Experiment set5IT078 for Pseudomonas fluorescens FW300-N2C3

Compare to:

D-Glucosamine Hydrochloride carbon source

200 most important genes:

  gene name fitness t score description  
AO356_17545 -6.2 -4.3 iron dicitrate transport regulator FecR compare
AO356_13405 -6.0 -7.1 methionine biosynthesis protein MetW compare
AO356_21440 -5.7 -6.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_12525 -5.6 -5.4 acetylglutamate kinase compare
AO356_08635 -5.4 -6.5 ATP phosphoribosyltransferase regulatory subunit compare
AO356_14435 -5.4 -5.3 anthranilate phosphoribosyltransferase compare
AO356_21405 -5.4 -5.2 3-isopropylmalate dehydratase compare
AO356_21415 -5.3 -9.6 3-isopropylmalate dehydrogenase compare
AO356_18325 -5.3 -10.2 argininosuccinate synthase compare
AO356_09815 -5.3 -6.2 imidazoleglycerol-phosphate dehydratase compare
AO356_13410 -5.2 -10.6 homoserine O-acetyltransferase compare
AO356_09810 -5.1 -3.5 imidazole glycerol phosphate synthase subunit HisH compare
AO356_10915 -5.1 -9.2 tryptophan synthase subunit beta compare
AO356_13250 -5.0 -8.4 dihydroxy-acid dehydratase compare
AO356_13085 -5.0 -10.2 N-acetylglutamate synthase compare
AO356_09520 -5.0 -4.8 phosphoribosyl-AMP cyclohydrolase compare
AO356_06965 -5.0 -5.9 histidinol dehydrogenase compare
AO356_19090 -4.9 -3.4 phosphoribosylaminoimidazole synthetase compare
AO356_24845 -4.9 -4.7 ATPase compare
AO356_12025 -4.8 -15.7 pyruvate carboxylase subunit B compare
AO356_16175 -4.8 -5.7 acetolactate synthase 3 regulatory subunit compare
AO356_22200 -4.8 -7.3 sirohydrochlorin ferrochelatase compare
AO356_00450 -4.8 -7.2 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) conserved
AO356_00475 -4.8 -7.9 ABC transporter for D-Glucosamine, permease component 2 (from data) conserved
AO356_12020 -4.7 -13.6 pyruvate carboxylase subunit A compare
AO356_09375 -4.7 -24.4 glutamate synthase compare
AO356_09370 -4.7 -14.6 glutamate synthase compare
AO356_18275 -4.7 -12.9 ornithine carbamoyltransferase compare
AO356_14420 -4.7 -13.5 anthranilate synthase compare
AO356_10910 -4.7 -8.4 tryptophan synthase subunit alpha compare
AO356_16180 -4.7 -14.9 ketol-acid reductoisomerase compare
AO356_08905 -4.6 -4.5 glycosyl transferase compare
AO356_00555 -4.6 -10.6 sulfite reductase compare
AO356_06970 -4.6 -8.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_09800 -4.6 -4.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_28445 -4.5 -3.9 decarboxylase compare
AO356_12520 -4.5 -3.1 orotate phosphoribosyltransferase compare
AO356_07050 -4.4 -10.7 glmZ(sRNA)-inactivating NTPase compare
AO356_09525 -4.4 -7.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_00480 -4.3 -10.0 ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data) conserved
AO356_21465 -4.3 -5.8 amidophosphoribosyltransferase compare
AO356_16075 -4.3 -2.9 Fis family transcriptional regulator compare
AO356_23155 -4.2 -10.8 RpiR family transcriptional regulator compare
AO356_13605 -4.2 -8.0 5,10-methylenetetrahydrofolate reductase compare
AO356_20830 -4.1 -4.8 phosphoadenosine phosphosulfate reductase compare
AO356_06550 -4.1 -11.7 2-isopropylmalate synthase compare
AO356_14440 -4.1 -4.6 indole-3-glycerol-phosphate synthase compare
AO356_16170 -4.0 -11.4 acetolactate synthase 3 catalytic subunit compare
AO356_21400 -4.0 -5.7 isopropylmalate isomerase compare
AO356_21470 -3.9 -7.1 O-succinylhomoserine sulfhydrylase compare
AO356_19795 -3.9 -2.7 glycerol-3-phosphate dehydrogenase compare
AO356_02580 -3.9 -5.2 GntR family transcriptional regulator compare
AO356_03810 -3.8 -6.3 anti-anti-sigma factor compare
AO356_15165 -3.7 -3.6 protein cII compare
AO356_18025 -3.7 -3.6 ATP-dependent DNA helicase RuvB compare
AO356_20475 -3.7 -3.6 hypothetical protein compare
AO356_00560 -3.6 -3.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_10300 -3.6 -5.4 3-phosphoglycerate dehydrogenase compare
AO356_00880 -3.6 -3.0 integration host factor subunit alpha compare
AO356_03435 -3.5 -4.2 integration host factor subunit beta compare
AO356_08895 -3.4 -2.3 GlcNAc-PI de-N-acetylase compare
AO356_14295 -3.4 -2.3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO356_12780 -3.4 -7.1 argininosuccinate lyase compare
AO356_12515 -3.4 -3.3 exodeoxyribonuclease III compare
AO356_09795 -3.3 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
AO356_22795 -3.3 -5.7 UTP--glucose-1-phosphate uridylyltransferase compare
AO356_08735 -3.3 -13.7 phosphoserine phosphatase compare
AO356_10340 -3.3 -14.8 phosphoserine phosphatase compare
AO356_16050 -3.2 -3.1 glucose-6-phosphate isomerase compare
AO356_00470 -3.1 -5.0 ABC transporter for D-Glucosamine, permease component 1 (from data) compare
AO356_28025 -3.1 -7.8 aldehyde dehydrogenase compare
AO356_04560 -3.0 -2.9 serine peptidase compare
AO356_17520 -2.9 -2.8 phosphoribosylformylglycinamidine synthase compare
AO356_01750 -2.9 -3.9 ATP-dependent Clp protease proteolytic subunit compare
AO356_14135 -2.9 -15.5 biotin synthase compare
AO356_10000 -2.8 -6.2 hypothetical protein compare
AO356_01745 -2.8 -5.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_19085 -2.8 -9.0 phosphoribosylglycinamide formyltransferase compare
AO356_12015 -2.8 -9.4 LysR family transcriptional regulator compare
AO356_16665 -2.7 -13.7 sulfate adenylyltransferase compare
AO356_12380 -2.6 -8.8 ATP-dependent DNA helicase RecG compare
AO356_01555 -2.6 -9.7 acyl-CoA dehydrogenase compare
AO356_07480 -2.6 -3.5 carbamoyl phosphate synthase large subunit compare
AO356_30345 -2.6 -6.7 IclR family transcriptional regulator compare
AO356_10075 -2.6 -7.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO356_03365 -2.5 -5.3 UDP-N-acetylglucosamine 2-epimerase compare
AO356_08890 -2.5 -8.9 glycosyltransferase compare
AO356_07055 -2.5 -4.0 phosphocarrier protein HPr compare
AO356_18020 -2.5 -4.0 ATP-dependent DNA helicase RuvA compare
AO356_03350 -2.5 -8.2 glycosyl transferase compare
AO356_12375 -2.4 -12.7 histidine kinase compare
AO356_06005 -2.4 -4.4 zinc metallopeptidase RseP compare
AO356_28110 -2.4 -9.2 ATPase compare
AO356_15815 -2.4 -2.1 gamma-glutamyl kinase compare
AO356_08235 -2.4 -9.2 histidine kinase compare
AO356_03355 -2.3 -5.1 hypothetical protein compare
AO356_02315 -2.3 -5.2 DNA topoisomerase I compare
AO356_26360 -2.3 -2.7 enoyl-CoA hydratase compare
AO356_00455 -2.3 -3.0 IclR family transcriptional regulator compare
AO356_07915 -2.3 -2.7 exodeoxyribonuclease V subunit beta compare
AO356_09540 -2.3 -2.6 twin-arginine protein translocation system subunit TatC compare
AO356_07910 -2.3 -2.1 exodeoxyribonuclease V subunit alpha compare
AO356_16670 -2.3 -10.0 adenylylsulfate kinase compare
AO356_21330 -2.3 -10.5 aromatic amino acid aminotransferase compare
AO356_14430 -2.3 -6.0 anthranilate synthase compare
AO356_17970 -2.2 -15.6 porin compare
AO356_12895 -2.2 -17.0 polyphosphate kinase compare
AO356_10005 -2.2 -11.3 branched-chain amino acid permease (azaleucine resistance) compare
AO356_03415 -2.1 -9.9 oxidoreductase compare
AO356_21275 -2.1 -2.9 peptidase compare
AO356_11315 -2.1 -2.0 shikimate dehydrogenase compare
AO356_17070 -2.1 -3.5 cytochrome B compare
AO356_27180 -2.0 -4.8 hypothetical protein compare
AO356_11850 -2.0 -12.9 glycosyltransferase compare
AO356_03345 -2.0 -9.7 hypothetical protein compare
AO356_26645 -1.9 -3.0 crotonase compare
AO356_11845 -1.9 -13.1 glycosyltransferase compare
AO356_17950 -1.9 -8.3 histidine kinase compare
AO356_14220 -1.9 -11.7 pyrroloquinoline quinone biosynthesis protein PqqF compare
AO356_19925 -1.9 -8.0 AsnC family transcriptional regulator compare
AO356_10345 -1.8 -6.0 RNA pyrophosphohydrolase compare
AO356_03070 -1.8 -10.1 histidine kinase compare
AO356_02325 -1.8 -2.1 3-ketoacyl-CoA thiolase compare
AO356_16080 -1.8 -9.1 ATPase compare
AO356_03800 -1.8 -2.6 histidine kinase compare
AO356_19900 -1.8 -7.7 lysine transporter LysE compare
AO356_18730 -1.7 -8.5 arginine N-succinyltransferase compare
AO356_19425 -1.7 -1.9 lipid A biosynthesis lauroyl acyltransferase compare
AO356_15520 -1.7 -2.4 AsnC family transcriptional regulator compare
AO356_17985 -1.7 -5.1 cold-shock protein compare
AO356_06385 -1.7 -3.3 recombinase XerD compare
AO356_07005 -1.7 -2.2 ABC transporter ATP-binding protein compare
AO356_03360 -1.6 -3.6 hypothetical protein compare
AO356_10350 -1.6 -10.4 phosphoenolpyruvate-protein phosphotransferase compare
AO356_21435 -1.6 -4.8 pseudouridine synthase compare
AO356_08470 -1.6 -10.9 N-acylglucosamine 2-epimerase compare
AO356_11610 -1.6 -2.8 glycerol acyltransferase compare
AO356_08870 -1.6 -8.6 polymerase compare
AO356_02190 -1.6 -6.4 hypothetical protein compare
AO356_02860 -1.6 -2.9 histidine kinase compare
AO356_03400 -1.6 -5.7 aminotransferase DegT compare
AO356_10185 -1.6 -7.2 glutamate--cysteine ligase compare
AO356_10585 -1.6 -9.9 hypothetical protein compare
AO356_18245 -1.6 -6.0 DeoR family transcriptional regulator compare
AO356_07000 -1.6 -2.8 ABC transporter permease compare
AO356_11820 -1.6 -6.3 sugar ABC transporter ATP-binding protein compare
AO356_16095 -1.5 -6.8 molecular chaperone DnaK compare
AO356_08670 -1.5 -1.9 N-acetylmuramoyl-L-alanine amidase compare
AO356_06995 -1.5 -5.3 outer membrane lipid asymmetry maintenance protein MlaD compare
AO356_03420 -1.5 -7.4 UDP-N-acetyl-D-glucosamine dehydrogenase compare
AO356_07195 -1.4 -5.9 GntR family transcriptional regulator compare
AO356_24245 -1.4 -2.9 siderophore-iron reductase FhuF compare
AO356_08930 -1.4 -2.7 heptose kinase compare
AO356_20175 -1.4 -1.6 3-oxoacyl-ACP synthase compare
AO356_10330 -1.4 -9.7 threonine dehydratase compare
AO356_08610 -1.4 -6.7 exoribonuclease R compare
AO356_17830 -1.4 -4.9 pyruvate kinase compare
AO356_03405 -1.4 -3.5 serine acetyltransferase compare
AO356_05225 -1.4 -4.0 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_06990 -1.4 -4.2 toluene tolerance protein compare
AO356_12725 -1.3 -4.2 recombinase XerC compare
AO356_16875 -1.3 -8.6 GntR family transcriptional regulator compare
AO356_11465 -1.3 -7.2 DNA polymerase I compare
AO356_06960 -1.3 -5.2 histidinol-phosphate aminotransferase compare
AO356_05670 -1.3 -2.6 recombinase RecA compare
AO356_27215 -1.3 -3.3 hypothetical protein compare
AO356_27250 -1.3 -5.5 hypothetical protein compare
AO356_00485 -1.3 -4.7 hypothetical protein compare
AO356_19050 -1.2 -2.2 cysteine synthase compare
AO356_05010 -1.2 -7.2 diguanylate cyclase compare
AO356_18890 -1.2 -3.4 flagellar biosynthesis protein FlgN compare
AO356_27205 -1.2 -5.4 hypothetical protein compare
AO356_22870 -1.2 -3.0 glycerate kinase compare
AO356_00575 -1.2 -2.2 SCP-2 family sterol carrier protein compare
AO356_11410 -1.2 -2.2 hypothetical protein compare
AO356_11085 -1.2 -5.5 LysR family transcriptional regulator compare
AO356_19335 -1.1 -7.8 peptidase S41 compare
AO356_07110 -1.1 -4.5 ribonuclease G compare
AO356_11585 -1.1 -4.0 lipid A biosynthesis lauroyl acyltransferase compare
AO356_19060 -1.1 -8.6 (p)ppGpp synthetase compare
AO356_11675 -1.1 -6.1 chromosome partitioning protein compare
AO356_20805 -1.1 -5.1 HAD family hydrolase conserved
AO356_26350 -1.1 -1.8 acetyl-CoA acetyltransferase compare
AO356_17020 -1.1 -3.4 cytochrome D ubiquinol oxidase subunit III compare
AO356_06325 -1.1 -1.7 plasmid stabilization protein ParE compare
AO356_05995 -1.1 -2.4 hypothetical protein compare
AO356_12730 -1.1 -2.9 hypothetical protein compare
AO356_11680 -1.1 -1.9 chromosome partitioning protein ParB compare
AO356_12735 -1.0 -2.0 diaminopimelate epimerase compare
AO356_11400 -1.0 -5.7 glutamate:protein symporter compare
AO356_12625 -1.0 -2.7 cytochrome C2 compare
AO356_21410 -1.0 -3.7 SAM-dependent methyltransferase compare
AO356_08875 -1.0 -1.8 toluene tolerance protein compare
AO356_05055 -1.0 -3.9 permease DsdX compare
AO356_27210 -1.0 -4.3 hypothetical protein compare
AO356_01590 -1.0 -3.6 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) compare
AO356_11825 -1.0 -4.0 ABC transporter compare
AO356_04575 -1.0 -5.7 RNA polymerase subunit sigma compare
AO356_03380 -1.0 -4.1 glycosyl amidation-associated protein WbuZ compare
AO356_08955 -1.0 -5.3 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source D-Glucosamine Hydrochloride in Pseudomonas fluorescens FW300-N2C3

For carbon source D-Glucosamine Hydrochloride across organisms