Experiment set4IT085 for Synechococcus elongatus PCC 7942

Compare to:

Doxycycline hyclate 0.00078125 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Synpcc7942_2182 +1.4 1.5 hypothetical protein compare
Synpcc7942_1538 +1.3 1.7 hypothetical protein compare
Synpcc7942_0014 +1.3 2.8 hypothetical protein compare
Synpcc7942_0291 +1.2 2.4 hypothetical protein compare
Synpcc7942_B2633 +1.2 10.5 hypothetical protein compare
Synpcc7942_1655 +1.0 2.7 hypothetical protein compare
Synpcc7942_1023 +1.0 3.7 hypothetical protein compare
Synpcc7942_1362 +1.0 5.2 hypothetical protein compare
Synpcc7942_1221 cheY +0.9 2.6 response regulator receiver domain protein (CheY-like) compare
Synpcc7942_1997 hliA +0.8 1.6 high light-inducible protein compare
Synpcc7942_1134 +0.8 1.6 hypothetical protein compare
Synpcc7942_2336 +0.8 2.1 hypothetical protein compare
Synpcc7942_1016 cheW +0.8 3.0 CheW protein compare
Synpcc7942_1541 isiB +0.8 2.3 flavodoxin FldA compare
Synpcc7942_0436 +0.7 1.5 hypothetical protein compare
Synpcc7942_0402 +0.7 0.7 hypothetical protein compare
Synpcc7942_1739 merR +0.7 1.5 transcriptional regulator, MerR family compare
Synpcc7942_1210 +0.7 0.7 hypothetical protein compare
Synpcc7942_1991 mscL +0.7 1.4 large conductance mechanosensitive channel protein compare
Synpcc7942_1812 +0.7 2.6 hypothetical protein compare
Synpcc7942_0243 hliC +0.7 0.7 possible high light inducible polypeptide HliC compare
Synpcc7942_1904 hlyD +0.7 2.5 hemolysin secretion protein-like compare
Synpcc7942_0721 +0.6 3.0 hypothetical protein compare
Synpcc7942_1880 +0.6 1.2 hypothetical protein compare
Synpcc7942_2529 gifB +0.6 2.6 hypothetical protein compare
Synpcc7942_0432 +0.6 3.7 D-alanyl-D-alanine dipeptidase-like compare
Synpcc7942_1348 +0.6 2.7 hypothetical protein compare
Synpcc7942_1485 +0.6 1.6 hypothetical protein compare
Synpcc7942_2456 +0.6 2.9 hypothetical protein compare
Synpcc7942_0207 +0.6 1.0 hypothetical protein compare
Synpcc7942_0880 +0.6 4.0 hypothetical protein compare
Synpcc7942_1567 +0.6 2.2 possible ribosomal protein L36 compare
Synpcc7942_0001 dnaN +0.6 3.4 DNA polymerase III subunit beta compare
Synpcc7942_1213 +0.6 2.8 virulence associated protein C compare
Synpcc7942_2347 +0.6 3.7 hypothetical protein compare
Synpcc7942_0906 +0.6 0.7 hypothetical protein compare
Synpcc7942_0477 ylmG +0.6 0.6 conserved hypothetical protein YCF19 compare
Synpcc7942_0223 +0.6 2.6 hypothetical protein compare
Synpcc7942_0638 gloA +0.6 2.3 Glyoxalase I compare
Synpcc7942_0668 +0.6 1.3 hypothetical protein compare
Synpcc7942_0123 +0.5 1.0 hypothetical protein compare
Synpcc7942_0508 +0.5 4.0 geranylgeranyl reductase compare
Synpcc7942_0945 +0.5 2.3 hypothetical protein compare
Synpcc7942_0470 +0.5 3.0 hypothetical protein compare
Synpcc7942_0905 +0.5 1.9 hypothetical protein compare
Synpcc7942_1539 +0.5 2.6 hypothetical protein compare
Synpcc7942_1458 +0.5 3.2 hypothetical protein compare
Synpcc7942_0383 +0.5 2.1 hypothetical protein compare
Synpcc7942_1634 +0.5 0.8 hypothetical protein compare
Synpcc7942_0377 rpoD4 +0.5 2.3 hypothetical protein compare
Synpcc7942_0983 deoC +0.5 3.1 deoxyribose-phosphate aldolase compare
Synpcc7942_1167 +0.5 2.8 hypothetical protein compare
Synpcc7942_2152 +0.5 2.8 hypothetical protein compare
Synpcc7942_0940 +0.5 1.3 transcriptional regulator, XRE family compare
Synpcc7942_2349 pilT +0.5 2.4 twitching motility protein compare
Synpcc7942_2380 +0.5 3.0 hypothetical protein compare
Synpcc7942_1571 smpX +0.5 1.9 MIP family channel proteins compare
Synpcc7942_1246 crtiso +0.5 3.1 carotene isomerase compare
Synpcc7942_1364 +0.5 1.6 hypothetical protein compare
Synpcc7942_1279 +0.5 1.8 hypothetical protein compare
Synpcc7942_2187 +0.5 2.2 hypothetical protein compare
Synpcc7942_1784 sigF2 +0.5 2.7 RNA polymerase sigma factor SigF compare
Synpcc7942_1498 +0.5 1.7 hypothetical protein compare
Synpcc7942_1056 +0.5 2.5 transcriptional regulator, XRE family compare
Synpcc7942_2083 +0.5 0.4 Multiple antibiotic resistance (MarC)-related proteins compare
Synpcc7942_0286 +0.5 2.7 hypothetical protein compare
Synpcc7942_1112 +0.5 3.0 ribosomal large subunit pseudouridine synthase D compare
Synpcc7942_2395 +0.5 1.6 hypothetical protein compare
Synpcc7942_0138 +0.4 2.6 Membrane proteins, metalloendopeptidase-like compare
Synpcc7942_0857 +0.4 2.2 CheW protein compare
Synpcc7942_1302 +0.4 1.5 hypothetical protein compare
Synpcc7942_0845 +0.4 1.5 hypothetical protein compare
Synpcc7942_0177 +0.4 2.4 ABC-type uncharacterized transport system permease component-like compare
Synpcc7942_2038 +0.4 1.5 transcriptional regulator, XRE family with cupin sensor domain compare
Synpcc7942_0451 +0.4 2.3 esterase compare
Synpcc7942_0767 +0.4 2.7 hypothetical protein compare
Synpcc7942_1398 +0.4 2.1 Cellulose synthase (UDP-forming) compare
Synpcc7942_0437 +0.4 1.0 putative glutathione peroxidase compare
Synpcc7942_1587 +0.4 2.0 integral membrane protein-like compare
Synpcc7942_1914 +0.4 1.9 hypothetical protein compare
Synpcc7942_1933 fni +0.4 2.7 isopentenyl pyrophosphate isomerase compare
Synpcc7942_1442 +0.4 2.1 hypothetical protein compare
Synpcc7942_2106 cynB +0.4 1.4 nitrate transport permease compare
Synpcc7942_1603 ampC +0.4 2.3 beta-lactamase compare
Synpcc7942_0500 +0.4 2.4 hypothetical protein compare
Synpcc7942_1361 +0.4 1.9 hypothetical protein compare
Synpcc7942_0431 +0.4 2.9 hypothetical protein compare
Synpcc7942_1483 +0.4 1.9 hypothetical protein compare
Synpcc7942_1518 pcrA +0.4 3.0 ATP-dependent helicase PcrA compare
Synpcc7942_2107 cynA +0.4 2.4 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like compare
Synpcc7942_1120 +0.4 1.0 hypothetical protein compare
Synpcc7942_1394 +0.4 2.8 PDZ/DHR/GLGF compare
Synpcc7942_0690 clpS +0.4 1.1 ATP-dependent Clp protease adaptor protein ClpS compare
Synpcc7942_0371 metA +0.4 1.2 homoserine O-succinyltransferase compare
Synpcc7942_0797 +0.4 1.1 hypothetical protein compare
Synpcc7942_1535 rbcX +0.4 1.5 possible Rubisco chaperonin compare
Synpcc7942_1025 +0.4 1.1 TPR repeat compare
Synpcc7942_1317 mntA +0.4 1.6 ATPase compare
Synpcc7942_1905 hlyB +0.4 2.5 cyclic nucleotide-binding domain (cNMP-BD) protein compare
Synpcc7942_0522 +0.4 1.5 hypothetical protein compare
Synpcc7942_1061 +0.4 1.8 hypothetical protein compare
Synpcc7942_0265 +0.4 1.7 hypothetical protein compare
Synpcc7942_1084 +0.4 1.2 hypothetical protein compare
Synpcc7942_1130 +0.4 3.0 protein serine/threonine phosphatase compare
Synpcc7942_1556 +0.4 1.9 hypothetical protein compare
Synpcc7942_1728 +0.4 2.4 hypothetical protein compare
Synpcc7942_0630 +0.4 2.4 hypothetical protein compare
Synpcc7942_2157 +0.4 0.8 hypothetical protein compare
Synpcc7942_1365 +0.4 1.4 Multiple antibiotic resistance (MarC)-related proteins compare
Synpcc7942_0938 +0.4 1.9 transcriptional regulator, ArsR family compare
Synpcc7942_2379 thiD +0.4 1.9 phosphomethylpyrimidine kinase compare
Synpcc7942_1859 +0.3 2.3 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) compare
Synpcc7942_1339 +0.3 1.4 hypothetical protein compare
Synpcc7942_0515 +0.3 2.1 hypothetical protein compare
Synpcc7942_0457 +0.3 1.5 hypothetical protein compare
Synpcc7942_2018 +0.3 0.7 hypothetical protein compare
Synpcc7942_2158 apcF +0.3 1.9 allophycocyanin, beta subunit compare
Synpcc7942_1918 BGluT +0.3 2.6 UDP-glucose:tetrahydrobiopterin glucosyltransferase compare
Synpcc7942_1688 cysW +0.3 1.8 Sulfate ABC transporter, permease protein CysW compare
Synpcc7942_0882 lon +0.3 1.4 Peptidase S16, lon-like compare
Synpcc7942_0879 rhnB +0.3 1.6 RNase HII compare
Synpcc7942_0481 +0.3 1.6 protease compare
Synpcc7942_2523 +0.3 0.6 hypothetical protein compare
Synpcc7942_0002 +0.3 2.4 hypothetical protein compare
Synpcc7942_1370 +0.3 1.7 hypothetical protein compare
Synpcc7942_0476 clpS +0.3 1.4 ATP-dependent Clp protease adaptor compare
Synpcc7942_1328 +0.3 1.8 hypothetical protein compare
Synpcc7942_1806 prxQ-A2 +0.3 1.4 bacterioferritin comigratory protein compare
Synpcc7942_1132 +0.3 1.6 hypothetical protein compare
Synpcc7942_2424 +0.3 2.1 hypothetical protein compare
Synpcc7942_1321 +0.3 2.2 hypothetical protein compare
Synpcc7942_0358 dc13 +0.3 1.2 tRNA (guanine-N(7))-methyltransferase compare
Synpcc7942_1573 +0.3 1.7 3-oxoacyl-(acyl-carrier protein) reductase compare
Synpcc7942_2470 +0.3 1.9 hypothetical protein compare
Synpcc7942_0652 +0.3 2.5 hypothetical protein compare
Synpcc7942_1889 +0.3 2.3 hypothetical protein compare
Synpcc7942_0447 nth +0.3 1.2 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III compare
Synpcc7942_1371 corA +0.3 2.1 magnesium and cobalt transport protein CorA compare
Synpcc7942_0038 mutT +0.3 0.9 mutator MutT protein compare
Synpcc7942_1205 +0.3 1.7 phage_integrase-like compare
Synpcc7942_0445 oppC +0.3 1.9 ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like compare
Synpcc7942_1526 +0.3 1.5 hypothetical protein compare
Synpcc7942_0167 +0.3 1.0 hypothetical protein compare
Synpcc7942_2549 +0.3 0.9 hypothetical protein compare
Synpcc7942_2528 +0.3 1.9 hypothetical protein compare
Synpcc7942_2474 +0.3 1.4 hypothetical protein compare
Synpcc7942_1873 +0.3 1.1 two component transcriptional regulator, winged helix family compare
Synpcc7942_2176 dpsA +0.3 2.3 hypothetical protein compare
Synpcc7942_1506 +0.3 1.4 hypothetical protein compare
Synpcc7942_0081 +0.3 0.9 RNA-binding S4 compare
Synpcc7942_0317 +0.3 1.5 hypothetical protein compare
Synpcc7942_2256 +0.3 2.0 hypothetical protein compare
Synpcc7942_B2620 srpA +0.3 2.0 putative catalase compare
Synpcc7942_1381 +0.3 1.6 ATPase compare
Synpcc7942_1504 +0.3 1.3 hypothetical protein compare
Synpcc7942_1214 gpx1 +0.3 1.9 Glutathione peroxidase compare
Synpcc7942_1399 +0.3 1.3 hypothetical protein compare
Synpcc7942_0754 +0.3 1.1 hypothetical protein compare
Synpcc7942_1420 chlN +0.3 2.1 light-independent protochlorophyllide reductase subunit N compare
Synpcc7942_2016 psbX +0.3 0.8 photosystem II PsbX protein compare
Synpcc7942_1287 +0.3 1.5 VCBS compare
Synpcc7942_0415 +0.3 1.7 hypothetical protein compare
Synpcc7942_1902 +0.3 0.4 putative glycosyltransferase compare
Synpcc7942_1823 nblB +0.3 1.2 PBS lyase HEAT-like repeat compare
Synpcc7942_0495 +0.3 0.7 hypothetical protein compare
Synpcc7942_1749 fer +0.3 1.2 ferredoxin compare
Synpcc7942_2556 hoxY +0.3 1.5 NAD-reducing hydrogenase HoxS delta subunit compare
Synpcc7942_0948 +0.3 1.8 permease protein of sugar ABC transporter compare
Synpcc7942_0013 +0.3 1.1 hypothetical protein compare
Synpcc7942_1899 +0.3 1.6 hypothetical protein compare
Synpcc7942_0787 phoA +0.3 2.1 putative purple acid phosphatase compare
Synpcc7942_2101 rfbA +0.3 1.3 glucose-1-phosphate thymidylyltransferase compare
Synpcc7942_1979 +0.3 1.7 membrane protein-like compare
Synpcc7942_0462 +0.3 1.6 hypothetical protein compare
Synpcc7942_2427 +0.3 1.8 3-mercaptopyruvate sulfurtransferase compare
Synpcc7942_0024 +0.3 2.1 hypothetical protein compare
Synpcc7942_0947 ggtA +0.3 1.8 ATPase compare
Synpcc7942_0575 +0.3 1.5 hypothetical protein compare
Synpcc7942_2360 amiA +0.3 1.6 N-acetylmuramoyl-L-alanine amidase compare
Synpcc7942_0228 +0.3 0.9 hypothetical protein compare
Synpcc7942_0363 +0.3 1.0 hypothetical protein compare
Synpcc7942_1125 +0.3 1.7 putative CheA signal transduction histidine kinase, no good domain identification compare
Synpcc7942_2240 ycf52 +0.3 0.6 conserved hypothetical protein YCF52 compare
Synpcc7942_1553 +0.3 1.8 Phosphoesterase PHP-like compare
Synpcc7942_2104 cynS +0.3 0.8 cyanate hydratase compare
Synpcc7942_0749 +0.3 1.3 hypothetical protein compare
Synpcc7942_2507 +0.3 1.0 hypothetical protein compare
Synpcc7942_1654 +0.3 1.4 hypothetical protein compare
Synpcc7942_0352 +0.3 1.4 Methionine sulfoxide reductase B compare
Synpcc7942_1212 +0.3 1.4 hypothetical protein compare
Synpcc7942_1033 +0.3 1.2 hypothetical protein compare
Synpcc7942_0379 +0.3 0.9 hypothetical protein compare
Synpcc7942_0216 +0.3 1.8 putative zinc-binding oxidoreductase compare
Synpcc7942_2139 +0.3 1.0 probable glutathione S-transferase compare
Synpcc7942_2257 +0.3 0.2 hypothetical protein compare
Synpcc7942_1769 +0.2 1.2 hypothetical protein compare
Synpcc7942_2037 +0.2 1.2 hypothetical protein compare
Synpcc7942_0490 +0.2 1.4 diguanylate cyclase with PAS/PAC sensor compare
Synpcc7942_0342 +0.2 1.0 hypothetical protein compare
Synpcc7942_B2650 +0.2 1.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Synechococcus elongatus PCC 7942 in stress experiments

For stress Doxycycline hyclate across organisms