Experiment set5IT020 for Dechlorosoma suillum PS

Compare to:

ALP with Sodium nitrite 0.45 mM

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2809 +2.0 0.9 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0920 +1.0 0.6 fructose-2,6-bisphosphatase compare
Dsui_2891 +1.0 0.4 hemerythrin-like metal-binding domain-containing protein compare
Dsui_1752 +0.9 1.5 flagellar export protein FliJ compare
Dsui_1932 +0.8 0.8 transcriptional regulator compare
Dsui_2199 +0.8 2.4 bacterial nucleoid DNA-binding protein compare
Dsui_2188 +0.8 6.7 Protein of unknown function (DUF3460) compare
Dsui_2138 +0.8 4.1 putative esterase compare
Dsui_0738 +0.8 0.9 secondary thiamine-phosphate synthase enzyme compare
Dsui_1964 +0.8 3.7 integration host factor, alpha subunit compare
Dsui_1976 +0.8 5.0 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_2131 +0.7 5.9 tRNA-Arg compare
Dsui_1956 +0.7 5.8 Rhodanese-related sulfurtransferase compare
Dsui_0927 +0.7 1.2 cytochrome c551/c552 compare
Dsui_1928 +0.7 1.0 cytochrome c, mono- and diheme variants family compare
Dsui_2380 +0.7 1.8 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase compare
Dsui_1875 +0.7 2.5 hypothetical protein compare
Dsui_0658 +0.7 2.6 chemotaxis signal transduction protein compare
Dsui_2256 +0.7 5.5 flavodoxin reductase family protein compare
Dsui_3091 +0.7 3.2 integral membrane protein, TerC family compare
Dsui_2103 +0.6 4.2 hypothetical protein compare
Dsui_2590 +0.6 1.4 Pilin accessory protein (PilO) compare
Dsui_2744 +0.6 0.8 Protein of unknown function (DUF1236) compare
Dsui_0613 +0.6 0.9 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_3090 +0.6 2.7 hypothetical protein compare
Dsui_2873 +0.6 1.7 Peroxiredoxin compare
Dsui_1967 +0.6 5.9 DNA-binding protein H-NS compare
Dsui_2151 +0.6 2.7 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_2315 +0.6 2.8 Stress responsive A/B Barrel Domain-containing protein compare
Dsui_2180 +0.6 3.1 hypothetical protein compare
Dsui_0796 +0.6 2.5 hypothetical protein compare
Dsui_2059 +0.6 3.3 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_1999 +0.6 1.4 putative translation initiation inhibitor, yjgF family compare
Dsui_2023 +0.6 4.8 transcriptional regulator compare
Dsui_1412 +0.6 1.9 chromate transport protein ChrA compare
Dsui_2069 +0.6 2.3 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2061 +0.6 4.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_3446 +0.6 3.3 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase compare
Dsui_2331 +0.6 2.0 heat shock protein compare
Dsui_2007 +0.6 0.3 putative solute:sodium symporter small subunit compare
Dsui_2068 +0.5 2.8 ABC-type metal ion transport system, ATPase component compare
Dsui_2186 +0.5 2.2 Protein of unknown function (DUF3567) compare
Dsui_2053 +0.5 0.6 HNH endonuclease compare
Dsui_2259 +0.5 2.3 hypothetical protein compare
Dsui_2066 +0.5 3.7 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Dsui_1987 +0.5 3.8 putative permease compare
Dsui_2221 +0.5 3.8 putative ATPase compare
Dsui_1995 +0.5 3.5 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_2235 +0.5 2.7 hypothetical protein compare
Dsui_1016 +0.5 2.3 tRNA (guanine-N(7)-)-methyltransferase compare
Dsui_0544 +0.5 1.4 flagellar basal body-associated protein compare
Dsui_3444 +0.5 3.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
Dsui_1946 +0.5 4.0 putative N-acetylglucosaminyl transferase compare
Dsui_2964 +0.5 1.0 precorrin-2 C20-methyltransferase compare
Dsui_3445 +0.5 3.4 hypothetical protein compare
Dsui_2108 +0.5 3.4 superfamily II helicase compare
Dsui_1873 +0.5 3.5 transcriptional regulator compare
Dsui_1971 +0.5 3.3 RNA polymerase sigma factor RpoS compare
Dsui_2977 +0.5 2.7 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1911 +0.5 2.3 ParB-like partition protein compare
Dsui_0985 +0.5 3.3 putative Fe-S protein compare
Dsui_2532 +0.5 2.3 tripartite ATP-independent periplasmic transporter solute receptor, DctP family compare
Dsui_2955 +0.5 2.1 cobalamin biosynthesis protein CbiM compare
Dsui_1908 +0.5 3.5 putative Fe-S-cluster redox enzyme compare
Dsui_2156 +0.5 3.7 methyl-accepting chemotaxis protein compare
Dsui_2181 +0.5 1.4 DNA-binding domain-containing protein, AraC-type compare
Dsui_2154 +0.5 2.3 molybdopterin converting factor, large subunit compare
Dsui_2430 +0.5 2.5 tRNA-Asn compare
Dsui_1050 +0.4 3.2 signal transduction histidine kinase, nitrogen specific compare
Dsui_3290 +0.4 1.6 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_2902 +0.4 0.8 hypothetical protein compare
Dsui_1981 +0.4 3.4 23S rRNA (uracil-5-)-methyltransferase RumA compare
Dsui_0538 +0.4 1.0 hypothetical protein compare
Dsui_1590 +0.4 1.0 hypothetical protein compare
Dsui_1541 +0.4 2.3 cytochrome c553 compare
Dsui_3383 +0.4 2.3 cAMP-binding protein compare
Dsui_2070 +0.4 2.2 transcriptional regulator compare
Dsui_1869 +0.4 3.5 hypothetical protein compare
Dsui_2140 +0.4 2.9 hypothetical protein compare
Dsui_2659 +0.4 3.8 cold shock protein compare
Dsui_1945 +0.4 2.0 uncharacterized integral membrane protein compare
Dsui_2058 +0.4 3.1 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2260 +0.4 0.7 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_2680 +0.4 2.9 ribonuclease HII compare
Dsui_2159 +0.4 3.0 methyl-accepting chemotaxis protein compare
Dsui_2257 +0.4 2.7 transcriptional regulator compare
Dsui_1876 +0.4 3.7 transcriptional regulator compare
Dsui_1979 +0.4 2.3 metal-dependent hydrolase, beta-lactamase superfamily I compare
Dsui_0051 +0.4 2.1 cob(II)yrinic acid a,c-diamide reductase compare
Dsui_3209 +0.4 1.9 putative esterase of the alpha/beta hydrolase fold protein compare
Dsui_1502 +0.4 1.5 putative membrane protein compare
Dsui_3332 +0.4 2.7 glutathione S-transferase compare
Dsui_2039 +0.4 2.9 OAH/OAS sulfhydrylase compare
Dsui_2057 +0.4 2.3 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2208 +0.4 2.8 citrate lyase beta subunit compare
Dsui_1003 +0.4 3.6 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_2148 +0.4 3.0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3327 +0.4 1.9 cytochrome b compare
Dsui_0471 +0.4 0.9 cobalamin 5''-phosphate synthase/cobalamin synthase compare
Dsui_1902 +0.4 3.4 alkyl hydroperoxide reductase, F subunit compare
Dsui_2956 +0.4 1.0 ABC-type cobalt transport system, periplasmic component compare
Dsui_1540 +0.4 2.8 NAD(FAD)-dependent dehydrogenase compare
Dsui_2223 +0.4 2.8 putative ATP-dependent protease compare
Dsui_3083 +0.4 2.7 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_1843 +0.4 1.1 hypothetical protein compare
Dsui_2730 +0.4 3.0 Sua5/YciO/YrdC/YwlC family protein compare
Dsui_1937 +0.4 2.7 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_2378 +0.4 1.5 hypothetical protein compare
Dsui_2003 +0.4 2.7 acetate--CoA ligase compare
Dsui_2771 +0.4 3.1 hypothetical protein compare
Dsui_2761 +0.4 1.8 hypothetical protein compare
Dsui_2745 +0.4 0.6 methyl-accepting chemotaxis protein compare
Dsui_2498 +0.4 0.2 mercuric resistance transcriptional repressor protein MerD compare
Dsui_3253 +0.4 1.7 Protein of unknown function (DUF3579) compare
Dsui_3291 +0.4 2.6 hypothetical protein compare
Dsui_1106 +0.4 1.6 nitroreductase compare
Dsui_2098 +0.4 1.0 hypothetical protein compare
Dsui_2435 +0.4 2.1 protein-tyrosine-phosphatase compare
Dsui_2976 +0.4 2.1 Fe2+-dicitrate sensor, membrane component compare
Dsui_0409 +0.4 2.3 RND family efflux transporter, MFP subunit compare
Dsui_2293 +0.4 0.4 poly(3-hydroxyalkanoate) synthetase compare
Dsui_2040 +0.4 1.0 putative CoA-binding protein compare
Dsui_1430 +0.4 2.0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2067 +0.4 2.1 ABC-type metal ion transport system, permease component compare
Dsui_2613 +0.3 1.7 integrating conjugative element protein, PFL_4669 family compare
Dsui_2778 +0.3 1.0 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase compare
Dsui_3144 +0.3 1.9 type IV pilus biogenesis/stability protein PilW compare
Dsui_2161 +0.3 2.8 ATP-dependent chaperone ClpB compare
Dsui_3415 +0.3 2.6 FAD/FMN-dependent dehydrogenase compare
Dsui_1005 +0.3 1.7 tRNA-Gly compare
Dsui_2804 +0.3 2.6 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1745 +0.3 2.7 flagellar biosynthetic protein FliQ compare
Dsui_2909 +0.3 2.8 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0220 +0.3 1.9 2-phosphoglycolate phosphatase compare
Dsui_1703 +0.3 2.0 ADP-ribose pyrophosphatase compare
Dsui_2746 +0.3 2.9 ATP-binding cassette protein, ChvD family compare
Dsui_1375 +0.3 0.9 putative nuleotide-utilizing enzyme, moeA compare
Dsui_2343 +0.3 2.9 transcriptional regulator compare
Dsui_2026 +0.3 0.9 hydrophobe/amphiphile efflux-1 (HAE1) family transporter compare
Dsui_2500 +0.3 1.6 site-specific recombinase, DNA invertase Pin compare
Dsui_1858 +0.3 2.3 transcriptional regulator compare
Dsui_0788 +0.3 1.6 phosphosulfolactate phosphohydrolase-like enzyme compare
Dsui_3375 +0.3 0.8 hypothetical protein compare
Dsui_1004 +0.3 0.9 conserved protein of DIM6/NTAB family compare
Dsui_2176 +0.3 0.2 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1901 +0.3 2.2 peroxiredoxin compare
Dsui_3154 +0.3 2.0 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_2639 +0.3 0.2 putative metal-binding protein compare
Dsui_0657 +0.3 2.4 methyl-accepting chemotaxis protein compare
Dsui_2511 +0.3 0.8 response regulator compare
Dsui_2829 +0.3 2.6 hypothetical protein compare
Dsui_0287 +0.3 0.5 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_0228 +0.3 2.2 metalloendopeptidase-like membrane protein compare
Dsui_1862 +0.3 2.3 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2797 +0.3 2.5 LysM repeat-containing protein compare
Dsui_2911 +0.3 0.5 cation/cationic drug transporter compare
Dsui_2222 +0.3 2.3 type II secretory pathway, component PulD compare
Dsui_0024 +0.3 1.1 cytochrome c556 compare
Dsui_0230 +0.3 1.5 hypothetical protein compare
Dsui_3416 +0.3 0.8 transcriptional regulator compare
Dsui_0425 +0.3 0.9 putative Fe-S oxidoreductase compare
Dsui_1722 +0.3 2.7 flagellar biosynthetic protein FlhB compare
Dsui_1750 +0.3 2.0 flagellar basal body-associated protein compare
Dsui_1726 +0.3 2.2 RNA polymerase sigma factor, FliA/WhiG family compare
Dsui_1747 +0.3 1.3 flagellar biosynthetic protein FliO compare
Dsui_2326 +0.3 0.5 hypothetical protein compare
Dsui_2265 +0.3 0.6 DNA-directed DNA polymerase III PolC compare
Dsui_2959 +0.3 0.6 precorrin-4 C11-methyltransferase compare
Dsui_0261 +0.3 2.3 sulfate/thiosulfate-binding protein compare
Dsui_2614 +0.3 0.2 hypothetical protein compare
Dsui_1221 +0.3 1.9 hypothetical protein compare
Dsui_2757 +0.3 0.8 spermidine synthase compare
Dsui_2000 +0.3 1.5 hypothetical protein compare
Dsui_0990 +0.3 0.4 putative P-loop-containing kinase compare
Dsui_1055 +0.3 1.6 sporulation related protein compare
Dsui_2652 +0.3 1.8 hydrolase, TatD family compare
Dsui_2149 +0.3 2.1 DNA helicase, Rad3 compare
Dsui_3233 +0.3 1.3 hypothetical protein compare
Dsui_2653 +0.3 2.4 Tfp pilus assembly protein PilZ compare
Dsui_3130 +0.3 0.8 tRNA-Leu compare
Dsui_2958 +0.3 1.1 cobalt transport protein ATP-binding subunit compare
Dsui_1040 +0.3 1.7 glutamyl-queuosine tRNA(Asp) synthetase compare
Dsui_1881 +0.3 2.1 methyl-accepting chemotaxis protein compare
Dsui_1164 +0.3 1.5 hydrogenase nickel insertion protein HypA compare
Dsui_2582 +0.3 0.8 hypothetical protein compare
Dsui_3070 +0.3 1.9 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_3289 +0.3 0.7 hypothetical protein compare
Dsui_2396 +0.3 1.9 putative domain HDIG-containing protein compare
Dsui_3309 +0.3 2.1 nitrous oxide reductase compare
Dsui_1291 +0.3 1.7 hypothetical protein compare
Dsui_3194 +0.3 0.8 pseudouridylate synthase I compare
Dsui_2831 +0.3 2.5 hypothetical protein compare
Dsui_0405 +0.3 1.9 type I secretion outer membrane protein, TolC family compare
Dsui_1646 +0.3 1.5 cAMP-binding protein compare
Dsui_1606 +0.3 1.3 periplasmic serine protease, Do/DeqQ family compare
Dsui_3436 +0.3 0.5 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase compare
Dsui_0322 +0.3 1.7 acyl-CoA hydrolase compare
Dsui_0045 +0.3 1.0 glutaredoxin-like protein compare
Dsui_1723 +0.3 2.3 flagellar biosynthesis protein FlhA compare
Dsui_0684 +0.3 2.1 putative nucleoside-diphosphate sugar epimerase compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in stress experiments

For stress Sodium nitrite across organisms