Experiment set5IT034 for Methanococcus maripaludis S2

Compare to:

H2 deepwell acetate and casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03615 +3.2 24.4 4Fe-4S binding protein compare
MMP_RS03620 +2.8 17.0 hypothetical protein compare
MMP_RS04550 +2.2 16.6 S-layer protein compare
MMP_RS08855 +2.0 9.1 hypothetical protein compare
MMP_RS01310 +2.0 13.3 hypothetical protein compare
MMP_RS00240 +1.9 13.4 type II secretion system F family protein compare
MMP_RS01305 +1.6 12.1 hypothetical protein compare
MMP_RS08860 +1.6 6.8 MinD/ParA family protein compare
MMP_RS01290 +1.6 9.7 class III signal peptide-containing protein compare
MMP_RS00245 +1.6 13.0 type II secretion system F family protein compare
MMP_RS01285 +1.5 8.3 hypothetical protein compare
MMP_RS01280 +1.5 9.6 DUF515 domain-containing protein compare
MMP_RS01295 +1.5 6.9 hypothetical protein compare
MMP_RS00250 +1.5 9.4 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01270 +1.4 8.6 prepilin peptidase compare
MMP_RS01315 +1.3 10.1 DUF2341 domain-containing protein compare
MMP_RS07860 +1.3 1.0 hypothetical protein compare
MMP_RS06840 +1.3 1.5 DNA-directed RNA polymerase subunit N compare
MMP_RS03090 +1.3 4.6 cation:proton antiporter compare
MMP_RS03125 +1.2 2.7 cell division ATPase MinD compare
MMP_RS04520 +1.2 1.9 nucleoside deaminase compare
MMP_RS05635 +1.2 6.7 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS09045 +1.1 7.3 class III signal peptide-containing protein compare
MMP_RS07330 +1.1 9.0 membrane protein compare
MMP_RS06905 +1.1 2.2 hypothetical protein compare
MMP_RS07130 +1.1 5.7 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS01370 +1.0 5.1 acetate--CoA ligase family protein compare
MMP_RS09025 +1.0 1.2 hypothetical protein compare
MMP_RS07125 +0.9 1.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08675 +0.9 2.3 class III signal peptide-containing protein compare
MMP_RS07120 +0.9 3.6 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS04985 +0.9 2.0 DUF2180 family protein compare
MMP_RS06070 +0.9 5.0 iron ABC transporter substrate-binding protein compare
MMP_RS08665 +0.8 6.0 hypothetical protein compare
MMP_RS00140 +0.8 2.2 DUF192 domain-containing protein compare
MMP_RS03965 +0.8 2.0 hypothetical protein compare
MMP_RS00990 +0.8 2.8 hypothetical protein compare
MMP_RS07840 +0.8 2.4 ribonuclease III compare
MMP_RS06590 +0.8 1.9 GNAT family N-acetyltransferase compare
MMP_RS06175 +0.8 3.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS06745 +0.8 3.5 DUF2119 domain-containing protein compare
MMP_RS05865 +0.8 2.9 hypothetical protein compare
MMP_RS06520 +0.8 2.6 DUF1786 domain-containing protein compare
MMP_RS08775 +0.8 3.0 methanogenesis marker 9 domain-containing protein compare
MMP_RS09030 +0.8 2.6 hypothetical protein compare
MMP_RS08315 +0.7 1.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS06540 +0.7 1.8 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS01300 +0.7 4.2 hypothetical protein compare
MMP_RS09055 +0.7 0.7 CAP domain-containing protein compare
MMP_RS06550 +0.7 3.8 AMP-binding protein compare
MMP_RS05965 +0.7 2.6 carboxymuconolactone decarboxylase family protein compare
MMP_RS03625 +0.7 4.0 cell wall-binding protein compare
MMP_RS03300 +0.7 0.7 TOBE domain-containing protein compare
MMP_RS08430 +0.7 2.2 HAD family hydrolase compare
MMP_RS01165 +0.7 1.7 DUF434 domain-containing protein compare
MMP_RS01750 +0.7 3.8 DUF63 family protein compare
MMP_RS06035 +0.7 3.2 glycosyltransferase family 2 protein compare
MMP_RS02490 +0.7 1.5 hypothetical protein compare
MMP_RS06910 +0.7 3.7 RlmF-related methyltransferase compare
MMP_RS01275 +0.7 3.1 class III signal peptide-containing protein compare
MMP_RS07770 +0.7 2.7 alanine racemase compare
MMP_RS08750 +0.7 2.4 hypothetical protein compare
MMP_RS02545 +0.7 2.5 hypothetical protein compare
MMP_RS05825 +0.6 1.5 peptidyl-prolyl cis-trans isomerase compare
MMP_RS05785 +0.6 3.9 ATP-binding protein compare
MMP_RS06365 +0.6 1.5 hypothetical protein compare
MMP_RS08275 +0.6 2.9 hypothetical protein compare
MMP_RS08850 +0.6 3.9 hypothetical protein compare
MMP_RS02915 +0.6 1.7 amino acid ABC transporter permease compare
MMP_RS06715 +0.6 2.7 cache domain-containing protein compare
MMP_RS05910 +0.6 1.2 cell division ATPase MinD compare
MMP_RS00335 +0.6 1.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS06610 +0.6 1.3 DUF2334 domain-containing protein compare
MMP_RS07815 +0.6 0.8 DUF2120 domain-containing protein compare
MMP_RS02700 +0.6 2.8 formylmethanofuran dehydrogenase subunit C compare
MMP_RS04020 +0.6 1.9 hypothetical protein compare
MMP_RS06500 +0.6 2.3 ATP-binding protein compare
MMP_RS06870 +0.6 0.9 DedA family protein compare
MMP_RS03065 +0.6 1.2 AzlC family ABC transporter permease compare
MMP_RS06710 +0.5 1.4 selenium-binding protein compare
MMP_RS07135 +0.5 2.7 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08620 +0.5 1.4 flagellar accessory protein FlaH compare
MMP_RS02765 +0.5 1.5 ABC transporter ATP-binding protein compare
MMP_RS06720 +0.5 1.7 response regulator transcription factor compare
MMP_RS00660 +0.5 2.7 alkaline phosphatase family protein compare
MMP_RS06760 +0.5 1.4 hypothetical protein compare
MMP_RS06225 +0.5 1.7 DNA double-strand break repair nuclease NurA compare
MMP_RS00535 +0.5 1.1 TIGR00375 family protein compare
MMP_RS06460 +0.5 1.4 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS08130 +0.5 2.3 IGHMBP2 family helicase compare
MMP_RS07650 +0.5 2.5 TldD/PmbA family protein compare
MMP_RS07915 +0.5 2.1 DUF4870 domain-containing protein compare
MMP_RS07180 +0.5 2.5 DEAD/DEAH box helicase compare
MMP_RS05675 +0.5 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS02815 +0.5 1.2 hypothetical protein compare
MMP_RS00905 +0.5 1.1 phenylacetate--CoA ligase compare
MMP_RS03150 +0.5 2.0 phosphoglycerate mutase compare
MMP_RS06530 +0.5 1.3 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS06765 +0.5 2.4 flap endonuclease-1 compare
MMP_RS01130 +0.5 2.5 flavoprotein compare
MMP_RS08475 +0.5 2.0 ABC transporter permease compare
MMP_RS05715 +0.5 1.5 hypothetical protein compare
MMP_RS02470 +0.5 0.4 helix-turn-helix transcriptional regulator compare
MMP_RS04090 +0.5 0.7 hypothetical protein compare
MMP_RS01095 +0.5 1.8 iron ABC transporter permease compare
MMP_RS04060 +0.5 1.7 hypothetical protein compare
MMP_RS05830 +0.5 1.3 peptidyl-prolyl cis-trans isomerase compare
MMP_RS08640 +0.5 2.0 TIM barrel protein compare
MMP_RS00635 +0.5 1.8 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS07550 +0.4 2.4 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS06575 +0.4 1.4 fluoride efflux transporter CrcB compare
MMP_RS06445 +0.4 1.7 DUF89 domain-containing protein compare
MMP_RS08250 +0.4 2.4 pyruvate kinase compare
MMP_RS05970 +0.4 1.9 class II SORL domain-containing protein compare
MMP_RS07085 +0.4 1.7 ribonuclease HII compare
MMP_RS03675 +0.4 2.0 RimK family alpha-L-glutamate ligase compare
MMP_RS07905 +0.4 1.5 DUF3343 domain-containing protein compare
MMP_RS08400 +0.4 1.5 MJ0307 family thioredoxin compare
MMP_RS00865 +0.4 1.9 SLC13 family permease compare
MMP_RS07850 +0.4 0.8 prephenate dehydratase compare
MMP_RS06920 +0.4 1.7 AAA family ATPase compare
MMP_RS00825 +0.4 0.7 fumarylacetoacetate hydrolase family protein compare
MMP_RS08455 +0.4 0.9 multiprotein bridging factor aMBF1 compare
MMP_RS03840 +0.4 1.4 hypothetical protein compare
MMP_RS02480 +0.4 0.8 hypothetical protein compare
MMP_RS05695 +0.4 1.4 phospholipase D-like domain-containing protein compare
MMP_RS07890 +0.4 0.7 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS08940 +0.4 0.4 MetS family NSS transporter small subunit compare
MMP_RS00910 +0.4 1.9 2-phosphosulfolactate phosphatase compare
MMP_RS02100 +0.4 1.2 metallophosphoesterase compare
MMP_RS05660 +0.4 1.4 phosphate ABC transporter substrate-binding protein compare
MMP_RS01655 +0.4 0.6 DsrE family protein compare
MMP_RS02020 +0.4 1.4 gamma-glutamylcyclotransferase compare
MMP_RS08625 +0.4 1.9 type II/IV secretion system ATPase subunit compare
MMP_RS03845 +0.4 1.8 DNA adenine methylase compare
MMP_RS08410 +0.4 1.1 DUF169 domain-containing protein compare
MMP_RS08555 +0.4 0.8 hypothetical protein compare
MMP_RS08200 +0.4 2.1 archaeosine synthase subunit alpha compare
MMP_RS03780 +0.4 1.8 4Fe-4S binding protein compare
MMP_RS03820 +0.4 1.3 EamA family transporter compare
MMP_RS03655 +0.4 1.3 DUF1894 domain-containing protein compare
MMP_RS05580 +0.4 2.9 glycosyltransferase compare
MMP_RS08670 +0.4 1.5 metallophosphoesterase compare
MMP_RS00960 +0.4 1.3 iron export ABC transporter permease subunit FetB compare
MMP_RS00185 +0.4 2.3 potassium channel protein compare
MMP_RS00930 +0.4 1.0 ABC transporter permease compare
MMP_RS01210 +0.4 1.6 sodium:solute symporter compare
MMP_RS08235 +0.3 0.8 hypothetical protein compare
MMP_RS01620 +0.3 0.7 hypothetical protein compare
MMP_RS00570 +0.3 0.6 protein-L-isoaspartate O-methyltransferase compare
MMP_RS00630 +0.3 1.9 ECF transporter S component compare
MMP_RS00395 +0.3 0.5 MGMT family protein compare
MMP_RS01080 +0.3 1.6 DUF2202 domain-containing protein compare
MMP_RS08945 +0.3 1.5 hypothetical protein compare
MMP_RS04015 +0.3 0.7 hypothetical protein compare
MMP_RS08080 +0.3 1.6 YchF/TatD family DNA exonuclease compare
MMP_RS03305 +0.3 1.6 winged helix-turn-helix domain-containing protein compare
MMP_RS05720 +0.3 0.7 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS01660 +0.3 0.8 hypothetical protein compare
MMP_RS02645 +0.3 1.3 ArsR family transcriptional regulator compare
MMP_RS07100 +0.3 1.9 hypothetical protein compare
MMP_RS06990 +0.3 0.9 CatB-related O-acetyltransferase compare
MMP_RS08845 +0.3 1.3 archaellum operon transcriptional activator EarA family protein compare
MMP_RS01495 +0.3 1.4 TraB/GumN family protein compare
MMP_RS05900 +0.3 1.4 tetratricopeptide repeat protein compare
MMP_RS03775 +0.3 0.9 4Fe-4S dicluster domain-containing protein compare
MMP_RS08090 +0.3 1.1 hypothetical protein compare
MMP_RS05020 +0.3 1.3 hypothetical protein compare
MMP_RS06335 +0.3 1.0 HAD family hydrolase compare
MMP_RS03215 +0.3 1.4 MBL fold metallo-hydrolase compare
MMP_RS03220 +0.3 0.6 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS07560 +0.3 0.8 prefoldin subunit alpha compare
MMP_RS01185 +0.3 1.1 hypothetical protein compare
MMP_RS09050 +0.3 1.0 CAP domain-containing protein compare
MMP_RS07590 +0.3 1.6 hypothetical protein compare
MMP_RS07895 +0.3 0.8 cytochrome c compare
MMP_RS06250 +0.3 1.2 hypothetical protein compare
MMP_RS05600 +0.3 2.1 AglZ/HisF2 family acetamidino modification protein compare
MMP_RS07155 +0.3 1.1 MFS transporter compare
MMP_RS07800 +0.3 1.3 ATP-binding cassette domain-containing protein compare
MMP_RS00375 +0.3 1.5 ammonium transporter compare
MMP_RS04610 +0.3 1.0 Dabb family protein compare
MMP_RS08245 +0.3 1.7 DUF4013 domain-containing protein compare
MMP_RS06735 +0.3 0.7 class I SAM-dependent rRNA methyltransferase compare
MMP_RS08085 +0.3 1.6 hypothetical protein compare
MMP_RS02840 +0.3 0.9 DUF123 domain-containing protein compare
MMP_RS00235 +0.3 1.2 HDIG domain-containing protein compare
MMP_RS04845 +0.3 1.6 CheF family chemotaxis protein compare
MMP_RS02565 +0.3 1.1 hypothetical protein compare
MMP_RS04145 +0.3 0.4 hypothetical protein compare
MMP_RS06650 +0.3 1.0 glycoside hydrolase family 57 protein compare
MMP_RS08310 +0.3 0.5 TMEM165/GDT1 family protein compare
MMP_RS02455 +0.3 0.8 hypothetical protein compare
MMP_RS02770 +0.3 0.6 hypothetical protein compare
MMP_RS02675 +0.3 0.7 hypothetical protein compare
MMP_RS01255 +0.3 1.1 amino acid ABC transporter ATP-binding protein compare
MMP_RS03385 +0.3 0.3 cation diffusion facilitator family transporter compare
MMP_RS01055 +0.3 0.7 hypothetical protein compare
MMP_RS01690 +0.3 1.3 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS05820 +0.3 0.9 RNA-binding transcriptional accessory protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments

For nutrient t2 Mc_vitamins across organisms