Experiment set5IT064 for Pseudomonas syringae pv. syringae B728a

Compare to:

epiphytic; Lima bean

200 most important genes:

  gene name fitness t score description  
Psyr_4581 -5.9 -2.9 anthranilate synthase, component II compare
Psyr_1984 -5.7 -3.6 3-isopropylmalate dehydratase, small subunit compare
Psyr_0557 -5.5 -3.8 phosphoserine phosphatase compare
Psyr_3135 -4.9 -2.7 transcriptional regulator, GntR family compare
Psyr_2312 -4.9 -1.4 Protein of unknown function DUF24 compare
Psyr_1408 -4.9 -3.3 Holliday junction endonuclease RuvC compare
Psyr_4609 -4.8 -13.9 anthranilate synthase, component I compare
Psyr_1985 -4.8 -3.3 3-isopropylmalate dehydrogenase compare
Psyr_3673 -4.8 -2.6 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_4852 -4.6 -7.6 D-3-phosphoglycerate dehydrogenase compare
Psyr_1269 -4.6 -3.1 phosphoribosylformylglycinamidine synthase compare
Psyr_1663 -4.5 -6.2 phosphoribosylanthranilate isomerase compare
Psyr_0025 -4.4 -5.3 shikimate dehydrogenase compare
Psyr_1983 -4.4 -7.1 3-isopropylmalate dehydratase, large subunit compare
Psyr_4362 -4.3 -3.0 Rare lipoprotein A compare
Psyr_4270 -4.3 -9.0 serine hydroxymethyltransferase compare
Psyr_1212 -4.2 -3.3 type III secretion protein HrpO compare
Psyr_0469 -4.2 -10.8 dihydroxyacid dehydratase compare
Psyr_0474 -4.2 -10.9 homoserine O-acetyltransferase compare
Psyr_3028 -4.0 -3.0 Protein of unknown function DUF28 compare
Psyr_0846 -4.0 -13.4 acetolactate synthase, large subunit compare
Psyr_0917 -3.9 -13.6 ABC-2 compare
Psyr_4018 -3.9 -10.9 Formyltetrahydrofolate deformylase compare
Psyr_1668 -3.9 -6.9 amidophosphoribosyltransferase compare
Psyr_4369 -3.8 -5.8 glutamate-5-semialdehyde dehydrogenase compare
Psyr_4580 -3.8 -4.8 anthranilate phosphoribosyltransferase compare
Psyr_2462 -3.8 -5.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1669 -3.8 -9.7 O-succinylhomoserine sulfhydrylase compare
Psyr_0918 -3.6 -14.9 ABC transporter compare
Psyr_0412 -3.6 -13.4 glutamate synthase (NADPH) small subunit compare
Psyr_0704 -3.6 -9.0 glutamate 5-kinase compare
Psyr_1424 -3.6 -2.2 Peptidase S24, S26A and S26B compare
Psyr_3293 -3.6 -2.4 UspA compare
Psyr_0033 -3.5 -3.4 tryptophan synthase, alpha chain compare
Psyr_0473 -3.5 -6.5 Methionine biosynthesis MetW compare
Psyr_2980 -3.4 -4.6 UDP-glucose pyrophosphorylase compare
Psyr_0411 -3.4 -18.3 glutamate synthase (NADPH) large subunit compare
Psyr_0847 -3.3 -6.7 acetolactate synthase, small subunit compare
Psyr_0529 -3.3 -7.6 Glycosyl transferase, group 1 compare
Psyr_3174 -3.2 -5.1 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_3202 -3.2 -2.2 NADH dehydrogenase subunit G compare
Psyr_0034 -3.1 -5.9 tryptophan synthase, beta chain compare
Psyr_4686 -3.0 -7.3 8-amino-7-oxononanoate synthase compare
Psyr_1257 -2.9 -10.4 2-isopropylmalate synthase compare
Psyr_0454 -2.8 -6.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1251 -2.8 -4.5 quinoprotein compare
Psyr_4116 -2.8 -2.0 Transport-associated protein compare
Psyr_4897 -2.7 -3.3 imidazoleglycerol-phosphate dehydratase compare
Psyr_0377 -2.7 -8.9 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_3005 -2.7 -1.3 3-oxoadipate enol-lactonase compare
Psyr_4894 -2.7 -4.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_5029 -2.7 -2.0 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_0826 -2.7 -8.0 glucose-6-phosphate isomerase compare
Psyr_2251 -2.7 -2.0 Phosphonate metabolism PhnG compare
Psyr_0487 -2.7 -3.7 glutathione synthase compare
Psyr_5133 -2.7 -5.8 tRNA modification GTPase trmE compare
Psyr_0386 -2.7 -5.6 phosphoribosyl-AMP cyclohydrolase compare
Psyr_1528 -2.6 -3.5 Arc-like DNA binding protein compare
Psyr_4194 -2.6 -5.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_2077 -2.6 -4.5 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4408 -2.5 -8.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_1914 -2.5 -8.6 transaldolase compare
Psyr_2014 -2.5 -3.8 conserved hypothetical protein compare
Psyr_0848 -2.5 -6.6 ketol-acid reductoisomerase compare
Psyr_1247 -2.5 -2.7 conserved hypothetical protein compare
Psyr_2223 -2.4 -1.9 sarcosine oxidase, delta subunit compare
Psyr_0531 -2.4 -2.4 LmbE-like protein compare
Psyr_4407 -2.4 -2.4 phosphoribosylamine--glycine ligase compare
Psyr_4887 -2.4 -7.5 Peptidase S41A, C-terminal protease compare
Psyr_4687 -2.4 -7.9 biotin synthase compare
Psyr_0378 -2.4 -8.6 Glycosyl transferase, family 2 compare
Psyr_4087 -2.3 -1.6 Protein of unknown function DUF520 compare
Psyr_3688 -2.3 -2.3 conserved hypothetical protein compare
Psyr_4683 -2.3 -4.8 dethiobiotin synthase compare
Psyr_2266 -2.3 -2.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3020 -2.3 -1.7 precorrin-4 C11-methyltransferase compare
Psyr_1277 -2.3 -1.7 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_4134 -2.2 -7.0 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_2073 -2.2 -3.6 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_2348 -2.2 -2.8 hypothetical protein compare
Psyr_4893 -2.2 -1.3 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3008 -2.1 -5.8 Undecaprenyl-diphosphatase compare
Psyr_0385 -2.1 -3.0 phosphoribosyl-ATP pyrophosphatase compare
Psyr_4089 -2.1 -6.1 PAS compare
Psyr_0947 -2.1 -5.7 TPR repeat protein:TPR repeat protein compare
Psyr_1148 -2.1 -3.8 branched chain amino acid aminotransferase apoenzyme compare
Psyr_4567 -2.1 -3.9 Protein of unknown function UPF0075 compare
Psyr_0827 -2.1 -2.6 pantothenate synthetase compare
Psyr_2253 -2.1 -2.4 Phosphonate metabolism compare
Psyr_2461 -2.1 -2.0 Uncharacterized conserved protein UCP030820 compare
Psyr_4788 -2.1 -1.5 lipoprotein, putative compare
Psyr_4132 -2.1 -5.3 histidinol phosphate aminotransferase apoenzyme compare
Psyr_3107 -2.0 -2.4 conserved hypothetical protein compare
Psyr_3286 -2.0 -6.3 conserved hypothetical protein compare
Psyr_4940 -2.0 -2.1 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_1227 -2.0 -3.3 Queuosine biosynthesis protein compare
Psyr_4341 -1.9 -6.6 thiamine-phosphate diphosphorylase compare
Psyr_1410 -1.9 -4.1 Holliday junction DNA helicase RuvB compare
Psyr_3693 -1.9 -3.4 conserved hypothetical protein compare
Psyr_4896 -1.9 -5.4 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_4128 -1.9 -5.8 sulfate adenylyltransferase subunit 2 compare
Psyr_0268 -1.9 -2.4 DSBA oxidoreductase compare
Psyr_1108 -1.9 -6.3 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_4684 -1.8 -2.4 biotin synthesis protein BioC compare
Psyr_4019 -1.8 -2.8 H-NS family protein MvaT compare
Psyr_3284 -1.8 -2.2 SOS cell division inhibitor SulA compare
Psyr_0208 -1.8 -3.5 endoribonuclease L-PSP compare
Psyr_2386 -1.8 -2.4 hypothetical protein compare
Psyr_3133 -1.8 -1.5 Amidohydrolase 2 compare
Psyr_2117 -1.8 -1.7 conserved hypothetical protein compare
Psyr_1614 -1.8 -3.0 lipid A biosynthesis acyltransferase compare
Psyr_1544 -1.8 -3.3 SirA-like protein compare
Psyr_4141 -1.8 -4.0 ABC transporter compare
Psyr_3193 -1.7 -2.1 Transcription factor jumonji, jmjC compare
Psyr_4417 -1.7 -1.5 Ferredoxin--nitrite reductase compare
Psyr_4627 -1.7 -2.0 dimethyladenosine transferase compare
Psyr_4991 -1.7 -2.5 hypothetical protein compare
Psyr_3581 -1.7 -3.9 ribosomal large subunit pseudouridine synthase B compare
Psyr_4133 -1.7 -6.7 histidinol dehydrogenase compare
Psyr_1378 -1.7 -1.8 RecA protein compare
Psyr_3555 -1.7 -1.6 aspartate kinase compare
Psyr_1401 -1.7 -3.7 Histidine triad (HIT) protein compare
Psyr_1418 -1.7 -2.8 Radical SAM compare
Psyr_1973 -1.6 -1.4 Aspartate transaminase compare
Psyr_2456 -1.6 -2.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_4512 -1.6 -4.4 putative phage-related protein compare
Psyr_3055 -1.6 -1.8 Aminoglycoside phosphotransferase compare
Psyr_1748 -1.6 -3.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0724 -1.6 -2.0 conserved hypothetical protein compare
Psyr_4203 -1.6 -1.7 SsrA-binding protein compare
Psyr_2151 -1.6 -1.4 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_4693 -1.6 -3.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5135 -1.6 -1.2 Protein of unknown function DUF37 compare
Psyr_2471 -1.6 -2.5 hydroxymethylglutaryl-CoA lyase compare
Psyr_2573 -1.6 -1.3 transcriptional regulator, DeoR family compare
Psyr_0983 -1.6 -4.6 Protein of unknown function DUF159 compare
Psyr_1109 -1.6 -4.7 6-phosphogluconate dehydratase compare
Psyr_4844 -1.6 -4.8 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_1111 -1.5 -1.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3287 -1.5 -2.0 DNA topoisomerase I compare
Psyr_1955 -1.5 -2.3 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_1373 -1.5 -2.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3014 -1.5 -2.2 protoporphyrin IX magnesium-chelatase compare
Psyr_2196 -1.5 -1.5 Urease accessory protein UreG compare
Psyr_1613 -1.5 -2.6 septum site-determining protein MinC compare
Psyr_1588 -1.5 -2.1 Putative exonuclease, RdgC compare
Psyr_3179 -1.5 -1.9 DNA translocase FtsK compare
Psyr_1725 -1.5 -2.3 Protein of unknown function DUF204 compare
Psyr_3111 -1.5 -3.4 transcriptional regulator, LysR family compare
Psyr_4126 -1.5 -5.9 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_2612 -1.4 -2.2 syrP protein, putative compare
Psyr_0525 -1.4 -2.9 Lipopolysaccharide kinase compare
Psyr_4736 -1.4 -1.8 conserved hypothetical protein compare
Psyr_3255 -1.4 -1.8 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_2929 -1.4 -1.9 transcriptional regulator, LysR family compare
Psyr_1120 -1.4 -4.2 glucose-6-phosphate 1-dehydrogenase compare
Psyr_4622 -1.4 -2.5 Nucleotidyl transferase compare
Psyr_5132 -1.4 -2.1 Glucose-inhibited division protein A subfamily compare
Psyr_1953 -1.4 -1.4 conserved hypothetical protein compare
Psyr_3495 -1.4 -4.2 ATP-binding region, ATPase-like protein compare
Psyr_3618 -1.4 -1.2 Catalytic LigB subunit of aromatic ring-opening dioxygenase compare
Psyr_3932 -1.4 -1.8 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_3563 -1.4 -3.9 arginine succinyltransferase compare
Psyr_4445 -1.4 -3.1 conserved hypothetical protein compare
Psyr_2171 -1.4 -1.7 HpcH/HpaI aldolase compare
Psyr_4491 -1.4 -2.0 Deoxyribose-phosphate aldolase compare
Psyr_3638 -1.4 -2.3 UDP-glucose 4-epimerase, putative compare
Psyr_3121 -1.4 -1.9 Protein of unknown function DUF1345 compare
Psyr_1121 -1.4 -1.2 6-phosphogluconolactonase compare
Psyr_4463 -1.4 -2.0 Protein of unknown function DUF193 compare
Psyr_2071 -1.4 -1.6 outer membrane lipoprotein OprI compare
Psyr_0383 -1.3 -1.1 Twin-arginine translocation protein TatB compare
Psyr_4822 -1.3 -2.2 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0811 -1.3 -4.2 Integral membrane protein TerC compare
Psyr_4140 -1.3 -2.2 Protein of unknown function DUF140 compare
Psyr_2344 -1.3 -2.8 CDS compare
Psyr_2973 -1.3 -1.6 Glyoxalase I compare
Psyr_0951 -1.3 -2.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0255 -1.3 -1.4 glutamate-cysteine ligase compare
Psyr_1638 -1.3 -1.8 RNAse E compare
Psyr_2419 -1.3 -2.3 Protein of unknown function DUF480 compare
Psyr_2030 -1.3 -2.1 Calcium-binding EF-hand compare
Psyr_1341 -1.3 -7.1 Protein-P-II uridylyltransferase compare
Psyr_0184 -1.3 -1.4 Protein of unknown function DUF484 compare
Psyr_3637 -1.3 -6.5 Glycosyl transferase, family 4 compare
Psyr_1678 -1.3 -1.0 Hypothetical protein compare
Psyr_3290 -1.3 -2.2 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1419 -1.3 -2.1 preQ(0) biosynthesis protein QueC compare
Psyr_1910 -1.2 -3.2 VacJ-like lipoprotein compare
Psyr_2617 -1.2 -1.4 Secretion protein HlyD compare
Psyr_0923 -1.2 -3.1 hypothetical protein compare
Psyr_3208 -1.2 -1.2 NADH dehydrogenase subunit M compare
Psyr_3552 -1.2 -2.1 Divalent cation transporter compare
Psyr_4843 -1.2 -4.2 NUDIX hydrolase compare
Psyr_1952 -1.2 -2.4 hypothetical protein compare
Psyr_2076 -1.2 -2.5 UspA compare
Psyr_4418 -1.2 -1.1 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_0815 -1.2 -3.5 nicotinate-nucleotide pyrophosphorylase (carboxylating) compare
Psyr_2225 -1.2 -1.5 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) compare
Psyr_1645 -1.2 -2.1 phosphate:acyl-[acyl carrier protein] acyltransferase compare


Specific Phenotypes

For 1 genes in this experiment