Experiment set5S679 for Mucilaginibacter yixingensis YX-36 DSM 26809

Compare to:

D-Cellobiose carbon source; 3 days

200 most detrimental genes:

  gene name fitness t score description  
ABZR88_RS03165 +9.6 14.5 hypothetical protein compare
ABZR88_RS19830 +5.4 30.5 SusC/RagA family TonB-linked outer membrane protein compare
ABZR88_RS13225 +3.3 19.5 NUDIX domain-containing protein compare
ABZR88_RS20540 +3.1 18.2 hypothetical protein compare
ABZR88_RS16290 +3.0 8.1 helix-turn-helix domain-containing protein compare
ABZR88_RS21610 +2.9 13.9 asparaginase compare
ABZR88_RS01965 +2.8 12.9 carbohydrate porin compare
ABZR88_RS15690 +2.8 17.5 DUF4783 domain-containing protein compare
ABZR88_RS20945 +2.7 15.9 DUF4199 domain-containing protein compare
ABZR88_RS14555 +2.6 16.4 response regulator compare
ABZR88_RS09255 +2.5 6.4 PhoH family protein compare
ABZR88_RS07755 +2.5 14.2 DUF4290 domain-containing protein compare
ABZR88_RS14630 +2.4 13.0 SulP family inorganic anion transporter compare
ABZR88_RS18710 +2.4 10.2 GbsR/MarR family transcriptional regulator compare
ABZR88_RS04735 +2.2 2.8 sensor histidine kinase KdpD compare
ABZR88_RS19825 +2.1 6.1 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
ABZR88_RS14990 +2.1 14.9 TolC family protein compare
ABZR88_RS20610 +2.1 3.2 hypothetical protein compare
ABZR88_RS06805 +2.0 9.8 C40 family peptidase compare
ABZR88_RS20165 +1.9 4.3 ribosome silencing factor compare
ABZR88_RS14985 +1.9 10.0 efflux RND transporter periplasmic adaptor subunit compare
ABZR88_RS12760 +1.8 11.9 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase compare
ABZR88_RS16640 +1.8 8.1 ATP-binding protein compare
ABZR88_RS20255 +1.7 5.3 prephenate dehydrogenase compare
ABZR88_RS14625 +1.7 9.2 hypothetical protein compare
ABZR88_RS04915 +1.6 4.0 MlaD family protein compare
ABZR88_RS03000 +1.6 7.9 sterol desaturase family protein compare
ABZR88_RS17090 +1.5 7.8 hemolysin family protein compare
ABZR88_RS14135 +1.5 3.4 DUF3276 family protein compare
ABZR88_RS15680 +1.5 5.4 hypothetical protein compare
ABZR88_RS04740 +1.5 5.4 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB compare
ABZR88_RS20440 +1.5 2.9 M48 family metallopeptidase compare
ABZR88_RS08830 +1.4 1.0 thiamine phosphate synthase compare
ABZR88_RS09260 +1.4 2.4 four helix bundle protein compare
ABZR88_RS13210 +1.4 1.4 Gfo/Idh/MocA family protein compare
ABZR88_RS20990 +1.4 7.7 TetR/AcrR family transcriptional regulator compare
ABZR88_RS03985 +1.4 6.3 RluA family pseudouridine synthase compare
ABZR88_RS12730 +1.4 9.0 hypothetical protein compare
ABZR88_RS05045 +1.3 1.4 monofunctional biosynthetic peptidoglycan transglycosylase compare
ABZR88_RS14995 +1.3 6.7 cell wall metabolism sensor histidine kinase WalK compare
ABZR88_RS06550 +1.3 7.4 thioesterase family protein compare
ABZR88_RS04920 +1.3 3.5 ABC transporter ATP-binding protein compare
ABZR88_RS06815 +1.3 7.5 acyl-CoA reductase compare
ABZR88_RS09380 +1.3 7.9 7-carboxy-7-deazaguanine synthase QueE compare
ABZR88_RS17795 +1.3 6.1 ribosome-associated translation inhibitor RaiA compare
ABZR88_RS12770 +1.3 8.2 polysaccharide biosynthesis protein compare
ABZR88_RS19835 +1.3 6.0 PadR family transcriptional regulator compare
ABZR88_RS03295 +1.3 5.5 tetratricopeptide repeat protein compare
ABZR88_RS03170 +1.3 3.4 glycoside hydrolase family 88 protein compare
ABZR88_RS00135 +1.2 4.2 HIT family protein compare
ABZR88_RS10440 +1.2 6.2 protein-glutamate O-methyltransferase CheR compare
ABZR88_RS13785 +1.2 1.5 SRPBCC domain-containing protein compare
ABZR88_RS03565 +1.2 1.2 O-methyltransferase compare
ABZR88_RS03285 +1.2 6.5 VWA domain-containing protein compare
ABZR88_RS10375 +1.2 7.6 molecular chaperone HtpG compare
ABZR88_RS21170 +1.2 3.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABZR88_RS16920 +1.2 5.7 Crp/Fnr family transcriptional regulator compare
ABZR88_RS06345 +1.2 5.0 diaminopimelate decarboxylase compare
ABZR88_RS04750 +1.2 6.7 hypothetical protein compare
ABZR88_RS02995 +1.1 5.2 phosphatase PAP2 family protein compare
ABZR88_RS12755 +1.1 9.8 glycosyltransferase family 4 protein compare
ABZR88_RS17530 +1.1 6.0 NAD-dependent epimerase compare
ABZR88_RS08015 +1.1 7.8 HD family phosphohydrolase compare
ABZR88_RS06340 +1.1 6.4 urea transporter compare
ABZR88_RS14635 +1.1 6.8 carbonate dehydratase compare
ABZR88_RS12765 +1.1 6.8 NAD-dependent epimerase/dehydratase family protein compare
ABZR88_RS04925 +1.1 1.7 ABC transporter permease compare
ABZR88_RS14980 +1.1 5.7 efflux RND transporter permease subunit compare
ABZR88_RS12725 +1.1 7.9 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABZR88_RS22305 +1.1 4.4 rhodanese-related sulfurtransferase compare
ABZR88_RS09220 +1.0 5.0 gliding motility protein GldC compare
ABZR88_RS03465 +1.0 3.4 four helix bundle protein compare
ABZR88_RS03300 +1.0 6.4 BatD family protein compare
ABZR88_RS11525 +1.0 7.0 hypothetical protein compare
ABZR88_RS21140 +1.0 5.3 tRNA pseudouridine(38-40) synthase TruA compare
ABZR88_RS03270 +1.0 4.9 MoxR family ATPase compare
ABZR88_RS03275 +1.0 4.2 DUF58 domain-containing protein compare
ABZR88_RS06350 +1.0 3.5 ATP-grasp domain-containing protein compare
ABZR88_RS15000 +1.0 6.8 response regulator transcription factor compare
ABZR88_RS13975 +1.0 3.4 glycosyltransferase compare
ABZR88_RS09825 +1.0 4.2 hypothetical protein compare
ABZR88_RS18215 +1.0 2.7 T9SS type A sorting domain-containing protein compare
ABZR88_RS16545 +1.0 2.8 NAD(P)/FAD-dependent oxidoreductase compare
ABZR88_RS17370 +0.9 3.3 hypothetical protein compare
ABZR88_RS16160 +0.9 4.1 LacI family DNA-binding transcriptional regulator compare
ABZR88_RS01625 +0.9 3.9 hypothetical protein compare
ABZR88_RS18040 +0.9 2.6 aspartate aminotransferase family protein compare
ABZR88_RS12750 +0.9 4.0 sugar transferase compare
ABZR88_RS13970 +0.9 6.2 RNA polymerase sigma factor compare
ABZR88_RS04745 +0.9 6.2 glycosyltransferase family 2 protein compare
ABZR88_RS22360 +0.9 2.4 iron-sulfur cluster assembly accessory protein compare
ABZR88_RS15670 +0.9 6.5 endopeptidase La compare
ABZR88_RS01970 +0.9 2.1 YceI family protein compare
ABZR88_RS03280 +0.9 6.1 BatD family protein compare
ABZR88_RS21245 +0.9 3.1 hypothetical protein compare
ABZR88_RS13980 +0.9 3.3 tRNA guanosine(34) transglycosylase Tgt compare
ABZR88_RS17565 +0.9 6.6 glycosyltransferase family 4 protein compare
ABZR88_RS12500 +0.9 6.7 glycoside hydrolase family 31 protein compare
ABZR88_RS21475 +0.9 2.6 ABC transporter ATP-binding protein compare
ABZR88_RS12775 +0.9 4.5 glycosyltransferase compare
ABZR88_RS19530 +0.9 5.1 biosynthetic peptidoglycan transglycosylase compare
ABZR88_RS20090 +0.9 2.7 lysylphosphatidylglycerol synthase domain-containing protein compare
ABZR88_RS21935 +0.9 3.6 helix-turn-helix domain-containing protein compare
ABZR88_RS18910 +0.8 3.9 SRPBCC domain-containing protein compare
ABZR88_RS00940 +0.8 2.3 oxidoreductase compare
ABZR88_RS17465 +0.8 2.7 hypothetical protein compare
ABZR88_RS04270 +0.8 6.5 ribonuclease R compare
ABZR88_RS03305 +0.8 3.6 tetratricopeptide repeat protein compare
ABZR88_RS15760 +0.8 3.7 glutamate racemase compare
ABZR88_RS05630 +0.8 1.4 PAS domain-containing sensor histidine kinase compare
ABZR88_RS15535 +0.8 2.9 acyl transferase compare
ABZR88_RS19640 +0.8 1.1 hypothetical protein compare
ABZR88_RS00350 +0.8 1.3 hypothetical protein compare
ABZR88_RS04980 +0.8 6.1 amino acid permease compare
ABZR88_RS07830 +0.8 2.5 hypothetical protein compare
ABZR88_RS04310 +0.8 2.7 GtrA family protein compare
ABZR88_RS18520 +0.8 4.3 AraC family transcriptional regulator compare
ABZR88_RS01895 +0.8 1.5 four helix bundle protein compare
ABZR88_RS04275 +0.8 2.5 hypothetical protein compare
ABZR88_RS21625 +0.8 5.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABZR88_RS07945 +0.8 2.0 hypothetical protein compare
ABZR88_RS03290 +0.8 4.3 VWA domain-containing protein compare
ABZR88_RS01735 +0.8 5.2 hypothetical protein compare
ABZR88_RS17570 +0.8 3.9 glycosyltransferase family 4 protein compare
ABZR88_RS03740 +0.8 3.9 sensor histidine kinase KdpD compare
ABZR88_RS19010 +0.8 2.1 transcriptional regulator compare
ABZR88_RS03690 +0.8 1.0 SCO family protein compare
ABZR88_RS18230 +0.8 1.0 GNAT family N-acetyltransferase compare
ABZR88_RS17550 +0.8 6.1 glycosyltransferase family 4 protein compare
ABZR88_RS15465 +0.8 3.5 response regulator compare
ABZR88_RS06045 +0.7 1.2 HopJ type III effector protein compare
ABZR88_RS06590 +0.7 5.7 BlaI/MecI/CopY family transcriptional regulator compare
ABZR88_RS17595 +0.7 4.4 glycosyltransferase family 2 protein compare
ABZR88_RS15865 +0.7 2.8 MerR family transcriptional regulator compare
ABZR88_RS13820 +0.7 2.1 hypothetical protein compare
ABZR88_RS22150 +0.7 1.9 bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG compare
ABZR88_RS14130 +0.7 4.6 ABC transporter ATP-binding protein compare
ABZR88_RS03315 +0.7 1.5 hypothetical protein compare
ABZR88_RS03710 +0.7 2.0 DUF2461 domain-containing protein compare
ABZR88_RS17000 +0.7 0.7 hypothetical protein compare
ABZR88_RS17085 +0.7 3.9 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABZR88_RS00225 +0.7 5.0 RNA methyltransferase compare
ABZR88_RS06315 +0.7 3.8 YtxH domain-containing protein compare
ABZR88_RS10625 +0.7 0.9 Ig-like domain-containing protein compare
ABZR88_RS00730 +0.7 5.0 hypothetical protein compare
ABZR88_RS08440 +0.7 1.6 DUF5655 domain-containing protein compare
ABZR88_RS20695 +0.7 3.1 FecR family protein compare
ABZR88_RS22065 +0.7 1.0 regulatory iron-sulfur-containing complex subunit RicT compare
ABZR88_RS19620 +0.7 1.6 hypothetical protein compare
ABZR88_RS21705 +0.7 3.4 response regulator compare
ABZR88_RS21375 +0.7 1.3 SDR family oxidoreductase compare
ABZR88_RS01295 +0.7 1.8 hypothetical protein compare
ABZR88_RS01610 +0.7 2.0 ribonuclease III compare
ABZR88_RS22335 +0.7 3.6 Co2+/Mg2+ efflux protein ApaG compare
ABZR88_RS20460 +0.7 1.1 hypothetical protein compare
ABZR88_RS01345 +0.7 4.2 purine-nucleoside phosphorylase compare
ABZR88_RS13190 +0.7 1.1 hydroxypyruvate isomerase family protein compare
ABZR88_RS01950 +0.7 1.9 hypothetical protein compare
ABZR88_RS05050 +0.7 0.9 hypothetical protein compare
ABZR88_RS16195 +0.7 1.3 LysE family transporter compare
ABZR88_RS14340 +0.7 3.5 glycosyltransferase family 2 protein compare
ABZR88_RS01530 +0.7 2.4 polysaccharide deacetylase family protein compare
ABZR88_RS08850 +0.7 3.7 helix-turn-helix transcriptional regulator compare
ABZR88_RS04490 +0.7 2.9 L-glyceraldehyde 3-phosphate reductase compare
ABZR88_RS18245 +0.7 2.3 hypothetical protein compare
ABZR88_RS06380 +0.7 2.0 hypothetical protein compare
ABZR88_RS09165 +0.7 4.6 bifunctional nuclease family protein compare
ABZR88_RS00120 +0.6 1.5 type II toxin-antitoxin system RelE/ParE family toxin compare
ABZR88_RS09270 +0.6 2.8 STAS domain-containing protein compare
ABZR88_RS14915 +0.6 1.9 hypothetical protein compare
ABZR88_RS12745 +0.6 2.5 ATP-grasp domain-containing protein compare
ABZR88_RS17800 +0.6 2.2 tyrosine-type recombinase/integrase compare
ABZR88_RS18155 +0.6 3.0 adenylyl-sulfate kinase compare
ABZR88_RS17720 +0.6 1.8 hypothetical protein compare
ABZR88_RS12925 +0.6 2.8 FecR family protein compare
ABZR88_RS10435 +0.6 2.6 chemotaxis protein CheB compare
ABZR88_RS11105 +0.6 2.3 carbohydrate-binding family 9-like protein compare
ABZR88_RS17435 +0.6 3.3 RNA-binding S4 domain-containing protein compare
ABZR88_RS06520 +0.6 4.0 PA2169 family four-helix-bundle protein compare
ABZR88_RS19545 +0.6 2.2 hypothetical protein compare
ABZR88_RS21145 +0.6 3.8 ABC transporter ATP-binding protein compare
ABZR88_RS03790 +0.6 4.6 PspC domain-containing protein compare
ABZR88_RS01490 +0.6 3.2 SPW repeat protein compare
ABZR88_RS18565 +0.6 1.6 hypothetical protein compare
ABZR88_RS03575 +0.6 3.2 YitT family protein compare
ABZR88_RS01955 +0.6 1.6 helix-turn-helix domain-containing protein compare
ABZR88_RS17525 +0.6 3.7 tyrosine-protein kinase compare
ABZR88_RS13965 +0.6 1.8 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
ABZR88_RS18600 +0.6 2.9 helix-turn-helix transcriptional regulator compare
ABZR88_RS01440 +0.6 4.2 energy transducer TonB compare
ABZR88_RS17600 +0.6 4.4 hypothetical protein compare
ABZR88_RS08650 +0.6 2.3 response regulator transcription factor compare
ABZR88_RS14475 +0.6 1.1 hypothetical protein compare
ABZR88_RS00075 +0.6 1.9 RNA polymerase sigma factor compare
ABZR88_RS00805 +0.6 1.7 Nramp family divalent metal transporter compare
ABZR88_RS05660 +0.6 2.4 sensor histidine kinase compare
ABZR88_RS17365 +0.6 3.2 GIY-YIG nuclease family protein compare
ABZR88_RS15635 +0.6 2.6 SUKH-3 domain-containing protein compare
ABZR88_RS19005 +0.6 3.5 cell envelope integrity protein CreD compare
ABZR88_RS02460 +0.6 4.2 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Cellobiose in Mucilaginibacter yixingensis YX-36 DSM 26809

For carbon source D-Cellobiose across organisms