly
CCNA_01680		+1.0	6.2	succinylarginine dihydrolase
CCNA_01175		+1.0	5.8	uroporphyrin-III C-methyltransferase
CCNA_01412		+1.0	7.9	acyl-CoA dehydrogenase, short-chain specific
CCNA_02340		+1.0	5.1	methyltransferase
CCNA_02297		+1.0	5.1	hypoxanthine-guanine phosphoribosyltransferase
CCNA_01742		+0.9	6.5	hypothetical protein
CCNA_01413		+0.9	7.2	phosphoglycerate mutase family protein
CCNA_03755		+0.9	0.6	bifunctional D-glycero-D-manno-heptose-7-phosphate 1-kinase/D-glycero-D-manno-heptose-1-phosphate adenylyltransferase
CCNA_02363		+0.9	6.2	hypothetical protein
CCNA_00943		+0.9	8.0	flagellar hook-associated protein FlaN

Specific Phenotypes

For 8 genes in this experiment